RNA–Protein interactions for RNA: ENST00000636926.1

ARHGEF9-228, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5 BASIC

Gene ARHGEF9, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-228ENST00000636926 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
ARHGEF9-228ENST00000636926 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
ARHGEF9-228ENST00000636926 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
ARHGEF9-228ENST00000636926 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
ARHGEF9-228ENST00000636926 APLP2Q06481 763 aa17.14■□□□□ 0.33
ARHGEF9-228ENST00000636926 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF9-228ENST00000636926 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
ARHGEF9-228ENST00000636926 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
ARHGEF9-228ENST00000636926 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
ARHGEF9-228ENST00000636926 ZEB1P37275 1124 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF9-228ENST00000636926 UBTFP17480 764 aaKnown RBP16.46■□□□□ 0.22
ARHGEF9-228ENST00000636926 PCGF6Q9BYE7 350 aa16.45■□□□□ 0.22
ARHGEF9-228ENST00000636926 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF9-228ENST00000636926 ATP1B4Q9UN42 357 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF9-228ENST00000636926 RANGAP1P46060 587 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF9-228ENST00000636926 CCER1Q8TC90 406 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF9-228ENST00000636926 CENPBP07199 599 aaPredicted RBP16.28■□□□□ 0.2
ARHGEF9-228ENST00000636926 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF9-228ENST00000636926 NEFLP07196 543 aa15.97■□□□□ 0.15
ARHGEF9-228ENST00000636926 ABCC9O60706 1549 aa15.95■□□□□ 0.14
ARHGEF9-228ENST00000636926 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
ARHGEF9-228ENST00000636926 ERICH6Q7L0X2 663 aa15.94■□□□□ 0.14
ARHGEF9-228ENST00000636926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
ARHGEF9-228ENST00000636926 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
ARHGEF9-228ENST00000636926 MYT1LQ9UL68 1186 aa15.82■□□□□ 0.12
ARHGEF9-228ENST00000636926 PPARGC1BQ86YN6 1023 aaKnown RBP15.79■□□□□ 0.12
ARHGEF9-228ENST00000636926 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
ARHGEF9-228ENST00000636926 ITGAEP38570 1179 aa15.74■□□□□ 0.11
ARHGEF9-228ENST00000636926 LOC105371045A0A1W2PR82 267 aa15.71■□□□□ 0.11
ARHGEF9-228ENST00000636926 HRCP23327 699 aa15.67■□□□□ 0.1
ARHGEF9-228ENST00000636926 YTHDC1Q96MU7 727 aaKnown RBP15.65■□□□□ 0.1
ARHGEF9-228ENST00000636926 POLR3GLQ9BT43 218 aa15.55■□□□□ 0.08
ARHGEF9-228ENST00000636926 FAM50AQ14320 339 aaKnown RBP15.5■□□□□ 0.07
ARHGEF9-228ENST00000636926 MYT1Q01538 1121 aa15.49■□□□□ 0.07
ARHGEF9-228ENST00000636926 CCDC180Q9P1Z9 1646 aa15.48■□□□□ 0.07
ARHGEF9-228ENST00000636926 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.07
ARHGEF9-228ENST00000636926 DAXXQ9UER7 740 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF9-228ENST00000636926 TRIM52Q96A61 297 aa15.42■□□□□ 0.06
ARHGEF9-228ENST00000636926 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
ARHGEF9-228ENST00000636926 SCRIBQ14160 1630 aa15.38■□□□□ 0.05
ARHGEF9-228ENST00000636926 SLC4A1APQ9BWU0 796 aaKnown RBP15.34■□□□□ 0.05
ARHGEF9-228ENST00000636926 FBLN2P98095 1184 aa15.33■□□□□ 0.05
ARHGEF9-228ENST00000636926 DIEXFQ68CQ4 756 aaKnown RBP15.3■□□□□ 0.04
ARHGEF9-228ENST00000636926 CDK11AQ9UQ88 783 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF9-228ENST00000636926 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
ARHGEF9-228ENST00000636926 CNGB1Q14028 1251 aaPredicted RBP15.21■□□□□ 0.03
ARHGEF9-228ENST00000636926 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
ARHGEF9-228ENST00000636926 ANP32CO43423 234 aa15.19■□□□□ 0.02
ARHGEF9-228ENST00000636926 P3H3Q8IVL6 736 aa15.12■□□□□ 0.01
ARHGEF9-228ENST00000636926 CLSPNQ9HAW4 1339 aa15.12■□□□□ 0.01
ARHGEF9-228ENST00000636926 ZNF326Q5BKZ1 582 aaKnown RBP15.11■□□□□ 0.01
ARHGEF9-228ENST00000636926 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF9-228ENST00000636926 NACADO15069 1562 aa15.08■□□□□ 0
ARHGEF9-228ENST00000636926 NEFMP07197 916 aa15.05■□□□□ -0
ARHGEF9-228ENST00000636926 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
ARHGEF9-228ENST00000636926 ZNF777Q9ULD5 760 aaPredicted RBP15.03■□□□□ -0
ARHGEF9-228ENST00000636926 DCAF1Q9Y4B6 1507 aa15.02□□□□□ -0.01
ARHGEF9-228ENST00000636926 ZBTB47Q9UFB7 747 aaPredicted RBP15.02□□□□□ -0.01
ARHGEF9-228ENST00000636926 EEA1Q15075 1411 aa15□□□□□ -0.01
ARHGEF9-228ENST00000636926 ESF1Q9H501 851 aaKnown RBP15□□□□□ -0.01
ARHGEF9-228ENST00000636926 RTL5Q5HYW3 569 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF9-228ENST00000636926 ARID3CA6NKF2 412 aa14.98□□□□□ -0.01
ARHGEF9-228ENST00000636926 BCANQ96GW7 911 aa14.96□□□□□ -0.01
ARHGEF9-228ENST00000636926 ACIN1Q9UKV3 1341 aaKnown RBP14.95□□□□□ -0.02
ARHGEF9-228ENST00000636926 TONSLQ96HA7 1378 aa14.95□□□□□ -0.02
ARHGEF9-228ENST00000636926 CANXP27824 592 aaKnown RBP14.89□□□□□ -0.03
ARHGEF9-228ENST00000636926 CHMP7Q8WUX9 453 aaPredicted RBP14.87□□□□□ -0.03
ARHGEF9-228ENST00000636926 RSF1Q96T23 1441 aaPredicted RBP14.87□□□□□ -0.03
ARHGEF9-228ENST00000636926 MTUS2Q5JR59 1369 aa14.87□□□□□ -0.03
ARHGEF9-228ENST00000636926 TSPY4P0CV99 314 aa14.86□□□□□ -0.03
ARHGEF9-228ENST00000636926 TSPY10P0CW01 314 aa14.86□□□□□ -0.03
ARHGEF9-228ENST00000636926 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
ARHGEF9-228ENST00000636926 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
ARHGEF9-228ENST00000636926 CLIP1P30622 1438 aa14.85□□□□□ -0.03
ARHGEF9-228ENST00000636926 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
ARHGEF9-228ENST00000636926 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
ARHGEF9-228ENST00000636926 CHGAP10645 457 aaKnown RBP14.78□□□□□ -0.04
ARHGEF9-228ENST00000636926 BAZ1AQ9NRL2 1556 aaPredicted RBP14.78□□□□□ -0.04
ARHGEF9-228ENST00000636926 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.04
ARHGEF9-228ENST00000636926 KIF27Q86VH2 1401 aa14.77□□□□□ -0.05
ARHGEF9-228ENST00000636926 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
ARHGEF9-228ENST00000636926 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
ARHGEF9-228ENST00000636926 PLEKHD1A6NEE1 506 aa14.71□□□□□ -0.05
ARHGEF9-228ENST00000636926 CHIC2Q9UKJ5 165 aa14.7□□□□□ -0.06
ARHGEF9-228ENST00000636926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.68□□□□□ -0.06
ARHGEF9-228ENST00000636926 TNIKQ9UKE5 1360 aa14.67□□□□□ -0.06
ARHGEF9-228ENST00000636926 CEP162Q5TB80 1403 aa14.67□□□□□ -0.06
ARHGEF9-228ENST00000636926 ANP32AP39687 249 aaKnown RBP14.65□□□□□ -0.06
ARHGEF9-228ENST00000636926 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF9-228ENST00000636926 TMC1Q8TDI8 760 aa14.62□□□□□ -0.07
ARHGEF9-228ENST00000636926 DDX10Q13206 875 aaKnown RBP14.61□□□□□ -0.07
ARHGEF9-228ENST00000636926 HNRNPUQ00839 825 aaKnown RBP eCLIP14.6□□□□□ -0.07
ARHGEF9-228ENST00000636926 WDR43Q15061 677 aaKnown RBP eCLIP14.59□□□□□ -0.07
ARHGEF9-228ENST00000636926 EIF4G2P78344 907 aaKnown RBP eCLIP14.59□□□□□ -0.07
ARHGEF9-228ENST00000636926 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
ARHGEF9-228ENST00000636926 UPF2Q9HAU5 1272 aaKnown RBP14.56□□□□□ -0.08
ARHGEF9-228ENST00000636926 FHAD1B1AJZ9 1412 aa14.56□□□□□ -0.08
ARHGEF9-228ENST00000636926 CFDP1Q9UEE9 299 aaPredicted RBP14.55□□□□□ -0.08
ARHGEF9-228ENST00000636926 FAM9BQ8IZU0 186 aa14.54□□□□□ -0.08
ARHGEF9-228ENST00000636926 CDCA8Q53HL2 280 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms