Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 BX005266.1-201ENST00000473402 457 ntBASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC005412.3-201ENST00000580309 715 ntBASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 LINC01711-201ENST00000598340 967 ntBASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AL022326.1-202ENST00000641533 845 ntBASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC009549.1-201ENST00000603468 1686 ntBASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC093525.7-201ENST00000569852 3626 ntBASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CICP2-201ENST00000420675 2328 ntBASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 NLRP2-209ENST00000537859 3507 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 HMGN1P19-201ENST00000436976 333 ntBASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 KRT18P31-201ENST00000506277 1292 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms