Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.01□□□□□ -0.33
APOA1P02647 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.01□□□□□ -0.33
APOA1P02647 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APOA1P02647 KRT18P43-201ENST00000469825 1281 ntBASIC13.01□□□□□ -0.33
APOA1P02647 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.01□□□□□ -0.33
APOA1P02647 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
APOA1P02647 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.01□□□□□ -0.33
APOA1P02647 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 IGHV3-62-201ENST00000520057 340 ntBASIC13.01□□□□□ -0.33
APOA1P02647 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.01□□□□□ -0.33
APOA1P02647 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.01□□□□□ -0.33
APOA1P02647 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.01□□□□□ -0.33
APOA1P02647 AC243562.1-201ENST00000560672 389 ntBASIC13.01□□□□□ -0.33
APOA1P02647 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.01□□□□□ -0.33
APOA1P02647 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.01□□□□□ -0.33
APOA1P02647 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.01□□□□□ -0.33
APOA1P02647 AC105021.1-202ENST00000570572 669 ntBASIC13.01□□□□□ -0.33
APOA1P02647 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.01□□□□□ -0.33
APOA1P02647 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.01□□□□□ -0.33
APOA1P02647 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.01□□□□□ -0.33
APOA1P02647 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
APOA1P02647 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.01□□□□□ -0.33
APOA1P02647 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.01□□□□□ -0.33
APOA1P02647 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.01□□□□□ -0.33
APOA1P02647 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
APOA1P02647 AC015819.3-201ENST00000624305 2674 ntBASIC13.01□□□□□ -0.33
APOA1P02647 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOA1P02647 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOA1P02647 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOA1P02647 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC13□□□□□ -0.33
APOA1P02647 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
APOA1P02647 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13□□□□□ -0.33
APOA1P02647 LINC00567-201ENST00000569854 3409 ntBASIC13□□□□□ -0.33
APOA1P02647 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13□□□□□ -0.33
APOA1P02647 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
APOA1P02647 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13□□□□□ -0.33
APOA1P02647 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13□□□□□ -0.33
APOA1P02647 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13□□□□□ -0.33
APOA1P02647 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
APOA1P02647 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13□□□□□ -0.33
APOA1P02647 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
APOA1P02647 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13□□□□□ -0.33
APOA1P02647 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
APOA1P02647 AC011840.2-201ENST00000563063 1520 ntBASIC13□□□□□ -0.33
APOA1P02647 CLK3P2-201ENST00000427566 1453 ntBASIC13□□□□□ -0.33
APOA1P02647 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
APOA1P02647 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13□□□□□ -0.33
APOA1P02647 SPCS2P4-201ENST00000436160 681 ntBASIC13□□□□□ -0.33
APOA1P02647 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13□□□□□ -0.33
APOA1P02647 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13□□□□□ -0.33
APOA1P02647 AC093909.1-201ENST00000504731 1122 ntBASIC13□□□□□ -0.33
APOA1P02647 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13□□□□□ -0.33
APOA1P02647 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13□□□□□ -0.33
APOA1P02647 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13□□□□□ -0.33
APOA1P02647 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13□□□□□ -0.33
APOA1P02647 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13□□□□□ -0.33
APOA1P02647 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
APOA1P02647 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13□□□□□ -0.33
APOA1P02647 AC084121.4-201ENST00000641598 221 ntBASIC13□□□□□ -0.33
APOA1P02647 AF228730.8-201ENST00000642140 221 ntBASIC13□□□□□ -0.33
APOA1P02647 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 AL031719.1-201ENST00000623365 2587 ntBASIC13□□□□□ -0.33
APOA1P02647 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13□□□□□ -0.33
APOA1P02647 API5-203ENST00000455725 2257 ntTSL 2 BASIC13□□□□□ -0.33
APOA1P02647 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
APOA1P02647 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOA1P02647 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.99□□□□□ -0.33
APOA1P02647 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
APOA1P02647 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOA1P02647 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms