RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 DCAF8L2P0C7V8 631 aa17.86■□□□□ 0.45
CSNK1A1-201ENST00000261798 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
CSNK1A1-201ENST00000261798 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
CSNK1A1-201ENST00000261798 PELP1Q8IZL8 1130 aaKnown RBP17.24■□□□□ 0.35
CSNK1A1-201ENST00000261798 SHROOM4Q9ULL8 1493 aa17.2■□□□□ 0.34
CSNK1A1-201ENST00000261798 PCGF6Q9BYE7 350 aa17.07■□□□□ 0.32
CSNK1A1-201ENST00000261798 MYT1Q01538 1121 aa16.89■□□□□ 0.29
CSNK1A1-201ENST00000261798 ZEB1P37275 1124 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1-201ENST00000261798 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
CSNK1A1-201ENST00000261798 CENPBP07199 599 aaPredicted RBP16.85■□□□□ 0.29
CSNK1A1-201ENST00000261798 APLP2Q06481 763 aa16.62■□□□□ 0.25
CSNK1A1-201ENST00000261798 HRCP23327 699 aa16.6■□□□□ 0.25
CSNK1A1-201ENST00000261798 FAM9AQ8IZU1 332 aaPredicted RBP16.59■□□□□ 0.25
CSNK1A1-201ENST00000261798 CCER1Q8TC90 406 aaPredicted RBP16.53■□□□□ 0.24
CSNK1A1-201ENST00000261798 ERICH6Q7L0X2 663 aa16.45■□□□□ 0.22
CSNK1A1-201ENST00000261798 TTBK1Q5TCY1 1321 aaPredicted RBP16.41■□□□□ 0.22
CSNK1A1-201ENST00000261798 TRIM26Q12899 539 aaPredicted RBP16.36■□□□□ 0.21
CSNK1A1-201ENST00000261798 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
CSNK1A1-201ENST00000261798 YTHDC1Q96MU7 727 aaKnown RBP16.28■□□□□ 0.2
CSNK1A1-201ENST00000261798 NEFLP07196 543 aa16.22■□□□□ 0.19
CSNK1A1-201ENST00000261798 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
CSNK1A1-201ENST00000261798 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
CSNK1A1-201ENST00000261798 UBTFP17480 764 aaKnown RBP16.03■□□□□ 0.16
CSNK1A1-201ENST00000261798 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
CSNK1A1-201ENST00000261798 RANGAP1P46060 587 aaPredicted RBP15.97■□□□□ 0.15
CSNK1A1-201ENST00000261798 DIEXFQ68CQ4 756 aaKnown RBP15.87■□□□□ 0.13
CSNK1A1-201ENST00000261798 GTF3C3Q9Y5Q9 886 aa15.77■□□□□ 0.11
CSNK1A1-201ENST00000261798 ATP1B4Q9UN42 357 aaPredicted RBP15.74■□□□□ 0.11
CSNK1A1-201ENST00000261798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.74■□□□□ 0.11
CSNK1A1-201ENST00000261798 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
CSNK1A1-201ENST00000261798 ACIN1Q9UKV3 1341 aaKnown RBP15.63■□□□□ 0.09
CSNK1A1-201ENST00000261798 DAXXQ9UER7 740 aaPredicted RBP15.6■□□□□ 0.09
CSNK1A1-201ENST00000261798 RTL5Q5HYW3 569 aaPredicted RBP15.54■□□□□ 0.08
CSNK1A1-201ENST00000261798 ITGAEP38570 1179 aa15.53■□□□□ 0.08
CSNK1A1-201ENST00000261798 ZNF316A6NFI3 1004 aaPredicted RBP15.46■□□□□ 0.07
CSNK1A1-201ENST00000261798 BCANQ96GW7 911 aa15.4■□□□□ 0.06
CSNK1A1-201ENST00000261798 POLR3GLQ9BT43 218 aa15.35■□□□□ 0.05
CSNK1A1-201ENST00000261798 CDK11AQ9UQ88 783 aaPredicted RBP15.33■□□□□ 0.05
CSNK1A1-201ENST00000261798 CLSPNQ9HAW4 1339 aa15.32■□□□□ 0.04
CSNK1A1-201ENST00000261798 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
CSNK1A1-201ENST00000261798 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
CSNK1A1-201ENST00000261798 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
CSNK1A1-201ENST00000261798 ANP32CO43423 234 aa15.25■□□□□ 0.03
CSNK1A1-201ENST00000261798 CNGB1Q14028 1251 aaPredicted RBP15.24■□□□□ 0.03
CSNK1A1-201ENST00000261798 FAM50AQ14320 339 aaKnown RBP15.12■□□□□ 0.01
CSNK1A1-201ENST00000261798 ABCC9O60706 1549 aa15.12■□□□□ 0.01
CSNK1A1-201ENST00000261798 MYT1LQ9UL68 1186 aa15.09■□□□□ 0.01
CSNK1A1-201ENST00000261798 ANP32AP39687 249 aaKnown RBP15.07■□□□□ 0
CSNK1A1-201ENST00000261798 FKBP8Q14318 412 aa15.06■□□□□ 0
CSNK1A1-201ENST00000261798 TRIM52Q96A61 297 aa14.99□□□□□ -0.01
CSNK1A1-201ENST00000261798 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
CSNK1A1-201ENST00000261798 MIER1Q8N108 512 aa14.92□□□□□ -0.02
CSNK1A1-201ENST00000261798 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
CSNK1A1-201ENST00000261798 EIF5BO60841 1220 aaKnown RBP14.9□□□□□ -0.02
CSNK1A1-201ENST00000261798 ANP32EQ9BTT0 268 aa14.86□□□□□ -0.03
CSNK1A1-201ENST00000261798 HNRNPUQ00839 825 aaKnown RBP eCLIP14.85□□□□□ -0.03
CSNK1A1-201ENST00000261798 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
CSNK1A1-201ENST00000261798 DDX10Q13206 875 aaKnown RBP14.84□□□□□ -0.03
CSNK1A1-201ENST00000261798 MYO15BQ96JP2 1530 aa14.83□□□□□ -0.04
CSNK1A1-201ENST00000261798 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
CSNK1A1-201ENST00000261798 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
CSNK1A1-201ENST00000261798 ZBTB47Q9UFB7 747 aaPredicted RBP14.78□□□□□ -0.04
CSNK1A1-201ENST00000261798 NBR1Q14596 966 aa14.77□□□□□ -0.04
CSNK1A1-201ENST00000261798 GLIPR1L2Q4G1C9 344 aa14.77□□□□□ -0.04
CSNK1A1-201ENST00000261798 CCDC180Q9P1Z9 1646 aa14.76□□□□□ -0.05
CSNK1A1-201ENST00000261798 TONSLQ96HA7 1378 aa14.75□□□□□ -0.05
CSNK1A1-201ENST00000261798 CCDC136Q96JN2 1154 aa14.72□□□□□ -0.05
CSNK1A1-201ENST00000261798 CANXP27824 592 aaKnown RBP14.72□□□□□ -0.05
CSNK1A1-201ENST00000261798 FAM9BQ8IZU0 186 aa14.7□□□□□ -0.06
CSNK1A1-201ENST00000261798 ZCCHC6Q5VYS8 1495 aaKnown RBP14.68□□□□□ -0.06
CSNK1A1-201ENST00000261798 ANP32BQ92688 251 aaKnown RBP14.64□□□□□ -0.07
CSNK1A1-201ENST00000261798 IRX6P78412 446 aaPredicted RBP14.61□□□□□ -0.07
CSNK1A1-201ENST00000261798 UPF2Q9HAU5 1272 aaKnown RBP14.61□□□□□ -0.07
CSNK1A1-201ENST00000261798 SUPT16HQ9Y5B9 1047 aaKnown RBP14.6□□□□□ -0.07
CSNK1A1-201ENST00000261798 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
CSNK1A1-201ENST00000261798 MRS2Q9HD23 443 aa14.59□□□□□ -0.07
CSNK1A1-201ENST00000261798 BCL11AQ9H165 835 aa14.58□□□□□ -0.08
CSNK1A1-201ENST00000261798 TMC1Q8TDI8 760 aa14.55□□□□□ -0.08
CSNK1A1-201ENST00000261798 FBLN2P98095 1184 aa14.52□□□□□ -0.08
CSNK1A1-201ENST00000261798 HSP90AA1P07900 732 aaKnown RBP14.52□□□□□ -0.08
CSNK1A1-201ENST00000261798 CLIP1P30622 1438 aa14.5□□□□□ -0.09
CSNK1A1-201ENST00000261798 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.5□□□□□ -0.09
CSNK1A1-201ENST00000261798 CEP162Q5TB80 1403 aa14.49□□□□□ -0.09
CSNK1A1-201ENST00000261798 DDRGK1Q96HY6 314 aa14.49□□□□□ -0.09
CSNK1A1-201ENST00000261798 SALL2Q9Y467 1007 aaPredicted RBP14.49□□□□□ -0.09
CSNK1A1-201ENST00000261798 HIRIP3Q9BW71 556 aaPredicted RBP14.48□□□□□ -0.09
CSNK1A1-201ENST00000261798 NEFMP07197 916 aa14.48□□□□□ -0.09
CSNK1A1-201ENST00000261798 EIF4G2P78344 907 aaKnown RBP eCLIP14.45□□□□□ -0.1
CSNK1A1-201ENST00000261798 PPM1GO15355 546 aaPredicted RBP14.45□□□□□ -0.1
CSNK1A1-201ENST00000261798 PPP4R2Q9NY27 417 aa14.44□□□□□ -0.1
CSNK1A1-201ENST00000261798 EEA1Q15075 1411 aa14.44□□□□□ -0.1
CSNK1A1-201ENST00000261798 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
CSNK1A1-201ENST00000261798 NOP58Q9Y2X3 529 aaKnown RBP14.42□□□□□ -0.1
CSNK1A1-201ENST00000261798 ARXQ96QS3 562 aa14.42□□□□□ -0.1
CSNK1A1-201ENST00000261798 RBM19Q9Y4C8 960 aaKnown RBP14.4□□□□□ -0.1
CSNK1A1-201ENST00000261798 ERICH6BQ5W0A0 696 aa14.4□□□□□ -0.1
CSNK1A1-201ENST00000261798 ARID3CA6NKF2 412 aa14.39□□□□□ -0.11
CSNK1A1-201ENST00000261798 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
CSNK1A1-201ENST00000261798 TNIKQ9UKE5 1360 aa14.38□□□□□ -0.11
CSNK1A1-201ENST00000261798 ZNF777Q9ULD5 760 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms