RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 NISCHQ9Y2I1 1504 aa24.7■■□□□ 1.55
PCMTD1-208ENST00000544451 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
PCMTD1-208ENST00000544451 SUPT5HO00267 1087 aaKnown RBP22.92■■□□□ 1.26
PCMTD1-208ENST00000544451 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
PCMTD1-208ENST00000544451 PCGF6Q9BYE7 350 aa21.93■■□□□ 1.1
PCMTD1-208ENST00000544451 EHMT2Q96KQ7 1210 aa21.81■■□□□ 1.08
PCMTD1-208ENST00000544451 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
PCMTD1-208ENST00000544451 PPARGC1BQ86YN6 1023 aaKnown RBP21.5■■□□□ 1.03
PCMTD1-208ENST00000544451 HRCP23327 699 aa21.44■■□□□ 1.02
PCMTD1-208ENST00000544451 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
PCMTD1-208ENST00000544451 LOC105371045A0A1W2PR82 267 aa21.44■■□□□ 1.02
PCMTD1-208ENST00000544451 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.96
PCMTD1-208ENST00000544451 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
PCMTD1-208ENST00000544451 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
PCMTD1-208ENST00000544451 TRIM26Q12899 539 aaPredicted RBP20.87■□□□□ 0.93
PCMTD1-208ENST00000544451 ZCCHC6Q5VYS8 1495 aaKnown RBP20.74■□□□□ 0.91
PCMTD1-208ENST00000544451 CCER1Q8TC90 406 aaPredicted RBP20.6■□□□□ 0.89
PCMTD1-208ENST00000544451 ZEB1P37275 1124 aaPredicted RBP20.54■□□□□ 0.88
PCMTD1-208ENST00000544451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.48■□□□□ 0.87
PCMTD1-208ENST00000544451 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
PCMTD1-208ENST00000544451 YTHDC1Q96MU7 727 aaKnown RBP20.33■□□□□ 0.84
PCMTD1-208ENST00000544451 DCAF1Q9Y4B6 1507 aa20.29■□□□□ 0.84
PCMTD1-208ENST00000544451 UBTFP17480 764 aaKnown RBP20.27■□□□□ 0.84
PCMTD1-208ENST00000544451 CCDC180Q9P1Z9 1646 aa20.15■□□□□ 0.82
PCMTD1-208ENST00000544451 CENPBP07199 599 aaPredicted RBP20.11■□□□□ 0.81
PCMTD1-208ENST00000544451 SCRIBQ14160 1630 aa20.08■□□□□ 0.81
PCMTD1-208ENST00000544451 SCAF1Q9H7N4 1312 aaKnown RBP20.08■□□□□ 0.8
PCMTD1-208ENST00000544451 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
PCMTD1-208ENST00000544451 ABCC9O60706 1549 aa20.05■□□□□ 0.8
PCMTD1-208ENST00000544451 DIEXFQ68CQ4 756 aaKnown RBP20.05■□□□□ 0.8
PCMTD1-208ENST00000544451 APLP2Q06481 763 aa20.04■□□□□ 0.8
PCMTD1-208ENST00000544451 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
PCMTD1-208ENST00000544451 GTF3C3Q9Y5Q9 886 aa19.96■□□□□ 0.79
PCMTD1-208ENST00000544451 RSF1Q96T23 1441 aaPredicted RBP19.94■□□□□ 0.78
PCMTD1-208ENST00000544451 NEUROD1Q13562 356 aa19.88■□□□□ 0.77
PCMTD1-208ENST00000544451 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.77
PCMTD1-208ENST00000544451 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
PCMTD1-208ENST00000544451 ITGAEP38570 1179 aa19.74■□□□□ 0.75
PCMTD1-208ENST00000544451 RB1CC1Q8TDY2 1594 aa19.71■□□□□ 0.75
PCMTD1-208ENST00000544451 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
PCMTD1-208ENST00000544451 ATP1B4Q9UN42 357 aaPredicted RBP19.61■□□□□ 0.73
PCMTD1-208ENST00000544451 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
PCMTD1-208ENST00000544451 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
PCMTD1-208ENST00000544451 MIER1Q8N108 512 aa19.47■□□□□ 0.71
PCMTD1-208ENST00000544451 MROH2BQ7Z745 1585 aa19.43■□□□□ 0.7
PCMTD1-208ENST00000544451 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
PCMTD1-208ENST00000544451 SOGA1O94964 1423 aa19.35■□□□□ 0.69
PCMTD1-208ENST00000544451 BCANQ96GW7 911 aa19.33■□□□□ 0.68
PCMTD1-208ENST00000544451 ABCC8Q09428 1581 aa19.33■□□□□ 0.68
PCMTD1-208ENST00000544451 WIZO95785 1651 aa19.29■□□□□ 0.68
PCMTD1-208ENST00000544451 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
PCMTD1-208ENST00000544451 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
PCMTD1-208ENST00000544451 RUSC2Q8N2Y8 1516 aa19.14■□□□□ 0.65
PCMTD1-208ENST00000544451 P3H3Q8IVL6 736 aa19.12■□□□□ 0.65
PCMTD1-208ENST00000544451 TNIKQ9UKE5 1360 aa19.11■□□□□ 0.65
PCMTD1-208ENST00000544451 CNGB1Q14028 1251 aaPredicted RBP19.11■□□□□ 0.65
PCMTD1-208ENST00000544451 CLIP1P30622 1438 aa19.1■□□□□ 0.65
PCMTD1-208ENST00000544451 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.64
PCMTD1-208ENST00000544451 NEFLP07196 543 aa19.07■□□□□ 0.64
PCMTD1-208ENST00000544451 MYT1Q01538 1121 aa19.06■□□□□ 0.64
PCMTD1-208ENST00000544451 NACADO15069 1562 aa19.03■□□□□ 0.64
PCMTD1-208ENST00000544451 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
PCMTD1-208ENST00000544451 WRNQ14191 1432 aaPredicted RBP eCLIP19.01■□□□□ 0.63
PCMTD1-208ENST00000544451 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
PCMTD1-208ENST00000544451 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
PCMTD1-208ENST00000544451 KANK4Q5T7N3 995 aaPredicted RBP18.9■□□□□ 0.62
PCMTD1-208ENST00000544451 TRIM52Q96A61 297 aa18.9■□□□□ 0.62
PCMTD1-208ENST00000544451 FKBP8Q14318 412 aa18.89■□□□□ 0.62
PCMTD1-208ENST00000544451 ERICH6Q7L0X2 663 aa18.86■□□□□ 0.61
PCMTD1-208ENST00000544451 EEA1Q15075 1411 aa18.85■□□□□ 0.61
PCMTD1-208ENST00000544451 POLR3GLQ9BT43 218 aa18.85■□□□□ 0.61
PCMTD1-208ENST00000544451 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
PCMTD1-208ENST00000544451 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
PCMTD1-208ENST00000544451 SUPT16HQ9Y5B9 1047 aaKnown RBP18.81■□□□□ 0.6
PCMTD1-208ENST00000544451 ARID3CA6NKF2 412 aa18.8■□□□□ 0.6
PCMTD1-208ENST00000544451 SIN3AQ96ST3 1273 aa18.8■□□□□ 0.6
PCMTD1-208ENST00000544451 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
PCMTD1-208ENST00000544451 ANP32CO43423 234 aa18.75■□□□□ 0.59
PCMTD1-208ENST00000544451 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
PCMTD1-208ENST00000544451 IRX6P78412 446 aaPredicted RBP18.73■□□□□ 0.59
PCMTD1-208ENST00000544451 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
PCMTD1-208ENST00000544451 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
PCMTD1-208ENST00000544451 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
PCMTD1-208ENST00000544451 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
PCMTD1-208ENST00000544451 SENP3-EIF4A1A0A087X0R7 540 aa18.62■□□□□ 0.57
PCMTD1-208ENST00000544451 CHIC2Q9UKJ5 165 aa18.6■□□□□ 0.57
PCMTD1-208ENST00000544451 HNRNPUQ00839 825 aaKnown RBP eCLIP18.6■□□□□ 0.57
PCMTD1-208ENST00000544451 DHX57Q6P158 1386 aaKnown RBP18.59■□□□□ 0.57
PCMTD1-208ENST00000544451 ZNF326Q5BKZ1 582 aaKnown RBP18.55■□□□□ 0.56
PCMTD1-208ENST00000544451 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
PCMTD1-208ENST00000544451 TSHZ2Q9NRE2 1034 aa18.53■□□□□ 0.56
PCMTD1-208ENST00000544451 TONSLQ96HA7 1378 aa18.52■□□□□ 0.56
PCMTD1-208ENST00000544451 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
PCMTD1-208ENST00000544451 RAB3GAP2Q9H2M9 1393 aa18.48■□□□□ 0.55
PCMTD1-208ENST00000544451 KIF27Q86VH2 1401 aa18.46■□□□□ 0.55
PCMTD1-208ENST00000544451 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
PCMTD1-208ENST00000544451 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
PCMTD1-208ENST00000544451 SYNJ1O43426 1573 aa18.45■□□□□ 0.54
PCMTD1-208ENST00000544451 CDK11AQ9UQ88 783 aaPredicted RBP18.44■□□□□ 0.54
PCMTD1-208ENST00000544451 ANP32EQ9BTT0 268 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms