RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
APLF-201ENST00000303795 DCAF8L2P0C7V8 631 aa21.27■■□□□ 1
APLF-201ENST00000303795 SHROOM4Q9ULL8 1493 aa20.77■□□□□ 0.92
APLF-201ENST00000303795 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
APLF-201ENST00000303795 EHMT2Q96KQ7 1210 aa20.12■□□□□ 0.81
APLF-201ENST00000303795 HRCP23327 699 aa19.92■□□□□ 0.78
APLF-201ENST00000303795 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
APLF-201ENST00000303795 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
APLF-201ENST00000303795 PCGF6Q9BYE7 350 aa19.4■□□□□ 0.7
APLF-201ENST00000303795 PPARGC1BQ86YN6 1023 aaKnown RBP19.39■□□□□ 0.7
APLF-201ENST00000303795 TTBK1Q5TCY1 1321 aaPredicted RBP19.32■□□□□ 0.68
APLF-201ENST00000303795 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
APLF-201ENST00000303795 DCAF1Q9Y4B6 1507 aa19.16■□□□□ 0.66
APLF-201ENST00000303795 LOC105371045A0A1W2PR82 267 aa19.1■□□□□ 0.65
APLF-201ENST00000303795 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
APLF-201ENST00000303795 SCAF1Q9H7N4 1312 aaKnown RBP19.05■□□□□ 0.64
APLF-201ENST00000303795 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
APLF-201ENST00000303795 RANGAP1P46060 587 aaPredicted RBP18.92■□□□□ 0.62
APLF-201ENST00000303795 ZCCHC6Q5VYS8 1495 aaKnown RBP18.8■□□□□ 0.6
APLF-201ENST00000303795 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
APLF-201ENST00000303795 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
APLF-201ENST00000303795 MYT1Q01538 1121 aa18.51■□□□□ 0.55
APLF-201ENST00000303795 ABCC9O60706 1549 aa18.47■□□□□ 0.55
APLF-201ENST00000303795 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
APLF-201ENST00000303795 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
APLF-201ENST00000303795 ACIN1Q9UKV3 1341 aaKnown RBP18.33■□□□□ 0.53
APLF-201ENST00000303795 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
APLF-201ENST00000303795 NEUROD1Q13562 356 aa18.31■□□□□ 0.52
APLF-201ENST00000303795 PABPN1Q86U42 306 aaKnown RBP eCLIP18.25■□□□□ 0.51
APLF-201ENST00000303795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.2■□□□□ 0.5
APLF-201ENST00000303795 YTHDC1Q96MU7 727 aaKnown RBP18.17■□□□□ 0.5
APLF-201ENST00000303795 APLP2Q06481 763 aa18.16■□□□□ 0.5
APLF-201ENST00000303795 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
APLF-201ENST00000303795 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
APLF-201ENST00000303795 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
APLF-201ENST00000303795 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
APLF-201ENST00000303795 ITGAEP38570 1179 aa18.02■□□□□ 0.48
APLF-201ENST00000303795 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
APLF-201ENST00000303795 DIEXFQ68CQ4 756 aaKnown RBP17.76■□□□□ 0.43
APLF-201ENST00000303795 RB1CC1Q8TDY2 1594 aa17.73■□□□□ 0.43
APLF-201ENST00000303795 EIF4G1Q04637 1599 aaKnown RBP17.69■□□□□ 0.42
APLF-201ENST00000303795 CNGB1Q14028 1251 aaPredicted RBP17.65■□□□□ 0.42
APLF-201ENST00000303795 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
APLF-201ENST00000303795 NACADO15069 1562 aa17.59■□□□□ 0.41
APLF-201ENST00000303795 WRNQ14191 1432 aaPredicted RBP eCLIP17.56■□□□□ 0.4
APLF-201ENST00000303795 BCL11AQ9H165 835 aa17.53■□□□□ 0.4
APLF-201ENST00000303795 P3H3Q8IVL6 736 aa17.5■□□□□ 0.39
APLF-201ENST00000303795 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
APLF-201ENST00000303795 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
APLF-201ENST00000303795 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
APLF-201ENST00000303795 CECR2Q9BXF3 1484 aa17.39■□□□□ 0.37
APLF-201ENST00000303795 ZNF316A6NFI3 1004 aaPredicted RBP17.38■□□□□ 0.37
APLF-201ENST00000303795 MIER1Q8N108 512 aa17.38■□□□□ 0.37
APLF-201ENST00000303795 ANP32EQ9BTT0 268 aa17.37■□□□□ 0.37
APLF-201ENST00000303795 TSHZ2Q9NRE2 1034 aa17.35■□□□□ 0.37
APLF-201ENST00000303795 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
APLF-201ENST00000303795 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
APLF-201ENST00000303795 POLR3GLQ9BT43 218 aa17.31■□□□□ 0.36
APLF-201ENST00000303795 SUPT16HQ9Y5B9 1047 aaKnown RBP17.3■□□□□ 0.36
APLF-201ENST00000303795 BCANQ96GW7 911 aa17.24■□□□□ 0.35
APLF-201ENST00000303795 HIRIP3Q9BW71 556 aaPredicted RBP17.19■□□□□ 0.34
APLF-201ENST00000303795 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
APLF-201ENST00000303795 ERICH6Q7L0X2 663 aa17.15■□□□□ 0.34
APLF-201ENST00000303795 WIZO95785 1651 aa17.14■□□□□ 0.33
APLF-201ENST00000303795 CEP162Q5TB80 1403 aa17.12■□□□□ 0.33
APLF-201ENST00000303795 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
APLF-201ENST00000303795 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
APLF-201ENST00000303795 PRKCSHP14314 528 aaPredicted RBP17.11■□□□□ 0.33
APLF-201ENST00000303795 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
APLF-201ENST00000303795 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
APLF-201ENST00000303795 SOGA1O94964 1423 aa17.05■□□□□ 0.32
APLF-201ENST00000303795 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.31
APLF-201ENST00000303795 FBLN2P98095 1184 aa17.01■□□□□ 0.31
APLF-201ENST00000303795 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
APLF-201ENST00000303795 TRIM52Q96A61 297 aa17■□□□□ 0.31
APLF-201ENST00000303795 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
APLF-201ENST00000303795 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
APLF-201ENST00000303795 NEFLP07196 543 aa16.96■□□□□ 0.31
APLF-201ENST00000303795 MSH5O43196 834 aa16.93■□□□□ 0.3
APLF-201ENST00000303795 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
APLF-201ENST00000303795 CHIC2Q9UKJ5 165 aa16.9■□□□□ 0.3
APLF-201ENST00000303795 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
APLF-201ENST00000303795 KIF21BO75037 1637 aa16.84■□□□□ 0.29
APLF-201ENST00000303795 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
APLF-201ENST00000303795 CLIP1P30622 1438 aa16.83■□□□□ 0.28
APLF-201ENST00000303795 CUX2O14529 1486 aa16.82■□□□□ 0.28
APLF-201ENST00000303795 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
APLF-201ENST00000303795 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
APLF-201ENST00000303795 FKBP8Q14318 412 aa16.8■□□□□ 0.28
APLF-201ENST00000303795 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
APLF-201ENST00000303795 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
APLF-201ENST00000303795 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
APLF-201ENST00000303795 SIN3AQ96ST3 1273 aa16.77■□□□□ 0.28
APLF-201ENST00000303795 TOP2AP11388 1531 aaKnown RBP16.77■□□□□ 0.27
APLF-201ENST00000303795 EEA1Q15075 1411 aa16.75■□□□□ 0.27
APLF-201ENST00000303795 KCNH8Q96L42 1107 aa16.75■□□□□ 0.27
APLF-201ENST00000303795 GOLGA3Q08378 1498 aa16.72■□□□□ 0.27
APLF-201ENST00000303795 IRX6P78412 446 aaPredicted RBP16.72■□□□□ 0.27
APLF-201ENST00000303795 MAPKBP1O60336 1514 aa16.69■□□□□ 0.26
APLF-201ENST00000303795 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms