RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 DCAF8L2P0C7V8 631 aa20.39■□□□□ 0.86
SHPRH-202ENST00000367503 NISCHQ9Y2I1 1504 aa20.24■□□□□ 0.83
SHPRH-202ENST00000367503 PELP1Q8IZL8 1130 aaKnown RBP20■□□□□ 0.79
SHPRH-202ENST00000367503 SUPT5HO00267 1087 aaKnown RBP19.88■□□□□ 0.77
SHPRH-202ENST00000367503 MYT1Q01538 1121 aa19.77■□□□□ 0.76
SHPRH-202ENST00000367503 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
SHPRH-202ENST00000367503 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.7
SHPRH-202ENST00000367503 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
SHPRH-202ENST00000367503 ZEB1P37275 1124 aaPredicted RBP19.12■□□□□ 0.65
SHPRH-202ENST00000367503 HRCP23327 699 aa19.03■□□□□ 0.64
SHPRH-202ENST00000367503 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
SHPRH-202ENST00000367503 ERICH6Q7L0X2 663 aa18.84■□□□□ 0.61
SHPRH-202ENST00000367503 APLP2Q06481 763 aa18.75■□□□□ 0.59
SHPRH-202ENST00000367503 CCER1Q8TC90 406 aaPredicted RBP18.67■□□□□ 0.58
SHPRH-202ENST00000367503 FAM9AQ8IZU1 332 aaPredicted RBP18.66■□□□□ 0.58
SHPRH-202ENST00000367503 YTHDC1Q96MU7 727 aaKnown RBP18.58■□□□□ 0.57
SHPRH-202ENST00000367503 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
SHPRH-202ENST00000367503 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
SHPRH-202ENST00000367503 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
SHPRH-202ENST00000367503 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
SHPRH-202ENST00000367503 NEFLP07196 543 aa18.37■□□□□ 0.53
SHPRH-202ENST00000367503 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
SHPRH-202ENST00000367503 UBTFP17480 764 aaKnown RBP18.12■□□□□ 0.49
SHPRH-202ENST00000367503 DIEXFQ68CQ4 756 aaKnown RBP18.06■□□□□ 0.48
SHPRH-202ENST00000367503 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
SHPRH-202ENST00000367503 RANGAP1P46060 587 aaPredicted RBP18.03■□□□□ 0.48
SHPRH-202ENST00000367503 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
SHPRH-202ENST00000367503 LOC105371045A0A1W2PR82 267 aa17.95■□□□□ 0.46
SHPRH-202ENST00000367503 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
SHPRH-202ENST00000367503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.79■□□□□ 0.44
SHPRH-202ENST00000367503 RTL5Q5HYW3 569 aaPredicted RBP17.78■□□□□ 0.44
SHPRH-202ENST00000367503 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
SHPRH-202ENST00000367503 DAXXQ9UER7 740 aaPredicted RBP17.68■□□□□ 0.42
SHPRH-202ENST00000367503 BCANQ96GW7 911 aa17.6■□□□□ 0.41
SHPRH-202ENST00000367503 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
SHPRH-202ENST00000367503 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
SHPRH-202ENST00000367503 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
SHPRH-202ENST00000367503 ITGAEP38570 1179 aa17.47■□□□□ 0.39
SHPRH-202ENST00000367503 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
SHPRH-202ENST00000367503 CLSPNQ9HAW4 1339 aa17.46■□□□□ 0.39
SHPRH-202ENST00000367503 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
SHPRH-202ENST00000367503 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
SHPRH-202ENST00000367503 ANP32EQ9BTT0 268 aa17.27■□□□□ 0.35
SHPRH-202ENST00000367503 EIF5BO60841 1220 aaKnown RBP17.25■□□□□ 0.35
SHPRH-202ENST00000367503 POLR3GLQ9BT43 218 aa17.22■□□□□ 0.35
SHPRH-202ENST00000367503 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
SHPRH-202ENST00000367503 FKBP8Q14318 412 aa17.18■□□□□ 0.34
SHPRH-202ENST00000367503 ANP32AP39687 249 aaKnown RBP17.16■□□□□ 0.34
SHPRH-202ENST00000367503 ANP32CO43423 234 aa17.16■□□□□ 0.34
SHPRH-202ENST00000367503 GLIPR1L2Q4G1C9 344 aa17.12■□□□□ 0.33
SHPRH-202ENST00000367503 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.32
SHPRH-202ENST00000367503 FAM50AQ14320 339 aaKnown RBP17.07■□□□□ 0.32
SHPRH-202ENST00000367503 NBR1Q14596 966 aa16.99■□□□□ 0.31
SHPRH-202ENST00000367503 MIER1Q8N108 512 aa16.99■□□□□ 0.31
SHPRH-202ENST00000367503 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
SHPRH-202ENST00000367503 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
SHPRH-202ENST00000367503 NPM2Q86SE8 214 aaKnown RBP16.92■□□□□ 0.3
SHPRH-202ENST00000367503 ABCC9O60706 1549 aa16.87■□□□□ 0.29
SHPRH-202ENST00000367503 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
SHPRH-202ENST00000367503 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
SHPRH-202ENST00000367503 MYO15BQ96JP2 1530 aa16.83■□□□□ 0.28
SHPRH-202ENST00000367503 ZCCHC6Q5VYS8 1495 aaKnown RBP16.83■□□□□ 0.28
SHPRH-202ENST00000367503 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
SHPRH-202ENST00000367503 HNRNPUQ00839 825 aaKnown RBP eCLIP16.76■□□□□ 0.27
SHPRH-202ENST00000367503 SUPT16HQ9Y5B9 1047 aaKnown RBP16.76■□□□□ 0.27
SHPRH-202ENST00000367503 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
SHPRH-202ENST00000367503 DDX10Q13206 875 aaKnown RBP16.71■□□□□ 0.27
SHPRH-202ENST00000367503 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
SHPRH-202ENST00000367503 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
SHPRH-202ENST00000367503 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
SHPRH-202ENST00000367503 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
SHPRH-202ENST00000367503 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
SHPRH-202ENST00000367503 DEKP35659 375 aaKnown RBP16.62■□□□□ 0.25
SHPRH-202ENST00000367503 TONSLQ96HA7 1378 aa16.58■□□□□ 0.24
SHPRH-202ENST00000367503 P3H3Q8IVL6 736 aa16.58■□□□□ 0.24
SHPRH-202ENST00000367503 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
SHPRH-202ENST00000367503 FAM9BQ8IZU0 186 aa16.54■□□□□ 0.24
SHPRH-202ENST00000367503 NOP58Q9Y2X3 529 aaKnown RBP16.54■□□□□ 0.24
SHPRH-202ENST00000367503 NEFMP07197 916 aa16.54■□□□□ 0.24
SHPRH-202ENST00000367503 TSHZ2Q9NRE2 1034 aa16.53■□□□□ 0.24
SHPRH-202ENST00000367503 SCRIBQ14160 1630 aa16.51■□□□□ 0.23
SHPRH-202ENST00000367503 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
SHPRH-202ENST00000367503 ERICH6BQ5W0A0 696 aa16.5■□□□□ 0.23
SHPRH-202ENST00000367503 ARXQ96QS3 562 aa16.49■□□□□ 0.23
SHPRH-202ENST00000367503 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
SHPRH-202ENST00000367503 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
SHPRH-202ENST00000367503 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.22
SHPRH-202ENST00000367503 EEA1Q15075 1411 aa16.41■□□□□ 0.22
SHPRH-202ENST00000367503 CLIP1P30622 1438 aa16.4■□□□□ 0.22
SHPRH-202ENST00000367503 PPP4R2Q9NY27 417 aa16.4■□□□□ 0.22
SHPRH-202ENST00000367503 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
SHPRH-202ENST00000367503 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
SHPRH-202ENST00000367503 NAP1L5Q96NT1 182 aaPredicted RBP16.37■□□□□ 0.21
SHPRH-202ENST00000367503 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
SHPRH-202ENST00000367503 FBLN2P98095 1184 aa16.36■□□□□ 0.21
SHPRH-202ENST00000367503 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
SHPRH-202ENST00000367503 ARID3CA6NKF2 412 aa16.35■□□□□ 0.21
SHPRH-202ENST00000367503 ZNF777Q9ULD5 760 aaPredicted RBP16.34■□□□□ 0.21
SHPRH-202ENST00000367503 TRIM44Q96DX7 344 aaPredicted RBP16.34■□□□□ 0.21
SHPRH-202ENST00000367503 CEP162Q5TB80 1403 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms