Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.549e-7■■■□□ 17.7
PABPN1Q86U42 GRK2-202ENST00000416281 4493 ntTSL 221.44■■□□□ 1.029e-7■■■□□ 17.7
PABPN1Q86U42 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.873e-6■■■□□ 17.7
PABPN1Q86U42 MBD3-209ENST00000592012 2379 ntTSL 532.56■■■□□ 2.83e-6■■■□□ 17.7
PABPN1Q86U42 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC29.92■■■□□ 2.383e-6■■■□□ 17.7
PABPN1Q86U42 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC27.65■■■□□ 2.023e-6■■■□□ 17.7
PABPN1Q86U42 MVD-209ENST00000565149 2352 ntTSL 1 (best)29.27■■■□□ 2.282e-9■■■□□ 17.6
PABPN1Q86U42 LUC7L-209ENST00000429378 721 ntTSL 337.28■■■■□ 3.561e-7■■■□□ 17.6
PABPN1Q86U42 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.261e-7■■■□□ 17.6
PABPN1Q86U42 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC33.15■■■□□ 2.91e-7■■■□□ 17.6
PABPN1Q86U42 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC31.57■■■□□ 2.641e-7■■■□□ 17.6
PABPN1Q86U42 LUC7L-207ENST00000426094 2737 ntTSL 1 (best)30.89■■■□□ 2.541e-7■■■□□ 17.6
PABPN1Q86U42 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC30.87■■■□□ 2.531e-7■■■□□ 17.6
PABPN1Q86U42 LUC7L-213ENST00000464711 2134 ntTSL 227.37■■□□□ 1.971e-7■■■□□ 17.6
PABPN1Q86U42 LUC7L-217ENST00000490762 2643 ntTSL 1 (best)23.51■■□□□ 1.351e-7■■■□□ 17.6
PABPN1Q86U42 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.43e-7■■■□□ 17.6
PABPN1Q86U42 RHOT2-222ENST00000569675 2559 ntTSL 229.19■■■□□ 2.263e-7■■■□□ 17.6
PABPN1Q86U42 SLC5A9-205ENST00000471020 1989 ntTSL 1 (best)27.41■■□□□ 1.981e-6■■■□□ 17.6
PABPN1Q86U42 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.851e-6■■■□□ 17.6
PABPN1Q86U42 SLC5A9-206ENST00000493837 3769 ntTSL 217.29■□□□□ 0.361e-6■■■□□ 17.6
PABPN1Q86U42 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.011e-6■■■□□ 17.6
PABPN1Q86U42 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.269e-7■■■□□ 17.5
PABPN1Q86U42 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC34.65■■■■□ 3.149e-7■■■□□ 17.5
PABPN1Q86U42 AP3D1-211ENST00000591650 1437 ntTSL 1 (best)33.02■■■□□ 2.882e-7■■■□□ 17.5
PABPN1Q86U42 RASSF4-208ENST00000472561 892 ntTSL 328.76■■■□□ 2.195e-6■■■□□ 17.5
PABPN1Q86U42 AP3D1-205ENST00000586370 911 ntTSL 214.93□□□□□ -0.022e-7■■■□□ 17.5
PABPN1Q86U42 CNDP2-226ENST00000584581 4523 ntTSL 215.46■□□□□ 0.063e-6■■■□□ 17.5
PABPN1Q86U42 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC43.99■■■■■ 4.634e-8■■■□□ 17.5
PABPN1Q86U42 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC37.28■■■■□ 3.564e-8■■■□□ 17.5
PABPN1Q86U42 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC36.86■■■■□ 3.494e-8■■■□□ 17.5
PABPN1Q86U42 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC33.26■■■□□ 2.914e-8■■■□□ 17.5
PABPN1Q86U42 BSCL2-213ENST00000463679 881 ntTSL 225.77■■□□□ 1.724e-8■■■□□ 17.5
PABPN1Q86U42 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.714e-8■■■□□ 17.5
PABPN1Q86U42 BSCL2-212ENST00000449636 545 ntTSL 325.08■■□□□ 1.614e-8■■■□□ 17.5
PABPN1Q86U42 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.574e-8■■■□□ 17.5
PABPN1Q86U42 BSCL2-202ENST00000301781 1712 ntTSL 523.36■■□□□ 1.334e-8■■■□□ 17.5
PABPN1Q86U42 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.614e-8■■■□□ 17.5
PABPN1Q86U42 BSCL2-216ENST00000470529 512 ntTSL 217.03■□□□□ 0.324e-8■■■□□ 17.5
PABPN1Q86U42 BSCL2-204ENST00000403098 326 ntTSL 58.64□□□□□ -1.034e-8■■■□□ 17.5
PABPN1Q86U42 COL18A1-201ENST00000342220 3386 ntTSL 222.51■■□□□ 1.191e-12■■■□□ 17.5
PABPN1Q86U42 RBM6-203ENST00000421682 684 ntTSL 2 BASIC10.79□□□□□ -0.685e-11■■■□□ 17.5
PABPN1Q86U42 DMPK-215ENST00000598272 1410 nt49.78■■■■■ 5.569e-9■■■□□ 17.5
PABPN1Q86U42 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.53e-7■■■□□ 17.5
PABPN1Q86U42 KIFC2-205ENST00000531425 1053 ntTSL 352.06■■■■■ 5.922e-6■■■□□ 17.5
PABPN1Q86U42 LINC01089-206ENST00000537157 479 ntTSL 246.05■■■■■ 4.962e-8■■■□□ 17.5
PABPN1Q86U42 LINC01089-201ENST00000428029 1024 ntTSL 237.85■■■■□ 3.652e-8■■■□□ 17.5
PABPN1Q86U42 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC42.09■■■■■ 4.331e-7■■■□□ 17.5
PABPN1Q86U42 COL9A3-213ENST00000489045 838 ntTSL 547.09■■■■■ 5.136e-9■■■□□ 17.5
PABPN1Q86U42 PTOV1-208ENST00000597730 327 ntTSL 232.03■■■□□ 2.728e-7■■■□□ 17.5
PABPN1Q86U42 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.74e-11■■■□□ 17.5
PABPN1Q86U42 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.124e-11■■■□□ 17.5
PABPN1Q86U42 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC42.67■■■■■ 4.426e-8■■■□□ 17.5
PABPN1Q86U42 TBCD-203ENST00000570679 689 ntTSL 219.6■□□□□ 0.732e-7■■■□□ 17.4
PABPN1Q86U42 SPG7-221ENST00000569720 909 ntTSL 227.26■■□□□ 1.955e-7■■■□□ 17.4
PABPN1Q86U42 ARHGEF1-216ENST00000598587 359 ntTSL 223.51■■□□□ 1.351e-6■■■□□ 17.4
PABPN1Q86U42 STAT2-207ENST00000556539 3278 ntTSL 1 (best)18.56■□□□□ 0.562e-6■■■□□ 17.4
PABPN1Q86U42 MYO15B-217ENST00000580414 903 ntTSL 325.48■■□□□ 1.674e-6■■■□□ 17.4
PABPN1Q86U42 MYO15B-208ENST00000578220 834 ntTSL 323.75■■□□□ 1.394e-6■■■□□ 17.4
PABPN1Q86U42 MYO15B-205ENST00000577948 816 ntTSL 323.68■■□□□ 1.384e-6■■■□□ 17.4
PABPN1Q86U42 MCM7-211ENST00000491245 648 ntTSL 1 (best)19.71■□□□□ 0.752e-6■■■□□ 17.4
PABPN1Q86U42 ASL-203ENST00000380839 1765 ntTSL 5 BASIC41.46■■■■■ 4.234e-8■■■□□ 17.4
PABPN1Q86U42 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.484e-8■■■□□ 17.4
PABPN1Q86U42 ASL-204ENST00000395331 1538 ntTSL 5 BASIC33.73■■■□□ 2.994e-8■■■□□ 17.4
PABPN1Q86U42 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.84e-8■■■□□ 17.4
PABPN1Q86U42 INTS11-236ENST00000528879 1524 ntTSL 531.02■■■□□ 2.566e-7■■■□□ 17.4
PABPN1Q86U42 SKIV2L-209ENST00000483553 1307 ntTSL 533.25■■■□□ 2.912e-6■■■□□ 17.4
PABPN1Q86U42 SKIV2L-207ENST00000471818 706 ntTSL 532■■■□□ 2.712e-6■■■□□ 17.4
PABPN1Q86U42 SKIV2L-213ENST00000491994 866 ntTSL 231.06■■■□□ 2.562e-6■■■□□ 17.4
PABPN1Q86U42 SKIV2L-206ENST00000470453 455 ntTSL 328.3■■■□□ 2.122e-6■■■□□ 17.4
PABPN1Q86U42 SKIV2L-204ENST00000465703 4507 ntTSL 1 (best)20.39■□□□□ 0.852e-6■■■□□ 17.4
PABPN1Q86U42 SKIV2L-208ENST00000474839 3378 ntTSL 219■□□□□ 0.632e-6■■■□□ 17.4
PABPN1Q86U42 SKIV2L-201ENST00000375394 3894 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.172e-6■■■□□ 17.4
PABPN1Q86U42 ARHGEF10L-201ENST00000167825 3018 ntTSL 222.33■■□□□ 1.174e-7■■■□□ 17.4
PABPN1Q86U42 ARHGEF10L-206ENST00000469726 4585 ntTSL 220.75■□□□□ 0.914e-7■■■□□ 17.4
PABPN1Q86U42 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC18.05■□□□□ 0.484e-7■■■□□ 17.4
PABPN1Q86U42 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC26.52■■□□□ 1.844e-11■■■□□ 17.3
PABPN1Q86U42 KLC4-207ENST00000463063 841 ntTSL 327.38■■□□□ 1.973e-8■■■□□ 17.3
PABPN1Q86U42 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.822e-9■■■□□ 17.3
PABPN1Q86U42 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC49.62■■■■■ 5.535e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC44.76■■■■■ 4.765e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC43.38■■■■■ 4.535e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC41.44■■■■■ 4.225e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC39.84■■■■□ 3.975e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC34.99■■■■□ 3.195e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.065e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.885e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC32.09■■■□□ 2.735e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-212ENST00000494815 2187 ntTSL 231.89■■■□□ 2.75e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC31.26■■■□□ 2.595e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-210ENST00000464987 2205 ntTSL 530.28■■■□□ 2.445e-10■■■□□ 17.3
PABPN1Q86U42 TSPAN4-211ENST00000468468 2777 ntTSL 225.5■■□□□ 1.675e-10■■■□□ 17.3
PABPN1Q86U42 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.456e-11■■■□□ 17.3
PABPN1Q86U42 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC21.16■□□□□ 0.986e-11■■■□□ 17.3
PABPN1Q86U42 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC20.1■□□□□ 0.816e-11■■■□□ 17.3
PABPN1Q86U42 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.766e-11■■■□□ 17.3
PABPN1Q86U42 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC19.54■□□□□ 0.726e-11■■■□□ 17.3
PABPN1Q86U42 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC19.32■□□□□ 0.686e-11■■■□□ 17.3
PABPN1Q86U42 ACIN1-206ENST00000473758 3540 ntTSL 1 (best)18.4■□□□□ 0.546e-11■■■□□ 17.3
PABPN1Q86U42 ACIN1-223ENST00000605057 4474 ntTSL 1 (best) BASIC16.8■□□□□ 0.286e-11■■■□□ 17.3
PABPN1Q86U42 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.916e-11■■■□□ 17.3
Retrieved 100 of 8,254 protein–RNA pairs in 326.2 ms