RNA–Protein interactions for RNA: ENST00000337471.8

PRAMENP-201, Transcript of PRAME N-terminal-like, pseudogene, humanhuman

TSL 2 BASIC

Gene PRAMENP, Length 3,038 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMENP-201ENST00000337471 NISCHQ9Y2I1 1504 aa25.16■■□□□ 1.62
PRAMENP-201ENST00000337471 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
PRAMENP-201ENST00000337471 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
PRAMENP-201ENST00000337471 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
PRAMENP-201ENST00000337471 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
PRAMENP-201ENST00000337471 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
PRAMENP-201ENST00000337471 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
PRAMENP-201ENST00000337471 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
PRAMENP-201ENST00000337471 HRCP23327 699 aa20.99■□□□□ 0.95
PRAMENP-201ENST00000337471 LOC105371045A0A1W2PR82 267 aa20.95■□□□□ 0.94
PRAMENP-201ENST00000337471 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
PRAMENP-201ENST00000337471 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
PRAMENP-201ENST00000337471 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
PRAMENP-201ENST00000337471 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
PRAMENP-201ENST00000337471 TRIM26Q12899 539 aaPredicted RBP20.34■□□□□ 0.85
PRAMENP-201ENST00000337471 TRIM41Q8WV44 630 aa20.34■□□□□ 0.85
PRAMENP-201ENST00000337471 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.85
PRAMENP-201ENST00000337471 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
PRAMENP-201ENST00000337471 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
PRAMENP-201ENST00000337471 ABCC9O60706 1549 aa20.06■□□□□ 0.8
PRAMENP-201ENST00000337471 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
PRAMENP-201ENST00000337471 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
PRAMENP-201ENST00000337471 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
PRAMENP-201ENST00000337471 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
PRAMENP-201ENST00000337471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
PRAMENP-201ENST00000337471 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
PRAMENP-201ENST00000337471 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
PRAMENP-201ENST00000337471 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
PRAMENP-201ENST00000337471 WIZO95785 1651 aa19.63■□□□□ 0.73
PRAMENP-201ENST00000337471 UBTFP17480 764 aaKnown RBP19.45■□□□□ 0.7
PRAMENP-201ENST00000337471 NACADO15069 1562 aa19.45■□□□□ 0.7
PRAMENP-201ENST00000337471 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
PRAMENP-201ENST00000337471 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
PRAMENP-201ENST00000337471 RANGAP1P46060 587 aaPredicted RBP19.38■□□□□ 0.69
PRAMENP-201ENST00000337471 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
PRAMENP-201ENST00000337471 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
PRAMENP-201ENST00000337471 SOGA1O94964 1423 aa19.35■□□□□ 0.69
PRAMENP-201ENST00000337471 DIEXFQ68CQ4 756 aaKnown RBP19.35■□□□□ 0.69
PRAMENP-201ENST00000337471 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.68
PRAMENP-201ENST00000337471 CEP162Q5TB80 1403 aa19.27■□□□□ 0.67
PRAMENP-201ENST00000337471 RUSC2Q8N2Y8 1516 aa19.27■□□□□ 0.67
PRAMENP-201ENST00000337471 HNRNPUL2Q1KMD3 747 aaKnown RBP19.26■□□□□ 0.67
PRAMENP-201ENST00000337471 ACIN1Q9UKV3 1341 aaKnown RBP19.26■□□□□ 0.67
PRAMENP-201ENST00000337471 CSRNP3Q8WYN3 585 aa19.25■□□□□ 0.67
PRAMENP-201ENST00000337471 YTHDC1Q96MU7 727 aaKnown RBP19.24■□□□□ 0.67
PRAMENP-201ENST00000337471 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
PRAMENP-201ENST00000337471 EIF4G1Q04637 1599 aaKnown RBP19.14■□□□□ 0.65
PRAMENP-201ENST00000337471 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
PRAMENP-201ENST00000337471 PELP1Q8IZL8 1130 aaKnown RBP19.1■□□□□ 0.65
PRAMENP-201ENST00000337471 CENPBP07199 599 aaPredicted RBP19.09■□□□□ 0.65
PRAMENP-201ENST00000337471 TNIKQ9UKE5 1360 aa19.09■□□□□ 0.65
PRAMENP-201ENST00000337471 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
PRAMENP-201ENST00000337471 SMARCA4P51532 1647 aa19.08■□□□□ 0.64
PRAMENP-201ENST00000337471 ZNF316A6NFI3 1004 aaPredicted RBP19.04■□□□□ 0.64
PRAMENP-201ENST00000337471 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
PRAMENP-201ENST00000337471 APLP2Q06481 763 aa18.98■□□□□ 0.63
PRAMENP-201ENST00000337471 MIER1Q8N108 512 aa18.95■□□□□ 0.62
PRAMENP-201ENST00000337471 GOLGA3Q08378 1498 aa18.94■□□□□ 0.62
PRAMENP-201ENST00000337471 CLIP1P30622 1438 aa18.87■□□□□ 0.61
PRAMENP-201ENST00000337471 EEA1Q15075 1411 aa18.86■□□□□ 0.61
PRAMENP-201ENST00000337471 UNC13AQ9UPW8 1703 aa18.84■□□□□ 0.61
PRAMENP-201ENST00000337471 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
PRAMENP-201ENST00000337471 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
PRAMENP-201ENST00000337471 ITGAEP38570 1179 aa18.78■□□□□ 0.6
PRAMENP-201ENST00000337471 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.6
PRAMENP-201ENST00000337471 KANK4Q5T7N3 995 aaPredicted RBP18.7■□□□□ 0.58
PRAMENP-201ENST00000337471 VPS8Q8N3P4 1428 aa18.7■□□□□ 0.58
PRAMENP-201ENST00000337471 BICRAQ9NZM4 1560 aa18.69■□□□□ 0.58
PRAMENP-201ENST00000337471 BAZ1BQ9UIG0 1483 aaKnown RBP18.67■□□□□ 0.58
PRAMENP-201ENST00000337471 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
PRAMENP-201ENST00000337471 KIF21BO75037 1637 aa18.59■□□□□ 0.57
PRAMENP-201ENST00000337471 ATP1B4Q9UN42 357 aaPredicted RBP18.52■□□□□ 0.55
PRAMENP-201ENST00000337471 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
PRAMENP-201ENST00000337471 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
PRAMENP-201ENST00000337471 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
PRAMENP-201ENST00000337471 KCNH8Q96L42 1107 aa18.44■□□□□ 0.54
PRAMENP-201ENST00000337471 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
PRAMENP-201ENST00000337471 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
PRAMENP-201ENST00000337471 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
PRAMENP-201ENST00000337471 TOP2BQ02880 1626 aa18.37■□□□□ 0.53
PRAMENP-201ENST00000337471 PRXQ9BXM0 1461 aa18.36■□□□□ 0.53
PRAMENP-201ENST00000337471 BCANQ96GW7 911 aa18.34■□□□□ 0.53
PRAMENP-201ENST00000337471 SIN3AQ96ST3 1273 aa18.34■□□□□ 0.53
PRAMENP-201ENST00000337471 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.52
PRAMENP-201ENST00000337471 CCNB3Q8WWL7 1395 aa18.32■□□□□ 0.52
PRAMENP-201ENST00000337471 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
PRAMENP-201ENST00000337471 CUX1P39880 1505 aa18.31■□□□□ 0.52
PRAMENP-201ENST00000337471 DDX10Q13206 875 aaKnown RBP18.29■□□□□ 0.52
PRAMENP-201ENST00000337471 CLSPNQ9HAW4 1339 aa18.27■□□□□ 0.51
PRAMENP-201ENST00000337471 RAB3GAP2Q9H2M9 1393 aa18.26■□□□□ 0.51
PRAMENP-201ENST00000337471 ARHGAP35Q9NRY4 1499 aa18.26■□□□□ 0.51
PRAMENP-201ENST00000337471 CUX2O14529 1486 aa18.22■□□□□ 0.51
PRAMENP-201ENST00000337471 RRBP1Q9P2E9 1410 aaKnown RBP18.21■□□□□ 0.51
PRAMENP-201ENST00000337471 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
PRAMENP-201ENST00000337471 BIVM-ERCC5R4GMW8 1640 aa18.19■□□□□ 0.5
PRAMENP-201ENST00000337471 IGF1RP08069 1367 aa18.17■□□□□ 0.5
PRAMENP-201ENST00000337471 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.49
PRAMENP-201ENST00000337471 PHLDB1Q86UU1 1377 aa18.14■□□□□ 0.49
PRAMENP-201ENST00000337471 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
PRAMENP-201ENST00000337471 NCAPD3P42695 1498 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms