RNA–Protein interactions for RNA: ENST00000262429.8

ATP2C2-201, Transcript of ATPase secretory pathway Ca2+ transporting 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2C2, Length 3,376 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C2-201ENST00000262429 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
ATP2C2-201ENST00000262429 CCDC180Q9P1Z9 1646 aa23.63■■□□□ 1.37
ATP2C2-201ENST00000262429 ZCCHC6Q5VYS8 1495 aaKnown RBP23.14■■□□□ 1.3
ATP2C2-201ENST00000262429 SHROOM4Q9ULL8 1493 aa23.1■■□□□ 1.29
ATP2C2-201ENST00000262429 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
ATP2C2-201ENST00000262429 ABCC9O60706 1549 aa22.51■■□□□ 1.19
ATP2C2-201ENST00000262429 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
ATP2C2-201ENST00000262429 SUPT5HO00267 1087 aaKnown RBP22.32■■□□□ 1.16
ATP2C2-201ENST00000262429 SCRIBQ14160 1630 aa22.14■■□□□ 1.14
ATP2C2-201ENST00000262429 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
ATP2C2-201ENST00000262429 NACADO15069 1562 aa21.98■■□□□ 1.11
ATP2C2-201ENST00000262429 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
ATP2C2-201ENST00000262429 CECR2Q9BXF3 1484 aa21.58■■□□□ 1.05
ATP2C2-201ENST00000262429 UNC13AQ9UPW8 1703 aa21.56■■□□□ 1.04
ATP2C2-201ENST00000262429 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
ATP2C2-201ENST00000262429 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
ATP2C2-201ENST00000262429 MROH2BQ7Z745 1585 aa21.41■■□□□ 1.02
ATP2C2-201ENST00000262429 CHIC1Q5VXU3 224 aa21.39■■□□□ 1.01
ATP2C2-201ENST00000262429 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
ATP2C2-201ENST00000262429 WIZO95785 1651 aa21.29■■□□□ 1
ATP2C2-201ENST00000262429 BAZ1AQ9NRL2 1556 aaPredicted RBP21.13■□□□□ 0.97
ATP2C2-201ENST00000262429 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
ATP2C2-201ENST00000262429 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
ATP2C2-201ENST00000262429 LOC105371045A0A1W2PR82 267 aa20.81■□□□□ 0.92
ATP2C2-201ENST00000262429 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
ATP2C2-201ENST00000262429 TRIM41Q8WV44 630 aa20.77■□□□□ 0.92
ATP2C2-201ENST00000262429 SMARCA2P51531 1590 aa20.77■□□□□ 0.91
ATP2C2-201ENST00000262429 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
ATP2C2-201ENST00000262429 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
ATP2C2-201ENST00000262429 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
ATP2C2-201ENST00000262429 FAM9AQ8IZU1 332 aaPredicted RBP20.67■□□□□ 0.9
ATP2C2-201ENST00000262429 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
ATP2C2-201ENST00000262429 EHMT2Q96KQ7 1210 aa20.58■□□□□ 0.88
ATP2C2-201ENST00000262429 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
ATP2C2-201ENST00000262429 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
ATP2C2-201ENST00000262429 HRCP23327 699 aa20.31■□□□□ 0.84
ATP2C2-201ENST00000262429 HMGXB3Q12766 1538 aa20.29■□□□□ 0.84
ATP2C2-201ENST00000262429 SOGA1O94964 1423 aa20.26■□□□□ 0.83
ATP2C2-201ENST00000262429 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
ATP2C2-201ENST00000262429 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
ATP2C2-201ENST00000262429 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
ATP2C2-201ENST00000262429 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
ATP2C2-201ENST00000262429 PCGF6Q9BYE7 350 aa20.09■□□□□ 0.81
ATP2C2-201ENST00000262429 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
ATP2C2-201ENST00000262429 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.8
ATP2C2-201ENST00000262429 CFTRP13569 1480 aa20.04■□□□□ 0.8
ATP2C2-201ENST00000262429 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
ATP2C2-201ENST00000262429 TOP2BQ02880 1626 aa19.96■□□□□ 0.79
ATP2C2-201ENST00000262429 CUX1P39880 1505 aa19.96■□□□□ 0.79
ATP2C2-201ENST00000262429 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
ATP2C2-201ENST00000262429 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
ATP2C2-201ENST00000262429 NESP48681 1621 aa19.91■□□□□ 0.78
ATP2C2-201ENST00000262429 BIVM-ERCC5R4GMW8 1640 aa19.9■□□□□ 0.78
ATP2C2-201ENST00000262429 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
ATP2C2-201ENST00000262429 EEA1Q15075 1411 aa19.86■□□□□ 0.77
ATP2C2-201ENST00000262429 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
ATP2C2-201ENST00000262429 CEP162Q5TB80 1403 aa19.8■□□□□ 0.76
ATP2C2-201ENST00000262429 TNIKQ9UKE5 1360 aa19.78■□□□□ 0.76
ATP2C2-201ENST00000262429 RAPGEF2Q9Y4G8 1499 aa19.78■□□□□ 0.76
ATP2C2-201ENST00000262429 GOLGA3Q08378 1498 aa19.77■□□□□ 0.76
ATP2C2-201ENST00000262429 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.75
ATP2C2-201ENST00000262429 FANCD2Q9BXW9 1451 aa19.76■□□□□ 0.75
ATP2C2-201ENST00000262429 RANGAP1P46060 587 aaPredicted RBP19.76■□□□□ 0.75
ATP2C2-201ENST00000262429 TTBK1Q5TCY1 1321 aaPredicted RBP19.72■□□□□ 0.75
ATP2C2-201ENST00000262429 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
ATP2C2-201ENST00000262429 KIF21BO75037 1637 aa19.71■□□□□ 0.75
ATP2C2-201ENST00000262429 FGD5Q6ZNL6 1462 aa19.68■□□□□ 0.74
ATP2C2-201ENST00000262429 CUX2O14529 1486 aa19.62■□□□□ 0.73
ATP2C2-201ENST00000262429 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
ATP2C2-201ENST00000262429 RAD54L2Q9Y4B4 1467 aa19.61■□□□□ 0.73
ATP2C2-201ENST00000262429 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
ATP2C2-201ENST00000262429 TOPBP1Q92547 1522 aa19.58■□□□□ 0.72
ATP2C2-201ENST00000262429 LAMC3Q9Y6N6 1575 aa19.58■□□□□ 0.72
ATP2C2-201ENST00000262429 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
ATP2C2-201ENST00000262429 CLIP1P30622 1438 aa19.55■□□□□ 0.72
ATP2C2-201ENST00000262429 IGF1RP08069 1367 aa19.54■□□□□ 0.72
ATP2C2-201ENST00000262429 KIF21AQ7Z4S6 1674 aa19.54■□□□□ 0.72
ATP2C2-201ENST00000262429 DNMBPQ6XZF7 1577 aa19.54■□□□□ 0.72
ATP2C2-201ENST00000262429 POLA1P09884 1462 aaPredicted RBP19.53■□□□□ 0.72
ATP2C2-201ENST00000262429 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
ATP2C2-201ENST00000262429 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
ATP2C2-201ENST00000262429 CARMIL1Q5VZK9 1371 aa19.41■□□□□ 0.7
ATP2C2-201ENST00000262429 MYT1Q01538 1121 aa19.4■□□□□ 0.7
ATP2C2-201ENST00000262429 TDRD9Q8NDG6 1382 aaKnown RBP19.4■□□□□ 0.7
ATP2C2-201ENST00000262429 ABCA10Q8WWZ4 1543 aa19.4■□□□□ 0.7
ATP2C2-201ENST00000262429 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
ATP2C2-201ENST00000262429 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
ATP2C2-201ENST00000262429 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
ATP2C2-201ENST00000262429 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
ATP2C2-201ENST00000262429 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
ATP2C2-201ENST00000262429 P3H3Q8IVL6 736 aa19.26■□□□□ 0.67
ATP2C2-201ENST00000262429 TARBP1Q13395 1621 aaKnown RBP19.24■□□□□ 0.67
ATP2C2-201ENST00000262429 ABCA5Q8WWZ7 1642 aa19.23■□□□□ 0.67
ATP2C2-201ENST00000262429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
ATP2C2-201ENST00000262429 KANK4Q5T7N3 995 aaPredicted RBP19.23■□□□□ 0.67
ATP2C2-201ENST00000262429 GAPVD1Q14C86 1478 aa19.22■□□□□ 0.67
ATP2C2-201ENST00000262429 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
ATP2C2-201ENST00000262429 AQRO60306 1485 aaKnown RBP eCLIP19.21■□□□□ 0.67
ATP2C2-201ENST00000262429 APLP2Q06481 763 aa19.18■□□□□ 0.66
ATP2C2-201ENST00000262429 ZNF608Q9ULD9 1512 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms