RNA–Protein interactions for RNA: ENST00000501817.6

AP001258.1-201, humanhuman

TSL 5 BASIC

Gene AP001258.1, Length 2,110 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001258.1-201ENST00000501817 NISCHQ9Y2I1 1504 aa31.31■■■□□ 2.6
AP001258.1-201ENST00000501817 AEBP2Q6ZN18 517 aaPredicted RBP29.38■■■□□ 2.29
AP001258.1-201ENST00000501817 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
AP001258.1-201ENST00000501817 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
AP001258.1-201ENST00000501817 ZCCHC6Q5VYS8 1495 aaKnown RBP26.27■■□□□ 1.8
AP001258.1-201ENST00000501817 ABCC9O60706 1549 aa26.04■■□□□ 1.76
AP001258.1-201ENST00000501817 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
AP001258.1-201ENST00000501817 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.73
AP001258.1-201ENST00000501817 MYO15BQ96JP2 1530 aa25.56■■□□□ 1.68
AP001258.1-201ENST00000501817 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
AP001258.1-201ENST00000501817 NACADO15069 1562 aa25.49■■□□□ 1.67
AP001258.1-201ENST00000501817 PHF23Q9BUL5 403 aaPredicted RBP25.39■■□□□ 1.66
AP001258.1-201ENST00000501817 RB1CC1Q8TDY2 1594 aa25.32■■□□□ 1.64
AP001258.1-201ENST00000501817 SCRIBQ14160 1630 aa25.21■■□□□ 1.63
AP001258.1-201ENST00000501817 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.59
AP001258.1-201ENST00000501817 SENP3Q9H4L4 574 aaPredicted RBP24.9■■□□□ 1.58
AP001258.1-201ENST00000501817 BICRAQ9NZM4 1560 aa24.64■■□□□ 1.53
AP001258.1-201ENST00000501817 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
AP001258.1-201ENST00000501817 SUPT5HO00267 1087 aaKnown RBP24.41■■□□□ 1.5
AP001258.1-201ENST00000501817 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.5
AP001258.1-201ENST00000501817 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
AP001258.1-201ENST00000501817 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
AP001258.1-201ENST00000501817 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
AP001258.1-201ENST00000501817 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
AP001258.1-201ENST00000501817 WIZO95785 1651 aa24.06■■□□□ 1.44
AP001258.1-201ENST00000501817 EIF4G1Q04637 1599 aaKnown RBP23.87■■□□□ 1.41
AP001258.1-201ENST00000501817 PEG3Q9GZU2 1588 aa23.8■■□□□ 1.4
AP001258.1-201ENST00000501817 ATAD2BQ9ULI0 1458 aa23.73■■□□□ 1.39
AP001258.1-201ENST00000501817 TOP2AP11388 1531 aaKnown RBP23.72■■□□□ 1.39
AP001258.1-201ENST00000501817 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
AP001258.1-201ENST00000501817 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.36
AP001258.1-201ENST00000501817 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.36
AP001258.1-201ENST00000501817 NCAPD3P42695 1498 aa23.52■■□□□ 1.36
AP001258.1-201ENST00000501817 PLPPR3Q6T4P5 718 aa23.51■■□□□ 1.35
AP001258.1-201ENST00000501817 HMGXB3Q12766 1538 aa23.5■■□□□ 1.35
AP001258.1-201ENST00000501817 CCDC88BA6NC98 1476 aa23.49■■□□□ 1.35
AP001258.1-201ENST00000501817 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
AP001258.1-201ENST00000501817 FOXD1Q16676 465 aa23.09■■□□□ 1.29
AP001258.1-201ENST00000501817 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
AP001258.1-201ENST00000501817 CFTRP13569 1480 aa22.98■■□□□ 1.27
AP001258.1-201ENST00000501817 PRDM2Q13029 1718 aa22.93■■□□□ 1.26
AP001258.1-201ENST00000501817 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
AP001258.1-201ENST00000501817 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
AP001258.1-201ENST00000501817 NESP48681 1621 aa22.85■■□□□ 1.25
AP001258.1-201ENST00000501817 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
AP001258.1-201ENST00000501817 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
AP001258.1-201ENST00000501817 LAMC3Q9Y6N6 1575 aa22.77■■□□□ 1.23
AP001258.1-201ENST00000501817 FANCD2Q9BXW9 1451 aa22.69■■□□□ 1.22
AP001258.1-201ENST00000501817 TOP2BQ02880 1626 aa22.66■■□□□ 1.22
AP001258.1-201ENST00000501817 CUX1P39880 1505 aa22.65■■□□□ 1.22
AP001258.1-201ENST00000501817 BIVM-ERCC5R4GMW8 1640 aa22.65■■□□□ 1.22
AP001258.1-201ENST00000501817 KIF21AQ7Z4S6 1674 aa22.6■■□□□ 1.21
AP001258.1-201ENST00000501817 FAM9AQ8IZU1 332 aaPredicted RBP22.55■■□□□ 1.2
AP001258.1-201ENST00000501817 PDS5BQ9NTI5 1447 aa22.54■■□□□ 1.2
AP001258.1-201ENST00000501817 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
AP001258.1-201ENST00000501817 SOGA1O94964 1423 aa22.52■■□□□ 1.19
AP001258.1-201ENST00000501817 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
AP001258.1-201ENST00000501817 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.19
AP001258.1-201ENST00000501817 URB2Q14146 1524 aaKnown RBP22.44■■□□□ 1.18
AP001258.1-201ENST00000501817 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
AP001258.1-201ENST00000501817 LOC105371045A0A1W2PR82 267 aa22.43■■□□□ 1.18
AP001258.1-201ENST00000501817 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
AP001258.1-201ENST00000501817 PPP6R1Q9UPN7 881 aa22.35■■□□□ 1.17
AP001258.1-201ENST00000501817 ADRA2BP18089 450 aa22.34■■□□□ 1.17
AP001258.1-201ENST00000501817 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
AP001258.1-201ENST00000501817 EEA1Q15075 1411 aa22.32■■□□□ 1.16
AP001258.1-201ENST00000501817 MRC2Q9UBG0 1479 aa22.3■■□□□ 1.16
AP001258.1-201ENST00000501817 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
AP001258.1-201ENST00000501817 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
AP001258.1-201ENST00000501817 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
AP001258.1-201ENST00000501817 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
AP001258.1-201ENST00000501817 THOC2Q8NI27 1593 aaKnown RBP22.23■■□□□ 1.15
AP001258.1-201ENST00000501817 CUX2O14529 1486 aa22.22■■□□□ 1.15
AP001258.1-201ENST00000501817 WDR62O43379 1518 aa22.22■■□□□ 1.15
AP001258.1-201ENST00000501817 WDR97A6NE52 1622 aa22.2■■□□□ 1.14
AP001258.1-201ENST00000501817 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
AP001258.1-201ENST00000501817 ABCA10Q8WWZ4 1543 aa22.18■■□□□ 1.14
AP001258.1-201ENST00000501817 TARBP1Q13395 1621 aaKnown RBP22.15■■□□□ 1.14
AP001258.1-201ENST00000501817 KIF21BO75037 1637 aa22.13■■□□□ 1.13
AP001258.1-201ENST00000501817 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
AP001258.1-201ENST00000501817 GOLGA3Q08378 1498 aa22.06■■□□□ 1.12
AP001258.1-201ENST00000501817 RAPGEF2Q9Y4G8 1499 aa22.06■■□□□ 1.12
AP001258.1-201ENST00000501817 PRXQ9BXM0 1461 aa22.05■■□□□ 1.12
AP001258.1-201ENST00000501817 IGF1RP08069 1367 aa22.04■■□□□ 1.12
AP001258.1-201ENST00000501817 TDRD9Q8NDG6 1382 aaKnown RBP22.04■■□□□ 1.12
AP001258.1-201ENST00000501817 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
AP001258.1-201ENST00000501817 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
AP001258.1-201ENST00000501817 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
AP001258.1-201ENST00000501817 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
AP001258.1-201ENST00000501817 UBTFP17480 764 aaKnown RBP21.96■■□□□ 1.11
AP001258.1-201ENST00000501817 TNIKQ9UKE5 1360 aa21.95■■□□□ 1.1
AP001258.1-201ENST00000501817 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.1
AP001258.1-201ENST00000501817 PBRM1Q86U86 1689 aa21.94■■□□□ 1.1
AP001258.1-201ENST00000501817 CARMIL1Q5VZK9 1371 aa21.92■■□□□ 1.1
AP001258.1-201ENST00000501817 CUL7Q14999 1698 aa21.9■■□□□ 1.1
AP001258.1-201ENST00000501817 EIF4G3O43432 1585 aaKnown RBP21.89■■□□□ 1.09
AP001258.1-201ENST00000501817 CEP162Q5TB80 1403 aa21.87■■□□□ 1.09
AP001258.1-201ENST00000501817 PIAS4Q8N2W9 510 aaPredicted RBP21.83■■□□□ 1.08
AP001258.1-201ENST00000501817 GRIN2BQ13224 1484 aa21.8■■□□□ 1.08
AP001258.1-201ENST00000501817 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 223.9 ms