RNA–Protein interactions for RNA: ENST00000506939.6

PCDHA10-202, Transcript of protocadherin alpha 10, humanhuman

TSL 1 (best) BASIC

Gene PCDHA10, Length 3,788 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA10-202ENST00000506939 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
PCDHA10-202ENST00000506939 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.24
PCDHA10-202ENST00000506939 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
PCDHA10-202ENST00000506939 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
PCDHA10-202ENST00000506939 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
PCDHA10-202ENST00000506939 ZCCHC6Q5VYS8 1495 aaKnown RBP21.29■■□□□ 1
PCDHA10-202ENST00000506939 PCGF6Q9BYE7 350 aa21.28■■□□□ 1
PCDHA10-202ENST00000506939 EHMT2Q96KQ7 1210 aa21.16■□□□□ 0.98
PCDHA10-202ENST00000506939 LOC105371045A0A1W2PR82 267 aa21.08■□□□□ 0.96
PCDHA10-202ENST00000506939 CCDC180Q9P1Z9 1646 aa20.99■□□□□ 0.95
PCDHA10-202ENST00000506939 FAM9AQ8IZU1 332 aaPredicted RBP20.99■□□□□ 0.95
PCDHA10-202ENST00000506939 MYO15BQ96JP2 1530 aa20.98■□□□□ 0.95
PCDHA10-202ENST00000506939 HRCP23327 699 aa20.9■□□□□ 0.94
PCDHA10-202ENST00000506939 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
PCDHA10-202ENST00000506939 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
PCDHA10-202ENST00000506939 TRIM26Q12899 539 aaPredicted RBP20.48■□□□□ 0.87
PCDHA10-202ENST00000506939 ABCC9O60706 1549 aa20.45■□□□□ 0.86
PCDHA10-202ENST00000506939 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
PCDHA10-202ENST00000506939 TTBK1Q5TCY1 1321 aaPredicted RBP20.44■□□□□ 0.86
PCDHA10-202ENST00000506939 DCAF1Q9Y4B6 1507 aa20.31■□□□□ 0.84
PCDHA10-202ENST00000506939 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
PCDHA10-202ENST00000506939 ZEB1P37275 1124 aaPredicted RBP20.07■□□□□ 0.8
PCDHA10-202ENST00000506939 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
PCDHA10-202ENST00000506939 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.79
PCDHA10-202ENST00000506939 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
PCDHA10-202ENST00000506939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
PCDHA10-202ENST00000506939 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
PCDHA10-202ENST00000506939 UBTFP17480 764 aaKnown RBP19.96■□□□□ 0.79
PCDHA10-202ENST00000506939 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
PCDHA10-202ENST00000506939 MROH2BQ7Z745 1585 aa19.82■□□□□ 0.76
PCDHA10-202ENST00000506939 NACADO15069 1562 aa19.7■□□□□ 0.74
PCDHA10-202ENST00000506939 WIZO95785 1651 aa19.67■□□□□ 0.74
PCDHA10-202ENST00000506939 APLP2Q06481 763 aa19.63■□□□□ 0.73
PCDHA10-202ENST00000506939 HNRNPUL2Q1KMD3 747 aaKnown RBP19.61■□□□□ 0.73
PCDHA10-202ENST00000506939 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
PCDHA10-202ENST00000506939 YTHDC1Q96MU7 727 aaKnown RBP19.51■□□□□ 0.71
PCDHA10-202ENST00000506939 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
PCDHA10-202ENST00000506939 DIEXFQ68CQ4 756 aaKnown RBP19.48■□□□□ 0.71
PCDHA10-202ENST00000506939 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
PCDHA10-202ENST00000506939 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
PCDHA10-202ENST00000506939 SOGA1O94964 1423 aa19.45■□□□□ 0.7
PCDHA10-202ENST00000506939 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
PCDHA10-202ENST00000506939 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
PCDHA10-202ENST00000506939 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
PCDHA10-202ENST00000506939 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
PCDHA10-202ENST00000506939 ITGAEP38570 1179 aa19.27■□□□□ 0.68
PCDHA10-202ENST00000506939 NEUROD1Q13562 356 aa19.26■□□□□ 0.67
PCDHA10-202ENST00000506939 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
PCDHA10-202ENST00000506939 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
PCDHA10-202ENST00000506939 TOP2AP11388 1531 aaKnown RBP19.22■□□□□ 0.67
PCDHA10-202ENST00000506939 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
PCDHA10-202ENST00000506939 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
PCDHA10-202ENST00000506939 ATP1B4Q9UN42 357 aaPredicted RBP19.2■□□□□ 0.66
PCDHA10-202ENST00000506939 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
PCDHA10-202ENST00000506939 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
PCDHA10-202ENST00000506939 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
PCDHA10-202ENST00000506939 GOLGA3Q08378 1498 aa19.12■□□□□ 0.65
PCDHA10-202ENST00000506939 CLIP1P30622 1438 aa19.1■□□□□ 0.65
PCDHA10-202ENST00000506939 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
PCDHA10-202ENST00000506939 EEA1Q15075 1411 aa19.07■□□□□ 0.64
PCDHA10-202ENST00000506939 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
PCDHA10-202ENST00000506939 MIER1Q8N108 512 aa18.98■□□□□ 0.63
PCDHA10-202ENST00000506939 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
PCDHA10-202ENST00000506939 P3H3Q8IVL6 736 aa18.92■□□□□ 0.62
PCDHA10-202ENST00000506939 RAPGEF2Q9Y4G8 1499 aa18.88■□□□□ 0.61
PCDHA10-202ENST00000506939 EIF4G1Q04637 1599 aaKnown RBP18.87■□□□□ 0.61
PCDHA10-202ENST00000506939 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
PCDHA10-202ENST00000506939 FAM50AQ14320 339 aaKnown RBP18.84■□□□□ 0.61
PCDHA10-202ENST00000506939 KANK4Q5T7N3 995 aaPredicted RBP18.83■□□□□ 0.61
PCDHA10-202ENST00000506939 VPS8Q8N3P4 1428 aa18.82■□□□□ 0.6
PCDHA10-202ENST00000506939 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
PCDHA10-202ENST00000506939 UNC13AQ9UPW8 1703 aa18.78■□□□□ 0.6
PCDHA10-202ENST00000506939 BICRAQ9NZM4 1560 aa18.74■□□□□ 0.59
PCDHA10-202ENST00000506939 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
PCDHA10-202ENST00000506939 HIRIP3Q9BW71 556 aaPredicted RBP18.61■□□□□ 0.57
PCDHA10-202ENST00000506939 KIF21BO75037 1637 aa18.59■□□□□ 0.57
PCDHA10-202ENST00000506939 BCANQ96GW7 911 aa18.55■□□□□ 0.56
PCDHA10-202ENST00000506939 CUX2O14529 1486 aa18.53■□□□□ 0.56
PCDHA10-202ENST00000506939 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
PCDHA10-202ENST00000506939 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
PCDHA10-202ENST00000506939 SIN3AQ96ST3 1273 aa18.52■□□□□ 0.56
PCDHA10-202ENST00000506939 DHX57Q6P158 1386 aaKnown RBP18.52■□□□□ 0.55
PCDHA10-202ENST00000506939 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
PCDHA10-202ENST00000506939 ARAP1Q96P48 1450 aa18.47■□□□□ 0.55
PCDHA10-202ENST00000506939 CARMIL1Q5VZK9 1371 aa18.45■□□□□ 0.54
PCDHA10-202ENST00000506939 PEG3Q9GZU2 1588 aa18.44■□□□□ 0.54
PCDHA10-202ENST00000506939 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
PCDHA10-202ENST00000506939 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
PCDHA10-202ENST00000506939 PRXQ9BXM0 1461 aa18.4■□□□□ 0.54
PCDHA10-202ENST00000506939 CNGB1Q14028 1251 aaPredicted RBP18.39■□□□□ 0.54
PCDHA10-202ENST00000506939 RAB3GAP2Q9H2M9 1393 aa18.39■□□□□ 0.54
PCDHA10-202ENST00000506939 CLSPNQ9HAW4 1339 aa18.39■□□□□ 0.53
PCDHA10-202ENST00000506939 CUX1P39880 1505 aa18.39■□□□□ 0.53
PCDHA10-202ENST00000506939 TRIM52Q96A61 297 aa18.36■□□□□ 0.53
PCDHA10-202ENST00000506939 NEFLP07196 543 aa18.35■□□□□ 0.53
PCDHA10-202ENST00000506939 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
PCDHA10-202ENST00000506939 IGF1RP08069 1367 aa18.35■□□□□ 0.53
PCDHA10-202ENST00000506939 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
PCDHA10-202ENST00000506939 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
PCDHA10-202ENST00000506939 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms