RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
PBRM1-205ENST00000409057 NISCHQ9Y2I1 1504 aa17.9■□□□□ 0.46
PBRM1-205ENST00000409057 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
PBRM1-205ENST00000409057 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
PBRM1-205ENST00000409057 PELP1Q8IZL8 1130 aaKnown RBP16.98■□□□□ 0.31
PBRM1-205ENST00000409057 EHMT2Q96KQ7 1210 aa16.91■□□□□ 0.3
PBRM1-205ENST00000409057 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
PBRM1-205ENST00000409057 FAM9AQ8IZU1 332 aaPredicted RBP16.59■□□□□ 0.25
PBRM1-205ENST00000409057 APLP2Q06481 763 aa16.58■□□□□ 0.24
PBRM1-205ENST00000409057 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
PBRM1-205ENST00000409057 CENPBP07199 599 aaPredicted RBP16.5■□□□□ 0.23
PBRM1-205ENST00000409057 TTBK1Q5TCY1 1321 aaPredicted RBP16.37■□□□□ 0.21
PBRM1-205ENST00000409057 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
PBRM1-205ENST00000409057 MYT1Q01538 1121 aa16.28■□□□□ 0.2
PBRM1-205ENST00000409057 CCER1Q8TC90 406 aaPredicted RBP16.28■□□□□ 0.2
PBRM1-205ENST00000409057 ERICH6Q7L0X2 663 aa16.21■□□□□ 0.19
PBRM1-205ENST00000409057 RANGAP1P46060 587 aaPredicted RBP16.14■□□□□ 0.17
PBRM1-205ENST00000409057 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
PBRM1-205ENST00000409057 HRCP23327 699 aa16.05■□□□□ 0.16
PBRM1-205ENST00000409057 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
PBRM1-205ENST00000409057 NEFLP07196 543 aa15.99■□□□□ 0.15
PBRM1-205ENST00000409057 YTHDC1Q96MU7 727 aaKnown RBP15.98■□□□□ 0.15
PBRM1-205ENST00000409057 ATP1B4Q9UN42 357 aaPredicted RBP15.94■□□□□ 0.14
PBRM1-205ENST00000409057 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
PBRM1-205ENST00000409057 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
PBRM1-205ENST00000409057 LOC105371045A0A1W2PR82 267 aa15.75■□□□□ 0.11
PBRM1-205ENST00000409057 ITGAEP38570 1179 aa15.54■□□□□ 0.08
PBRM1-205ENST00000409057 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.07
PBRM1-205ENST00000409057 DIEXFQ68CQ4 756 aaKnown RBP15.5■□□□□ 0.07
PBRM1-205ENST00000409057 DAXXQ9UER7 740 aaPredicted RBP15.45■□□□□ 0.06
PBRM1-205ENST00000409057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
PBRM1-205ENST00000409057 POLR3GLQ9BT43 218 aa15.31■□□□□ 0.04
PBRM1-205ENST00000409057 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
PBRM1-205ENST00000409057 RTL5Q5HYW3 569 aaPredicted RBP15.26■□□□□ 0.03
PBRM1-205ENST00000409057 ABCC9O60706 1549 aa15.22■□□□□ 0.03
PBRM1-205ENST00000409057 MYT1LQ9UL68 1186 aa15.2■□□□□ 0.02
PBRM1-205ENST00000409057 CNGB1Q14028 1251 aaPredicted RBP15.18■□□□□ 0.02
PBRM1-205ENST00000409057 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
PBRM1-205ENST00000409057 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
PBRM1-205ENST00000409057 ACIN1Q9UKV3 1341 aaKnown RBP15.13■□□□□ 0.01
PBRM1-205ENST00000409057 ZNF316A6NFI3 1004 aaPredicted RBP15.11■□□□□ 0.01
PBRM1-205ENST00000409057 BCANQ96GW7 911 aa15.08■□□□□ 0.01
PBRM1-205ENST00000409057 CLSPNQ9HAW4 1339 aa15.05■□□□□ 0
PBRM1-205ENST00000409057 CDK11AQ9UQ88 783 aaPredicted RBP15.04■□□□□ -0
PBRM1-205ENST00000409057 ANP32CO43423 234 aa15.03■□□□□ -0
PBRM1-205ENST00000409057 NEUROD1Q13562 356 aa15.03■□□□□ -0
PBRM1-205ENST00000409057 TRIM52Q96A61 297 aa15.02■□□□□ -0
PBRM1-205ENST00000409057 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
PBRM1-205ENST00000409057 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
PBRM1-205ENST00000409057 ZCCHC6Q5VYS8 1495 aaKnown RBP14.84□□□□□ -0.03
PBRM1-205ENST00000409057 ZNF326Q5BKZ1 582 aaKnown RBP14.84□□□□□ -0.03
PBRM1-205ENST00000409057 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
PBRM1-205ENST00000409057 P3H3Q8IVL6 736 aa14.81□□□□□ -0.04
PBRM1-205ENST00000409057 ANP32AP39687 249 aaKnown RBP14.79□□□□□ -0.04
PBRM1-205ENST00000409057 FBLN2P98095 1184 aa14.75□□□□□ -0.05
PBRM1-205ENST00000409057 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
PBRM1-205ENST00000409057 FKBP8Q14318 412 aa14.73□□□□□ -0.05
PBRM1-205ENST00000409057 ARID3CA6NKF2 412 aa14.69□□□□□ -0.06
PBRM1-205ENST00000409057 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
PBRM1-205ENST00000409057 ZBTB47Q9UFB7 747 aaPredicted RBP14.66□□□□□ -0.06
PBRM1-205ENST00000409057 CANXP27824 592 aaKnown RBP14.64□□□□□ -0.07
PBRM1-205ENST00000409057 NPM2Q86SE8 214 aaKnown RBP14.62□□□□□ -0.07
PBRM1-205ENST00000409057 HNRNPUQ00839 825 aaKnown RBP eCLIP14.6□□□□□ -0.07
PBRM1-205ENST00000409057 ZNF777Q9ULD5 760 aaPredicted RBP14.6□□□□□ -0.07
PBRM1-205ENST00000409057 TONSLQ96HA7 1378 aa14.59□□□□□ -0.07
PBRM1-205ENST00000409057 DDX10Q13206 875 aaKnown RBP14.59□□□□□ -0.07
PBRM1-205ENST00000409057 EIF5BO60841 1220 aaKnown RBP14.54□□□□□ -0.08
PBRM1-205ENST00000409057 MIER1Q8N108 512 aa14.53□□□□□ -0.08
PBRM1-205ENST00000409057 CCDC180Q9P1Z9 1646 aa14.52□□□□□ -0.08
PBRM1-205ENST00000409057 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
PBRM1-205ENST00000409057 NEFMP07197 916 aa14.49□□□□□ -0.09
PBRM1-205ENST00000409057 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
PBRM1-205ENST00000409057 CCDC136Q96JN2 1154 aa14.47□□□□□ -0.09
PBRM1-205ENST00000409057 CLIP1P30622 1438 aa14.46□□□□□ -0.1
PBRM1-205ENST00000409057 ANP32BQ92688 251 aaKnown RBP14.45□□□□□ -0.1
PBRM1-205ENST00000409057 BCL11AQ9H165 835 aa14.44□□□□□ -0.1
PBRM1-205ENST00000409057 UPF2Q9HAU5 1272 aaKnown RBP14.44□□□□□ -0.1
PBRM1-205ENST00000409057 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
PBRM1-205ENST00000409057 CHIC2Q9UKJ5 165 aa14.43□□□□□ -0.1
PBRM1-205ENST00000409057 NBR1Q14596 966 aa14.42□□□□□ -0.1
PBRM1-205ENST00000409057 GLIPR1L2Q4G1C9 344 aa14.4□□□□□ -0.1
PBRM1-205ENST00000409057 TMC1Q8TDI8 760 aa14.39□□□□□ -0.11
PBRM1-205ENST00000409057 HSP90AA1P07900 732 aaKnown RBP14.39□□□□□ -0.11
PBRM1-205ENST00000409057 EEA1Q15075 1411 aa14.38□□□□□ -0.11
PBRM1-205ENST00000409057 MTUS2Q5JR59 1369 aa14.38□□□□□ -0.11
PBRM1-205ENST00000409057 MRS2Q9HD23 443 aa14.38□□□□□ -0.11
PBRM1-205ENST00000409057 CEP162Q5TB80 1403 aa14.36□□□□□ -0.11
PBRM1-205ENST00000409057 SLC24A1O60721 1099 aa14.35□□□□□ -0.11
PBRM1-205ENST00000409057 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.34□□□□□ -0.11
PBRM1-205ENST00000409057 SALL2Q9Y467 1007 aaPredicted RBP14.34□□□□□ -0.11
PBRM1-205ENST00000409057 ANP32EQ9BTT0 268 aa14.33□□□□□ -0.11
PBRM1-205ENST00000409057 GOLGA3Q08378 1498 aa14.33□□□□□ -0.11
PBRM1-205ENST00000409057 CHGAP10645 457 aaKnown RBP14.33□□□□□ -0.12
PBRM1-205ENST00000409057 IRX6P78412 446 aaPredicted RBP14.32□□□□□ -0.12
PBRM1-205ENST00000409057 TSPY4P0CV99 314 aa14.31□□□□□ -0.12
PBRM1-205ENST00000409057 TSPY10P0CW01 314 aa14.31□□□□□ -0.12
PBRM1-205ENST00000409057 HIRIP3Q9BW71 556 aaPredicted RBP14.31□□□□□ -0.12
PBRM1-205ENST00000409057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.121e-6■■■□□ 19.2
PBRM1-205ENST00000409057 WRNQ14191 1432 aaPredicted RBP eCLIP14.28□□□□□ -0.12
PBRM1-205ENST00000409057 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms