RNA–Protein interactions for RNA: ENST00000586370.5

AP3D1-205, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-205ENST00000586370 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
AP3D1-205ENST00000586370 ABCC9O60706 1549 aa15.91■□□□□ 0.14
AP3D1-205ENST00000586370 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
AP3D1-205ENST00000586370 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
AP3D1-205ENST00000586370 RB1CC1Q8TDY2 1594 aa15.01□□□□□ -0.01
AP3D1-205ENST00000586370 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
AP3D1-205ENST00000586370 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.022e-7■■■□□ 17.5
AP3D1-205ENST00000586370 NACADO15069 1562 aa14.89□□□□□ -0.03
AP3D1-205ENST00000586370 MYO15BQ96JP2 1530 aa14.62□□□□□ -0.07
AP3D1-205ENST00000586370 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
AP3D1-205ENST00000586370 BICRAQ9NZM4 1560 aa14.57□□□□□ -0.08
AP3D1-205ENST00000586370 UNC13AQ9UPW8 1703 aa14.57□□□□□ -0.08
AP3D1-205ENST00000586370 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.1
AP3D1-205ENST00000586370 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
AP3D1-205ENST00000586370 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
AP3D1-205ENST00000586370 SHROOM4Q9ULL8 1493 aa14.27□□□□□ -0.12
AP3D1-205ENST00000586370 CC2D2AQ9P2K1 1620 aa14.26□□□□□ -0.13
AP3D1-205ENST00000586370 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
AP3D1-205ENST00000586370 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
AP3D1-205ENST00000586370 ATAD2BQ9ULI0 1458 aa13.78□□□□□ -0.2
AP3D1-205ENST00000586370 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
AP3D1-205ENST00000586370 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
AP3D1-205ENST00000586370 SMARCA4P51532 1647 aa13.7□□□□□ -0.22
AP3D1-205ENST00000586370 SMARCA2P51531 1590 aa13.68□□□□□ -0.22
AP3D1-205ENST00000586370 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
AP3D1-205ENST00000586370 NESP48681 1621 aa13.65□□□□□ -0.22
AP3D1-205ENST00000586370 BAZ1BQ9UIG0 1483 aaKnown RBP13.65□□□□□ -0.22
AP3D1-205ENST00000586370 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
AP3D1-205ENST00000586370 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
AP3D1-205ENST00000586370 CUX2O14529 1486 aa13.58□□□□□ -0.24
AP3D1-205ENST00000586370 PEG3Q9GZU2 1588 aa13.51□□□□□ -0.25
AP3D1-205ENST00000586370 PDS5BQ9NTI5 1447 aa13.45□□□□□ -0.26
AP3D1-205ENST00000586370 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
AP3D1-205ENST00000586370 LAMC3Q9Y6N6 1575 aa13.43□□□□□ -0.26
AP3D1-205ENST00000586370 WIZO95785 1651 aa13.43□□□□□ -0.26
AP3D1-205ENST00000586370 RSF1Q96T23 1441 aaPredicted RBP13.37□□□□□ -0.27
AP3D1-205ENST00000586370 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
AP3D1-205ENST00000586370 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
AP3D1-205ENST00000586370 MRC2Q9UBG0 1479 aa13.3□□□□□ -0.28
AP3D1-205ENST00000586370 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
AP3D1-205ENST00000586370 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
AP3D1-205ENST00000586370 CFTRP13569 1480 aa13.23□□□□□ -0.29
AP3D1-205ENST00000586370 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
AP3D1-205ENST00000586370 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
AP3D1-205ENST00000586370 WDR62O43379 1518 aa13.21□□□□□ -0.29
AP3D1-205ENST00000586370 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
AP3D1-205ENST00000586370 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
AP3D1-205ENST00000586370 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
AP3D1-205ENST00000586370 ZNF608Q9ULD9 1512 aaPredicted RBP13.02□□□□□ -0.33
AP3D1-205ENST00000586370 TOPBP1Q92547 1522 aa12.99□□□□□ -0.33
AP3D1-205ENST00000586370 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
AP3D1-205ENST00000586370 SUPT5HO00267 1087 aaKnown RBP12.99□□□□□ -0.33
AP3D1-205ENST00000586370 FBLN2P98095 1184 aa12.98□□□□□ -0.33
AP3D1-205ENST00000586370 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■■■□ 25.4
AP3D1-205ENST00000586370 ABCC8Q09428 1581 aa12.94□□□□□ -0.34
AP3D1-205ENST00000586370 TDRD9Q8NDG6 1382 aaKnown RBP12.9□□□□□ -0.34
AP3D1-205ENST00000586370 PRDM2Q13029 1718 aa12.9□□□□□ -0.34
AP3D1-205ENST00000586370 RAD54L2Q9Y4B4 1467 aa12.9□□□□□ -0.34
AP3D1-205ENST00000586370 DNMBPQ6XZF7 1577 aa12.9□□□□□ -0.35
AP3D1-205ENST00000586370 SOGA1O94964 1423 aa12.88□□□□□ -0.35
AP3D1-205ENST00000586370 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
AP3D1-205ENST00000586370 POLA1P09884 1462 aaPredicted RBP12.86□□□□□ -0.35
AP3D1-205ENST00000586370 EIF4G3O43432 1585 aaKnown RBP12.84□□□□□ -0.35
AP3D1-205ENST00000586370 TARBP1Q13395 1621 aaKnown RBP12.82□□□□□ -0.36
AP3D1-205ENST00000586370 CHMP7Q8WUX9 453 aaPredicted RBP12.82□□□□□ -0.36
AP3D1-205ENST00000586370 RIMBP3CA6NJZ7 1639 aa12.81□□□□□ -0.36
AP3D1-205ENST00000586370 RIMBP3BA6NNM3 1639 aa12.81□□□□□ -0.36
AP3D1-205ENST00000586370 RIMBP3Q9UFD9 1639 aa12.81□□□□□ -0.36
AP3D1-205ENST00000586370 FGD5Q6ZNL6 1462 aa12.81□□□□□ -0.36
AP3D1-205ENST00000586370 ARHGEF11O15085 1522 aa12.8□□□□□ -0.36
AP3D1-205ENST00000586370 CUX1P39880 1505 aa12.78□□□□□ -0.36
AP3D1-205ENST00000586370 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
AP3D1-205ENST00000586370 SNAPC4Q5SXM2 1469 aa12.75□□□□□ -0.37
AP3D1-205ENST00000586370 CHD1O14646 1710 aa12.73□□□□□ -0.37
AP3D1-205ENST00000586370 GRIN2BQ13224 1484 aa12.71□□□□□ -0.38
AP3D1-205ENST00000586370 ARAP1Q96P48 1450 aa12.69□□□□□ -0.38
AP3D1-205ENST00000586370 GAPVD1Q14C86 1478 aa12.67□□□□□ -0.38
AP3D1-205ENST00000586370 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
AP3D1-205ENST00000586370 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
AP3D1-205ENST00000586370 WRNQ14191 1432 aaPredicted RBP eCLIP12.63□□□□□ -0.39
AP3D1-205ENST00000586370 ABCA10Q8WWZ4 1543 aa12.62□□□□□ -0.39
AP3D1-205ENST00000586370 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
AP3D1-205ENST00000586370 WDR97A6NE52 1622 aa12.6□□□□□ -0.39
AP3D1-205ENST00000586370 CLASP1Q7Z460 1538 aa12.6□□□□□ -0.39
AP3D1-205ENST00000586370 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
AP3D1-205ENST00000586370 ABCA5Q8WWZ7 1642 aa12.54□□□□□ -0.4
AP3D1-205ENST00000586370 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
AP3D1-205ENST00000586370 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
AP3D1-205ENST00000586370 FHAD1B1AJZ9 1412 aa12.51□□□□□ -0.41
AP3D1-205ENST00000586370 JPH4Q96JJ6 628 aa12.49□□□□□ -0.41
AP3D1-205ENST00000586370 ERCC6L2Q5T890 1561 aa12.48□□□□□ -0.41
AP3D1-205ENST00000586370 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
AP3D1-205ENST00000586370 NUP160Q12769 1436 aa12.47□□□□□ -0.41
AP3D1-205ENST00000586370 ADAMTS12P58397 1594 aa12.47□□□□□ -0.41
AP3D1-205ENST00000586370 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
AP3D1-205ENST00000586370 PRG4Q92954 1404 aaPredicted RBP12.44□□□□□ -0.42
AP3D1-205ENST00000586370 TTBK1Q5TCY1 1321 aaPredicted RBP12.43□□□□□ -0.42
AP3D1-205ENST00000586370 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
AP3D1-205ENST00000586370 IGF1RP08069 1367 aa12.4□□□□□ -0.42
AP3D1-205ENST00000586370 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms