Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GPCPD1Q9NPB8 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPCPD1Q9NPB8 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPCPD1Q9NPB8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GPCPD1Q9NPB8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPCPD1Q9NPB8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.72■□□□□ 0.27
GPCPD1Q9NPB8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPCPD1Q9NPB8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPCPD1Q9NPB8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPCPD1Q9NPB8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.72■□□□□ 0.27
GPCPD1Q9NPB8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 AC090505.1-201ENST00000430515 1834 ntBASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 RN7SL258P-201ENST00000478664 300 ntBASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GPCPD1Q9NPB8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GPCPD1Q9NPB8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
GPCPD1Q9NPB8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
GPCPD1Q9NPB8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 FAM90A2P-201ENST00000511144 1395 ntBASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 FAM90A25P-201ENST00000528404 1395 ntBASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 KRT17P5-201ENST00000332088 839 ntBASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 RPSAP15-201ENST00000448168 861 ntBASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 PRKXP1-201ENST00000561423 1122 ntBASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 AC093752.3-201ENST00000567343 901 ntBASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 MIR3677-201ENST00000578964 60 ntBASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GPCPD1Q9NPB8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GPCPD1Q9NPB8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms