RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
CACNA1S-201ENST00000362061 SUPT5HO00267 1087 aaKnown RBP17.52■□□□□ 0.39
CACNA1S-201ENST00000362061 NISCHQ9Y2I1 1504 aa17.36■□□□□ 0.37
CACNA1S-201ENST00000362061 SHROOM4Q9ULL8 1493 aa17.22■□□□□ 0.35
CACNA1S-201ENST00000362061 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
CACNA1S-201ENST00000362061 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
CACNA1S-201ENST00000362061 APLP2Q06481 763 aa16.86■□□□□ 0.29
CACNA1S-201ENST00000362061 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
CACNA1S-201ENST00000362061 TTBK1Q5TCY1 1321 aaPredicted RBP16.47■□□□□ 0.23
CACNA1S-201ENST00000362061 ATP1B4Q9UN42 357 aaPredicted RBP16.46■□□□□ 0.23
CACNA1S-201ENST00000362061 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
CACNA1S-201ENST00000362061 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
CACNA1S-201ENST00000362061 UBTFP17480 764 aaKnown RBP16.17■□□□□ 0.18
CACNA1S-201ENST00000362061 PCGF6Q9BYE7 350 aa16.08■□□□□ 0.17
CACNA1S-201ENST00000362061 MYT1LQ9UL68 1186 aa16.06■□□□□ 0.16
CACNA1S-201ENST00000362061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
CACNA1S-201ENST00000362061 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
CACNA1S-201ENST00000362061 CCER1Q8TC90 406 aaPredicted RBP15.89■□□□□ 0.14
CACNA1S-201ENST00000362061 CHIC1Q5VXU3 224 aa15.73■□□□□ 0.11
CACNA1S-201ENST00000362061 PPARGC1BQ86YN6 1023 aaKnown RBP15.67■□□□□ 0.1
CACNA1S-201ENST00000362061 ITGAEP38570 1179 aa15.67■□□□□ 0.1
CACNA1S-201ENST00000362061 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
CACNA1S-201ENST00000362061 ERICH6Q7L0X2 663 aa15.64■□□□□ 0.09
CACNA1S-201ENST00000362061 CENPBP07199 599 aaPredicted RBP15.62■□□□□ 0.09
CACNA1S-201ENST00000362061 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
CACNA1S-201ENST00000362061 POLR3GLQ9BT43 218 aa15.61■□□□□ 0.09
CACNA1S-201ENST00000362061 ABCC9O60706 1549 aa15.56■□□□□ 0.08
CACNA1S-201ENST00000362061 NEFLP07196 543 aa15.54■□□□□ 0.08
CACNA1S-201ENST00000362061 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
CACNA1S-201ENST00000362061 FBLN2P98095 1184 aa15.44■□□□□ 0.06
CACNA1S-201ENST00000362061 YTHDC1Q96MU7 727 aaKnown RBP15.44■□□□□ 0.06
CACNA1S-201ENST00000362061 CNGB1Q14028 1251 aaPredicted RBP15.41■□□□□ 0.06
CACNA1S-201ENST00000362061 FAM50AQ14320 339 aaKnown RBP15.26■□□□□ 0.03
CACNA1S-201ENST00000362061 TRIM26Q12899 539 aaPredicted RBP15.25■□□□□ 0.03
CACNA1S-201ENST00000362061 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
CACNA1S-201ENST00000362061 LOC105371045A0A1W2PR82 267 aa15.23■□□□□ 0.03
CACNA1S-201ENST00000362061 DAXXQ9UER7 740 aaPredicted RBP15.18■□□□□ 0.02
CACNA1S-201ENST00000362061 BCANQ96GW7 911 aa15.17■□□□□ 0.02
CACNA1S-201ENST00000362061 ARID3CA6NKF2 412 aa15.07■□□□□ 0
CACNA1S-201ENST00000362061 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
CACNA1S-201ENST00000362061 ESF1Q9H501 851 aaKnown RBP15.06■□□□□ 0
CACNA1S-201ENST00000362061 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
CACNA1S-201ENST00000362061 NEUROD1Q13562 356 aa15.01□□□□□ -0.01
CACNA1S-201ENST00000362061 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
CACNA1S-201ENST00000362061 P3H3Q8IVL6 736 aa15□□□□□ -0.01
CACNA1S-201ENST00000362061 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
CACNA1S-201ENST00000362061 NPM1P06748 294 aaKnown RBP eCLIP14.98□□□□□ -0.01
CACNA1S-201ENST00000362061 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
CACNA1S-201ENST00000362061 HRCP23327 699 aa14.91□□□□□ -0.02
CACNA1S-201ENST00000362061 CDK11AQ9UQ88 783 aaPredicted RBP14.89□□□□□ -0.03
CACNA1S-201ENST00000362061 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
CACNA1S-201ENST00000362061 NEFMP07197 916 aa14.86□□□□□ -0.03
CACNA1S-201ENST00000362061 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
CACNA1S-201ENST00000362061 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
CACNA1S-201ENST00000362061 ZNF316A6NFI3 1004 aaPredicted RBP14.79□□□□□ -0.04
CACNA1S-201ENST00000362061 BCL11AQ9H165 835 aa14.78□□□□□ -0.04
CACNA1S-201ENST00000362061 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
CACNA1S-201ENST00000362061 CANXP27824 592 aaKnown RBP14.72□□□□□ -0.05
CACNA1S-201ENST00000362061 SCRIBQ14160 1630 aa14.71□□□□□ -0.05
CACNA1S-201ENST00000362061 ANP32CO43423 234 aa14.7□□□□□ -0.06
CACNA1S-201ENST00000362061 DIEXFQ68CQ4 756 aaKnown RBP14.67□□□□□ -0.06
CACNA1S-201ENST00000362061 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
CACNA1S-201ENST00000362061 MYT1Q01538 1121 aa14.64□□□□□ -0.07
CACNA1S-201ENST00000362061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
CACNA1S-201ENST00000362061 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
CACNA1S-201ENST00000362061 RTL5Q5HYW3 569 aaPredicted RBP14.56□□□□□ -0.08
CACNA1S-201ENST00000362061 A0A0G2JS52 829 aa14.54□□□□□ -0.08
CACNA1S-201ENST00000362061 TSPY4P0CV99 314 aa14.53□□□□□ -0.08
CACNA1S-201ENST00000362061 TSPY10P0CW01 314 aa14.53□□□□□ -0.08
CACNA1S-201ENST00000362061 CHIC2Q9UKJ5 165 aa14.51□□□□□ -0.09
CACNA1S-201ENST00000362061 KCNH8Q96L42 1107 aa14.5□□□□□ -0.09
CACNA1S-201ENST00000362061 ARID4BQ4LE39 1312 aaPredicted RBP14.48□□□□□ -0.09
CACNA1S-201ENST00000362061 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
CACNA1S-201ENST00000362061 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
CACNA1S-201ENST00000362061 PPP1R15AO75807 674 aaPredicted RBP14.46□□□□□ -0.1
CACNA1S-201ENST00000362061 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
CACNA1S-201ENST00000362061 TONSLQ96HA7 1378 aa14.44□□□□□ -0.1
CACNA1S-201ENST00000362061 ZBTB7CA1YPR0 619 aa14.43□□□□□ -0.1
CACNA1S-201ENST00000362061 NPM2Q86SE8 214 aaKnown RBP14.41□□□□□ -0.1
CACNA1S-201ENST00000362061 KDM2AQ9Y2K7 1162 aa14.39□□□□□ -0.11
CACNA1S-201ENST00000362061 HAP1P54257 671 aaPredicted RBP14.38□□□□□ -0.11
CACNA1S-201ENST00000362061 MTUS2Q5JR59 1369 aa14.38□□□□□ -0.11
CACNA1S-201ENST00000362061 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
CACNA1S-201ENST00000362061 PLEKHD1A6NEE1 506 aa14.37□□□□□ -0.11
CACNA1S-201ENST00000362061 ERCC6Q03468 1493 aa14.34□□□□□ -0.11
CACNA1S-201ENST00000362061 RB1CC1Q8TDY2 1594 aa14.31□□□□□ -0.12
CACNA1S-201ENST00000362061 SALL2Q9Y467 1007 aaPredicted RBP14.29□□□□□ -0.12
CACNA1S-201ENST00000362061 WDR43Q15061 677 aaKnown RBP eCLIP14.26□□□□□ -0.13
CACNA1S-201ENST00000362061 FAM9BQ8IZU0 186 aa14.24□□□□□ -0.13
CACNA1S-201ENST00000362061 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
CACNA1S-201ENST00000362061 TMC1Q8TDI8 760 aa14.23□□□□□ -0.13
CACNA1S-201ENST00000362061 RRP7BPQ9NSQ0 103 aa14.23□□□□□ -0.13
CACNA1S-201ENST00000362061 HSP90AA1P07900 732 aaKnown RBP14.22□□□□□ -0.13
CACNA1S-201ENST00000362061 LMOD2Q6P5Q4 547 aa14.2□□□□□ -0.14
CACNA1S-201ENST00000362061 RGL3Q3MIN7 710 aa14.19□□□□□ -0.14
CACNA1S-201ENST00000362061 DDX10Q13206 875 aaKnown RBP14.19□□□□□ -0.14
CACNA1S-201ENST00000362061 ARXQ96QS3 562 aa14.19□□□□□ -0.14
CACNA1S-201ENST00000362061 CFDP1Q9UEE9 299 aaPredicted RBP14.18□□□□□ -0.14
CACNA1S-201ENST00000362061 HNRNPUQ00839 825 aaKnown RBP eCLIP14.17□□□□□ -0.14
CACNA1S-201ENST00000362061 UPF2Q9HAU5 1272 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms