RNA–Protein interactions for RNA: ENST00000594199.2

SLC25A53-202, Transcript of solute carrier family 25 member 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC25A53, Length 6,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A53-202ENST00000594199 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
SLC25A53-202ENST00000594199 DCAF8L2P0C7V8 631 aa18.52■□□□□ 0.56
SLC25A53-202ENST00000594199 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
SLC25A53-202ENST00000594199 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
SLC25A53-202ENST00000594199 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
SLC25A53-202ENST00000594199 CCDC180Q9P1Z9 1646 aa17.01■□□□□ 0.31
SLC25A53-202ENST00000594199 ABCC9O60706 1549 aa16.91■□□□□ 0.3
SLC25A53-202ENST00000594199 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.25
SLC25A53-202ENST00000594199 TTBK1Q5TCY1 1321 aaPredicted RBP16.57■□□□□ 0.24
SLC25A53-202ENST00000594199 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
SLC25A53-202ENST00000594199 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
SLC25A53-202ENST00000594199 RB1CC1Q8TDY2 1594 aa16.36■□□□□ 0.21
SLC25A53-202ENST00000594199 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
SLC25A53-202ENST00000594199 NACADO15069 1562 aa16.33■□□□□ 0.21
SLC25A53-202ENST00000594199 APLP2Q06481 763 aa16.3■□□□□ 0.2
SLC25A53-202ENST00000594199 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
SLC25A53-202ENST00000594199 PCGF6Q9BYE7 350 aa16.29■□□□□ 0.2
SLC25A53-202ENST00000594199 DCAF1Q9Y4B6 1507 aa16.28■□□□□ 0.2
SLC25A53-202ENST00000594199 RANGAP1P46060 587 aaPredicted RBP16.26■□□□□ 0.19
SLC25A53-202ENST00000594199 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
SLC25A53-202ENST00000594199 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
SLC25A53-202ENST00000594199 ERICH6Q7L0X2 663 aa15.99■□□□□ 0.15
SLC25A53-202ENST00000594199 ATP1B4Q9UN42 357 aaPredicted RBP15.98■□□□□ 0.15
SLC25A53-202ENST00000594199 UBTFP17480 764 aaKnown RBP15.96■□□□□ 0.14
SLC25A53-202ENST00000594199 CCER1Q8TC90 406 aaPredicted RBP15.94■□□□□ 0.14
SLC25A53-202ENST00000594199 YTHDC1Q96MU7 727 aaKnown RBP15.93■□□□□ 0.14
SLC25A53-202ENST00000594199 PPARGC1BQ86YN6 1023 aaKnown RBP15.87■□□□□ 0.13
SLC25A53-202ENST00000594199 CENPBP07199 599 aaPredicted RBP15.85■□□□□ 0.13
SLC25A53-202ENST00000594199 CHIC1Q5VXU3 224 aa15.83■□□□□ 0.13
SLC25A53-202ENST00000594199 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
SLC25A53-202ENST00000594199 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
SLC25A53-202ENST00000594199 RSF1Q96T23 1441 aaPredicted RBP15.61■□□□□ 0.09
SLC25A53-202ENST00000594199 BAZ1BQ9UIG0 1483 aaKnown RBP15.58■□□□□ 0.08
SLC25A53-202ENST00000594199 NEFLP07196 543 aa15.57■□□□□ 0.08
SLC25A53-202ENST00000594199 MYT1Q01538 1121 aa15.49■□□□□ 0.07
SLC25A53-202ENST00000594199 CNGB1Q14028 1251 aaPredicted RBP15.47■□□□□ 0.07
SLC25A53-202ENST00000594199 ITGAEP38570 1179 aa15.47■□□□□ 0.07
SLC25A53-202ENST00000594199 SMARCA2P51531 1590 aa15.46■□□□□ 0.07
SLC25A53-202ENST00000594199 POLR3GLQ9BT43 218 aa15.45■□□□□ 0.06
SLC25A53-202ENST00000594199 CSRNP3Q8WYN3 585 aa15.43■□□□□ 0.06
SLC25A53-202ENST00000594199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
SLC25A53-202ENST00000594199 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
SLC25A53-202ENST00000594199 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
SLC25A53-202ENST00000594199 LOC105371045A0A1W2PR82 267 aa15.35■□□□□ 0.05
SLC25A53-202ENST00000594199 EEA1Q15075 1411 aa15.35■□□□□ 0.05
SLC25A53-202ENST00000594199 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
SLC25A53-202ENST00000594199 HRCP23327 699 aa15.29■□□□□ 0.04
SLC25A53-202ENST00000594199 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
SLC25A53-202ENST00000594199 FBLN2P98095 1184 aa15.28■□□□□ 0.04
SLC25A53-202ENST00000594199 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
SLC25A53-202ENST00000594199 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
SLC25A53-202ENST00000594199 DAXXQ9UER7 740 aaPredicted RBP15.21■□□□□ 0.03
SLC25A53-202ENST00000594199 TOP2AP11388 1531 aaKnown RBP15.2■□□□□ 0.02
SLC25A53-202ENST00000594199 CDK11AQ9UQ88 783 aaPredicted RBP15.19■□□□□ 0.02
SLC25A53-202ENST00000594199 PDS5BQ9NTI5 1447 aa15.19■□□□□ 0.02
SLC25A53-202ENST00000594199 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
SLC25A53-202ENST00000594199 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
SLC25A53-202ENST00000594199 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
SLC25A53-202ENST00000594199 KIF27Q86VH2 1401 aa15.14■□□□□ 0.01
SLC25A53-202ENST00000594199 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
SLC25A53-202ENST00000594199 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
SLC25A53-202ENST00000594199 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0.01
SLC25A53-202ENST00000594199 CADPSQ9ULU8 1353 aa15.07■□□□□ 0
SLC25A53-202ENST00000594199 NCAPD3P42695 1498 aa15.04■□□□□ -0
SLC25A53-202ENST00000594199 GOLGA3Q08378 1498 aa15.03■□□□□ -0
SLC25A53-202ENST00000594199 NPM1P06748 294 aaKnown RBP eCLIP15.02□□□□□ -0.01
SLC25A53-202ENST00000594199 BCANQ96GW7 911 aa14.99□□□□□ -0.01
SLC25A53-202ENST00000594199 CEP164Q9UPV0 1460 aa14.99□□□□□ -0.01
SLC25A53-202ENST00000594199 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
SLC25A53-202ENST00000594199 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
SLC25A53-202ENST00000594199 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
SLC25A53-202ENST00000594199 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.02
SLC25A53-202ENST00000594199 WIZO95785 1651 aa14.96□□□□□ -0.02
SLC25A53-202ENST00000594199 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
SLC25A53-202ENST00000594199 NEUROD1Q13562 356 aa14.92□□□□□ -0.02
SLC25A53-202ENST00000594199 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
SLC25A53-202ENST00000594199 CLIP1P30622 1438 aa14.92□□□□□ -0.02
SLC25A53-202ENST00000594199 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
SLC25A53-202ENST00000594199 TNIKQ9UKE5 1360 aa14.89□□□□□ -0.03
SLC25A53-202ENST00000594199 CUX2O14529 1486 aa14.88□□□□□ -0.03
SLC25A53-202ENST00000594199 ACIN1Q9UKV3 1341 aaKnown RBP14.86□□□□□ -0.03
SLC25A53-202ENST00000594199 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
SLC25A53-202ENST00000594199 TRIM52Q96A61 297 aa14.84□□□□□ -0.03
SLC25A53-202ENST00000594199 RTL5Q5HYW3 569 aaPredicted RBP14.84□□□□□ -0.03
SLC25A53-202ENST00000594199 SOGA1O94964 1423 aa14.83□□□□□ -0.03
SLC25A53-202ENST00000594199 CARMIL1Q5VZK9 1371 aa14.83□□□□□ -0.03
SLC25A53-202ENST00000594199 BCL11AQ9H165 835 aa14.81□□□□□ -0.04
SLC25A53-202ENST00000594199 GTF3C3Q9Y5Q9 886 aa14.8□□□□□ -0.04
SLC25A53-202ENST00000594199 FANCD2Q9BXW9 1451 aa14.8□□□□□ -0.04
SLC25A53-202ENST00000594199 ZNF326Q5BKZ1 582 aaKnown RBP14.79□□□□□ -0.04
SLC25A53-202ENST00000594199 MTUS2Q5JR59 1369 aa14.79□□□□□ -0.04
SLC25A53-202ENST00000594199 CEP162Q5TB80 1403 aa14.77□□□□□ -0.05
SLC25A53-202ENST00000594199 FHAD1B1AJZ9 1412 aa14.76□□□□□ -0.05
SLC25A53-202ENST00000594199 BICRAQ9NZM4 1560 aa14.75□□□□□ -0.05
SLC25A53-202ENST00000594199 PLEKHD1A6NEE1 506 aa14.74□□□□□ -0.05
SLC25A53-202ENST00000594199 CARMIL2Q6F5E8 1435 aa14.71□□□□□ -0.05
SLC25A53-202ENST00000594199 ZNF777Q9ULD5 760 aaPredicted RBP14.71□□□□□ -0.05
SLC25A53-202ENST00000594199 ARID3CA6NKF2 412 aa14.7□□□□□ -0.06
SLC25A53-202ENST00000594199 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
SLC25A53-202ENST00000594199 CFTRP13569 1480 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms