RNA–Protein interactions for RNA: ENST00000409229.7

SLC3A1-202, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,909 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-202ENST00000409229 PELP1Q8IZL8 1130 aaKnown RBP20.13■□□□□ 0.81
SLC3A1-202ENST00000409229 HRCP23327 699 aa19.89■□□□□ 0.78
SLC3A1-202ENST00000409229 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
SLC3A1-202ENST00000409229 PPARGC1BQ86YN6 1023 aaKnown RBP19.61■□□□□ 0.73
SLC3A1-202ENST00000409229 MYT1Q01538 1121 aa19.51■□□□□ 0.71
SLC3A1-202ENST00000409229 PCGF6Q9BYE7 350 aa19.3■□□□□ 0.68
SLC3A1-202ENST00000409229 SCAF1Q9H7N4 1312 aaKnown RBP19.24■□□□□ 0.67
SLC3A1-202ENST00000409229 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
SLC3A1-202ENST00000409229 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
SLC3A1-202ENST00000409229 TTBK1Q5TCY1 1321 aaPredicted RBP18.54■□□□□ 0.56
SLC3A1-202ENST00000409229 ACIN1Q9UKV3 1341 aaKnown RBP18.54■□□□□ 0.56
SLC3A1-202ENST00000409229 NEUROD1Q13562 356 aa18.5■□□□□ 0.55
SLC3A1-202ENST00000409229 GTF3C3Q9Y5Q9 886 aa18.5■□□□□ 0.55
SLC3A1-202ENST00000409229 ZEB1P37275 1124 aaPredicted RBP18.39■□□□□ 0.54
SLC3A1-202ENST00000409229 SHROOM4Q9ULL8 1493 aa18.37■□□□□ 0.53
SLC3A1-202ENST00000409229 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
SLC3A1-202ENST00000409229 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
SLC3A1-202ENST00000409229 BCL11AQ9H165 835 aa18.32■□□□□ 0.52
SLC3A1-202ENST00000409229 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
SLC3A1-202ENST00000409229 CENPBP07199 599 aaPredicted RBP18.23■□□□□ 0.51
SLC3A1-202ENST00000409229 PRKCSHP14314 528 aaPredicted RBP18.21■□□□□ 0.51
SLC3A1-202ENST00000409229 FAM9AQ8IZU1 332 aaPredicted RBP18.17■□□□□ 0.5
SLC3A1-202ENST00000409229 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
SLC3A1-202ENST00000409229 CCDC180Q9P1Z9 1646 aa18.1■□□□□ 0.49
SLC3A1-202ENST00000409229 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
SLC3A1-202ENST00000409229 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
SLC3A1-202ENST00000409229 ANP32EQ9BTT0 268 aa17.85■□□□□ 0.45
SLC3A1-202ENST00000409229 ERICH6Q7L0X2 663 aa17.8■□□□□ 0.44
SLC3A1-202ENST00000409229 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
SLC3A1-202ENST00000409229 APLP2Q06481 763 aa17.68■□□□□ 0.42
SLC3A1-202ENST00000409229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
SLC3A1-202ENST00000409229 CCER1Q8TC90 406 aaPredicted RBP17.63■□□□□ 0.41
SLC3A1-202ENST00000409229 TSHZ2Q9NRE2 1034 aa17.49■□□□□ 0.39
SLC3A1-202ENST00000409229 SLC24A1O60721 1099 aa17.49■□□□□ 0.39
SLC3A1-202ENST00000409229 TRIM41Q8WV44 630 aa17.44■□□□□ 0.38
SLC3A1-202ENST00000409229 MIER1Q8N108 512 aa17.4■□□□□ 0.38
SLC3A1-202ENST00000409229 SUPT16HQ9Y5B9 1047 aaKnown RBP17.38■□□□□ 0.37
SLC3A1-202ENST00000409229 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
SLC3A1-202ENST00000409229 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
SLC3A1-202ENST00000409229 ANO8Q9HCE9 1232 aaPredicted RBP17.17■□□□□ 0.34
SLC3A1-202ENST00000409229 CLSPNQ9HAW4 1339 aa17.15■□□□□ 0.34
SLC3A1-202ENST00000409229 BCANQ96GW7 911 aa17.09■□□□□ 0.33
SLC3A1-202ENST00000409229 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
SLC3A1-202ENST00000409229 MSH5O43196 834 aa16.94■□□□□ 0.3
SLC3A1-202ENST00000409229 SALL2Q9Y467 1007 aaPredicted RBP16.9■□□□□ 0.3
SLC3A1-202ENST00000409229 CCDC136Q96JN2 1154 aa16.9■□□□□ 0.3
SLC3A1-202ENST00000409229 DEKP35659 375 aaKnown RBP16.87■□□□□ 0.29
SLC3A1-202ENST00000409229 FKBP8Q14318 412 aa16.86■□□□□ 0.29
SLC3A1-202ENST00000409229 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
SLC3A1-202ENST00000409229 DAXXQ9UER7 740 aaPredicted RBP16.82■□□□□ 0.28
SLC3A1-202ENST00000409229 ITGAEP38570 1179 aa16.8■□□□□ 0.28
SLC3A1-202ENST00000409229 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
SLC3A1-202ENST00000409229 EIF5BO60841 1220 aaKnown RBP16.75■□□□□ 0.27
SLC3A1-202ENST00000409229 UBE2Q2Q8WVN8 375 aa16.73■□□□□ 0.27
SLC3A1-202ENST00000409229 MYT1LQ9UL68 1186 aa16.72■□□□□ 0.27
SLC3A1-202ENST00000409229 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.69■□□□□ 0.26
SLC3A1-202ENST00000409229 NEFLP07196 543 aa16.67■□□□□ 0.26
SLC3A1-202ENST00000409229 FANCIQ9NVI1 1328 aa16.63■□□□□ 0.25
SLC3A1-202ENST00000409229 KCNH8Q96L42 1107 aa16.63■□□□□ 0.25
SLC3A1-202ENST00000409229 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
SLC3A1-202ENST00000409229 ERICH6BQ5W0A0 696 aa16.62■□□□□ 0.25
SLC3A1-202ENST00000409229 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
SLC3A1-202ENST00000409229 NBR1Q14596 966 aa16.59■□□□□ 0.25
SLC3A1-202ENST00000409229 IL27Q8NEV9 243 aa16.55■□□□□ 0.24
SLC3A1-202ENST00000409229 CDK11AQ9UQ88 783 aaPredicted RBP16.5■□□□□ 0.23
SLC3A1-202ENST00000409229 PLEKHG5O94827 1062 aa16.43■□□□□ 0.22
SLC3A1-202ENST00000409229 PKNOX2Q96KN3 472 aa16.4■□□□□ 0.22
SLC3A1-202ENST00000409229 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
SLC3A1-202ENST00000409229 RTL5Q5HYW3 569 aaPredicted RBP16.36■□□□□ 0.21
SLC3A1-202ENST00000409229 NOP58Q9Y2X3 529 aaKnown RBP16.35■□□□□ 0.21
SLC3A1-202ENST00000409229 IRX6P78412 446 aaPredicted RBP16.35■□□□□ 0.21
SLC3A1-202ENST00000409229 WRNQ14191 1432 aaPredicted RBP eCLIP16.35■□□□□ 0.21
SLC3A1-202ENST00000409229 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
SLC3A1-202ENST00000409229 CEP162Q5TB80 1403 aa16.26■□□□□ 0.19
SLC3A1-202ENST00000409229 DDX10Q13206 875 aaKnown RBP16.21■□□□□ 0.19
SLC3A1-202ENST00000409229 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.19
SLC3A1-202ENST00000409229 PODXL2Q9NZ53 605 aa16.2■□□□□ 0.18
SLC3A1-202ENST00000409229 RSF1Q96T23 1441 aaPredicted RBP16.17■□□□□ 0.18
SLC3A1-202ENST00000409229 TIMELESSQ9UNS1 1208 aa16.15■□□□□ 0.18
SLC3A1-202ENST00000409229 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
SLC3A1-202ENST00000409229 DHX57Q6P158 1386 aaKnown RBP16.1■□□□□ 0.17
SLC3A1-202ENST00000409229 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
SLC3A1-202ENST00000409229 B4GALNT3Q6L9W6 998 aa16.08■□□□□ 0.17
SLC3A1-202ENST00000409229 BRPF3Q9ULD4 1205 aa16.08■□□□□ 0.17
SLC3A1-202ENST00000409229 ANP32AP39687 249 aaKnown RBP16.07■□□□□ 0.16
SLC3A1-202ENST00000409229 PPP4R2Q9NY27 417 aa16.07■□□□□ 0.16
SLC3A1-202ENST00000409229 ABCC9O60706 1549 aa16.06■□□□□ 0.16
SLC3A1-202ENST00000409229 IPO9Q96P70 1041 aaKnown RBP16.05■□□□□ 0.16
SLC3A1-202ENST00000409229 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
SLC3A1-202ENST00000409229 ANP32CO43423 234 aa16.02■□□□□ 0.16
SLC3A1-202ENST00000409229 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.15
SLC3A1-202ENST00000409229 NEFMP07197 916 aa16.01■□□□□ 0.15
SLC3A1-202ENST00000409229 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
SLC3A1-202ENST00000409229 ZMYND15Q9H091 742 aa16■□□□□ 0.15
SLC3A1-202ENST00000409229 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
SLC3A1-202ENST00000409229 WASHC2AQ641Q2 1341 aa15.99■□□□□ 0.15
SLC3A1-202ENST00000409229 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
SLC3A1-202ENST00000409229 C11orf95C9JLR9 678 aaPredicted RBP15.98■□□□□ 0.15
SLC3A1-202ENST00000409229 GLIPR1L2Q4G1C9 344 aa15.98■□□□□ 0.15
SLC3A1-202ENST00000409229 HIRIP3Q9BW71 556 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms