Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 CDH5-201ENST00000341529 4120 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 CACNA1S-201ENST00000362061 6166 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CHKB-CPT1BH3BT56 AC125807.2-201ENST00000513358 3514 ntBASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 MIR638-201ENST00000385237 100 ntBASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 AC003958.1-201ENST00000435883 421 ntBASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 NCF1B-203ENST00000435988 1254 ntBASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 CD81-212ENST00000526072 1172 ntTSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 AC140113.3-201ENST00000605663 199 ntBASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 LINC01023-201ENST00000606054 436 ntBASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 AC021097.1-201ENST00000607902 574 ntBASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 RPL28-201ENST00000344063 4796 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 RPS6KB1-202ENST00000393021 5479 ntTSL 2 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 SLC25A53-202ENST00000594199 6225 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 FAIM2-201ENST00000320634 4654 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 ARHGEF9-228ENST00000636926 5436 ntTSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 NRXN3-218ENST00000635466 5254 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 EGLN3-205ENST00000547327 2849 ntBASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 INE2-201ENST00000630399 1874 ntBASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 DUSP27-202ENST00000361200 4164 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHKB-CPT1BH3BT56 PBRM1-205ENST00000409057 4980 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MFN2-201ENST00000235329 4539 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 WDR62-201ENST00000270301 4632 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 MKRN5P-201ENST00000445263 1467 ntBASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC7.95□□□□□ -1.14
CHKB-CPT1BH3BT56 AC011498.7-201ENST00000624986 2027 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms