RNA–Protein interactions for RNA: ENST00000441366.6

EPB42-202, Transcript of erythrocyte membrane protein band 4.2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPB42, Length 2,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-202ENST00000441366 NISCHQ9Y2I1 1504 aa29.27■■■□□ 2.28
EPB42-202ENST00000441366 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
EPB42-202ENST00000441366 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
EPB42-202ENST00000441366 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
EPB42-202ENST00000441366 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.5
EPB42-202ENST00000441366 ABCC9O60706 1549 aa24.01■■□□□ 1.43
EPB42-202ENST00000441366 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
EPB42-202ENST00000441366 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
EPB42-202ENST00000441366 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.37
EPB42-202ENST00000441366 SCRIBQ14160 1630 aa23.54■■□□□ 1.36
EPB42-202ENST00000441366 NACADO15069 1562 aa23.5■■□□□ 1.35
EPB42-202ENST00000441366 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
EPB42-202ENST00000441366 UNC13AQ9UPW8 1703 aa22.93■■□□□ 1.26
EPB42-202ENST00000441366 CECR2Q9BXF3 1484 aa22.89■■□□□ 1.25
EPB42-202ENST00000441366 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
EPB42-202ENST00000441366 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
EPB42-202ENST00000441366 MROH2BQ7Z745 1585 aa22.73■■□□□ 1.23
EPB42-202ENST00000441366 BICRAQ9NZM4 1560 aa22.66■■□□□ 1.22
EPB42-202ENST00000441366 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
EPB42-202ENST00000441366 WIZO95785 1651 aa22.59■■□□□ 1.21
EPB42-202ENST00000441366 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
EPB42-202ENST00000441366 SMARCA4P51532 1647 aa22.45■■□□□ 1.18
EPB42-202ENST00000441366 TOP2AP11388 1531 aaKnown RBP22.2■■□□□ 1.14
EPB42-202ENST00000441366 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
EPB42-202ENST00000441366 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
EPB42-202ENST00000441366 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
EPB42-202ENST00000441366 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
EPB42-202ENST00000441366 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
EPB42-202ENST00000441366 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
EPB42-202ENST00000441366 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.11
EPB42-202ENST00000441366 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
EPB42-202ENST00000441366 FAM9AQ8IZU1 332 aaPredicted RBP21.88■■□□□ 1.09
EPB42-202ENST00000441366 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
EPB42-202ENST00000441366 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
EPB42-202ENST00000441366 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
EPB42-202ENST00000441366 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
EPB42-202ENST00000441366 CC2D2AQ9P2K1 1620 aa21.61■■□□□ 1.05
EPB42-202ENST00000441366 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
EPB42-202ENST00000441366 SOGA1O94964 1423 aa21.46■■□□□ 1.03
EPB42-202ENST00000441366 SYNJ1O43426 1573 aa21.45■■□□□ 1.02
EPB42-202ENST00000441366 RUSC2Q8N2Y8 1516 aa21.4■■□□□ 1.02
EPB42-202ENST00000441366 CFTRP13569 1480 aa21.36■■□□□ 1.01
EPB42-202ENST00000441366 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
EPB42-202ENST00000441366 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
EPB42-202ENST00000441366 CSRNP3Q8WYN3 585 aa21.28■■□□□ 1
EPB42-202ENST00000441366 HRCP23327 699 aa21.26■□□□□ 0.99
EPB42-202ENST00000441366 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
EPB42-202ENST00000441366 CUX1P39880 1505 aa21.2■□□□□ 0.98
EPB42-202ENST00000441366 EEA1Q15075 1411 aa21.2■□□□□ 0.98
EPB42-202ENST00000441366 PCGF6Q9BYE7 350 aa21.19■□□□□ 0.98
EPB42-202ENST00000441366 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
EPB42-202ENST00000441366 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
EPB42-202ENST00000441366 NESP48681 1621 aa21.17■□□□□ 0.98
EPB42-202ENST00000441366 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
EPB42-202ENST00000441366 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.96
EPB42-202ENST00000441366 GOLGA3Q08378 1498 aa21.03■□□□□ 0.96
EPB42-202ENST00000441366 PPARGC1BQ86YN6 1023 aaKnown RBP21.02■□□□□ 0.96
EPB42-202ENST00000441366 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
EPB42-202ENST00000441366 CEP162Q5TB80 1403 aa21■□□□□ 0.95
EPB42-202ENST00000441366 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
EPB42-202ENST00000441366 RAPGEF2Q9Y4G8 1499 aa20.97■□□□□ 0.95
EPB42-202ENST00000441366 KIF21BO75037 1637 aa20.95■□□□□ 0.94
EPB42-202ENST00000441366 RANGAP1P46060 587 aaPredicted RBP20.95■□□□□ 0.94
EPB42-202ENST00000441366 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
EPB42-202ENST00000441366 LAMC3Q9Y6N6 1575 aa20.94■□□□□ 0.94
EPB42-202ENST00000441366 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
EPB42-202ENST00000441366 KIF27Q86VH2 1401 aa20.93■□□□□ 0.94
EPB42-202ENST00000441366 CUX2O14529 1486 aa20.89■□□□□ 0.93
EPB42-202ENST00000441366 TOPBP1Q92547 1522 aa20.86■□□□□ 0.93
EPB42-202ENST00000441366 DNMBPQ6XZF7 1577 aa20.84■□□□□ 0.93
EPB42-202ENST00000441366 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.93
EPB42-202ENST00000441366 RAD54L2Q9Y4B4 1467 aa20.83■□□□□ 0.93
EPB42-202ENST00000441366 TTBK1Q5TCY1 1321 aaPredicted RBP20.83■□□□□ 0.92
EPB42-202ENST00000441366 PRXQ9BXM0 1461 aa20.82■□□□□ 0.92
EPB42-202ENST00000441366 KIF21AQ7Z4S6 1674 aa20.81■□□□□ 0.92
EPB42-202ENST00000441366 URB2Q14146 1524 aaKnown RBP20.8■□□□□ 0.92
EPB42-202ENST00000441366 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
EPB42-202ENST00000441366 CLIP1P30622 1438 aa20.77■□□□□ 0.92
EPB42-202ENST00000441366 IGF1RP08069 1367 aa20.77■□□□□ 0.92
EPB42-202ENST00000441366 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
EPB42-202ENST00000441366 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
EPB42-202ENST00000441366 ABCA10Q8WWZ4 1543 aa20.67■□□□□ 0.9
EPB42-202ENST00000441366 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
EPB42-202ENST00000441366 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
EPB42-202ENST00000441366 WDR97A6NE52 1622 aa20.55■□□□□ 0.88
EPB42-202ENST00000441366 MRC2Q9UBG0 1479 aa20.55■□□□□ 0.88
EPB42-202ENST00000441366 ARAP1Q96P48 1450 aa20.52■□□□□ 0.87
EPB42-202ENST00000441366 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
EPB42-202ENST00000441366 APLP2Q06481 763 aa20.5■□□□□ 0.87
EPB42-202ENST00000441366 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
EPB42-202ENST00000441366 TARBP1Q13395 1621 aaKnown RBP20.48■□□□□ 0.87
EPB42-202ENST00000441366 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
EPB42-202ENST00000441366 ARHGAP35Q9NRY4 1499 aa20.47■□□□□ 0.87
EPB42-202ENST00000441366 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
EPB42-202ENST00000441366 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.86
EPB42-202ENST00000441366 CUL7Q14999 1698 aa20.44■□□□□ 0.86
EPB42-202ENST00000441366 WDR62O43379 1518 aa20.39■□□□□ 0.85
EPB42-202ENST00000441366 PELP1Q8IZL8 1130 aaKnown RBP20.38■□□□□ 0.85
EPB42-202ENST00000441366 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
EPB42-202ENST00000441366 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms