Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.9□□□□□ -0.51e-48■■■■□ 24
NCBP2P52298 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.751e-48■■■■□ 24
NCBP2P52298 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.576e-7■■■■□ 24
NCBP2P52298 CHST15-203ENST00000462406 826 ntTSL 26.51□□□□□ -1.376e-7■■■■□ 24
NCBP2P52298 SNHG20-205ENST00000568363 786 ntTSL 1 (best)12□□□□□ -0.494e-8■■■■□ 23.9
NCBP2P52298 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC11.18□□□□□ -0.624e-8■■■■□ 23.9
NCBP2P52298 SEC14L1-208ENST00000564414 528 ntTSL 1 (best)5.47□□□□□ -1.534e-8■■■■□ 23.9
NCBP2P52298 SEC14L1-210ENST00000568056 424 ntTSL 1 (best)3.36□□□□□ -1.874e-8■■■■□ 23.9
NCBP2P52298 STAT6-207ENST00000553397 553 ntTSL 413.41□□□□□ -0.265e-12■■■■□ 23.9
NCBP2P52298 STAT6-221ENST00000556259 548 ntTSL 37□□□□□ -1.295e-12■■■■□ 23.9
NCBP2P52298 DENND4A-208ENST00000568515 2655 ntTSL 220.22■□□□□ 0.831e-6■■■■□ 23.9
NCBP2P52298 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.61e-6■■■■□ 23.9
NCBP2P52298 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.45□□□□□ -2.021e-6■■■■□ 23.9
NCBP2P52298 SLC16A3-210ENST00000580189 872 ntTSL 518.03■□□□□ 0.486e-15■■■■□ 23.9
NCBP2P52298 KIAA0232-205ENST00000508423 700 ntTSL 219.92■□□□□ 0.785e-8■■■■□ 23.9
NCBP2P52298 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.79■□□□□ 0.761e-6■■■■□ 23.9
NCBP2P52298 CHEK1-215ENST00000533778 561 ntTSL 318.41■□□□□ 0.545e-13■■■■□ 23.9
NCBP2P52298 EIPR1-203ENST00000406835 738 ntTSL 517.51■□□□□ 0.391e-6■■■■□ 23.9
NCBP2P52298 EIPR1-204ENST00000435721 672 ntTSL 317.51■□□□□ 0.391e-6■■■■□ 23.9
NCBP2P52298 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.351e-6■■■■□ 23.9
NCBP2P52298 EIPR1-205ENST00000441271 647 ntTSL 515.87■□□□□ 0.131e-6■■■■□ 23.9
NCBP2P52298 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.62■□□□□ 0.091e-6■■■■□ 23.9
NCBP2P52298 EIPR1-212ENST00000478754 2932 ntTSL 515.52■□□□□ 0.081e-6■■■■□ 23.9
NCBP2P52298 EIPR1-207ENST00000444776 594 ntTSL 415.24■□□□□ 0.031e-6■■■■□ 23.9
NCBP2P52298 CHEK1-201ENST00000278916 1712 ntTSL 5 BASIC10.97□□□□□ -0.655e-13■■■■□ 23.9
NCBP2P52298 EIPR1-208ENST00000455162 847 ntTSL 59.89□□□□□ -0.831e-6■■■■□ 23.9
NCBP2P52298 CHEK1-206ENST00000524737 1799 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.865e-13■■■■□ 23.9
NCBP2P52298 CHEK1-212ENST00000531607 462 ntTSL 39.39□□□□□ -0.915e-13■■■■□ 23.9
NCBP2P52298 EIPR1-210ENST00000463662 757 ntTSL 38.4□□□□□ -1.061e-6■■■■□ 23.9
NCBP2P52298 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.385e-8■■■■□ 23.9
NCBP2P52298 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.425e-8■■■■□ 23.9
NCBP2P52298 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.615e-13■■■■□ 23.9
NCBP2P52298 KIAA0232-204ENST00000503278 563 ntTSL 43.34□□□□□ -1.875e-8■■■■□ 23.9
NCBP2P52298 RPS18-236ENST00000490191 996 ntTSL 214.06□□□□□ -0.167e-29■■■■□ 23.8
NCBP2P52298 RPS18-234ENST00000476222 685 ntTSL 1 (best)10.65□□□□□ -0.77e-29■■■■□ 23.8
NCBP2P52298 RPS18-233ENST00000474973 589 ntTSL 2 BASIC10.65□□□□□ -0.77e-29■■■■□ 23.8
NCBP2P52298 RPS18-230ENST00000439602 613 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.77e-29■■■■□ 23.8
NCBP2P52298 RPS18-237ENST00000496813 642 ntTSL 29.41□□□□□ -0.97e-29■■■■□ 23.8
NCBP2P52298 RPS18-232ENST00000474626 639 ntTSL 39.41□□□□□ -0.97e-29■■■■□ 23.8
NCBP2P52298 SRSF6-202ENST00000483871 1680 ntTSL 213.21□□□□□ -0.38e-8■■■■□ 23.8
NCBP2P52298 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.028e-8■■■■□ 23.8
NCBP2P52298 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.152e-6■■■■□ 23.8
NCBP2P52298 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.63■□□□□ 0.092e-6■■■■□ 23.8
NCBP2P52298 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.372e-6■■■■□ 23.8
NCBP2P52298 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.392e-6■■■■□ 23.8
NCBP2P52298 TPCN2-204ENST00000535009 2175 ntTSL 221.14■□□□□ 0.984e-7■■■■□ 23.8
NCBP2P52298 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.2■□□□□ 0.664e-7■■■■□ 23.8
NCBP2P52298 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.04■□□□□ 0.644e-7■■■■□ 23.8
NCBP2P52298 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.7■□□□□ 0.584e-7■■■■□ 23.8
NCBP2P52298 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.444e-7■■■■□ 23.8
NCBP2P52298 TPCN2-206ENST00000635811 3824 ntTSL 513.29□□□□□ -0.284e-7■■■■□ 23.8
NCBP2P52298 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.756e-10■■■■□ 23.8
NCBP2P52298 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.83□□□□□ -0.21e-6■■■■□ 23.8
NCBP2P52298 USP3-205ENST00000557884 958 ntTSL 313.32□□□□□ -0.281e-6■■■■□ 23.8
NCBP2P52298 USP3-221ENST00000561442 542 ntTSL 513.32□□□□□ -0.281e-6■■■■□ 23.8
NCBP2P52298 USP3-202ENST00000380324 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.591e-6■■■■□ 23.8
NCBP2P52298 USP3-206ENST00000558157 2439 ntTSL 1 (best)9.84□□□□□ -0.831e-6■■■■□ 23.8
NCBP2P52298 USP3-219ENST00000561326 543 ntTSL 49.72□□□□□ -0.851e-6■■■■□ 23.8
NCBP2P52298 USP3-216ENST00000559873 584 ntTSL 59.41□□□□□ -0.91e-6■■■■□ 23.8
NCBP2P52298 USP3-217ENST00000560070 545 ntTSL 47.94□□□□□ -1.141e-6■■■■□ 23.8
NCBP2P52298 PLEC-213ENST00000528025 2115 ntTSL 518.23■□□□□ 0.511e-6■■■■□ 23.7
NCBP2P52298 PLEC-214ENST00000528131 564 ntTSL 316.97■□□□□ 0.311e-6■■■■□ 23.7
NCBP2P52298 PLEC-215ENST00000532346 316 ntTSL 313.81□□□□□ -0.21e-6■■■■□ 23.7
NCBP2P52298 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.531e-6■■■■□ 23.7
NCBP2P52298 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.621e-6■■■■□ 23.7
NCBP2P52298 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.71e-6■■■■□ 23.7
NCBP2P52298 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC10.63□□□□□ -0.711e-6■■■■□ 23.7
NCBP2P52298 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.27□□□□□ -1.736e-19■■■■□ 23.7
NCBP2P52298 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC11.74□□□□□ -0.532e-6■■■■□ 23.7
NCBP2P52298 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.3■■□□□ 1.82e-7■■■■□ 23.6
NCBP2P52298 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.572e-7■■■■□ 23.6
NCBP2P52298 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.512e-7■■■■□ 23.6
NCBP2P52298 PQLC1-206ENST00000474967 2319 ntTSL 518.74■□□□□ 0.592e-7■■■■□ 23.6
NCBP2P52298 PQLC1-201ENST00000351365 2414 ntTSL 217.38■□□□□ 0.372e-7■■■■□ 23.6
NCBP2P52298 PQLC1-204ENST00000466449 2887 ntTSL 216.11■□□□□ 0.172e-7■■■■□ 23.6
NCBP2P52298 PQLC1-205ENST00000469369 593 ntTSL 412.3□□□□□ -0.442e-7■■■■□ 23.6
NCBP2P52298 PQLC1-209ENST00000589000 558 ntTSL 410.34□□□□□ -0.752e-7■■■■□ 23.6
NCBP2P52298 UBAP2L-209ENST00000437652 911 ntTSL 323.73■■□□□ 1.397e-10■■■■□ 23.6
NCBP2P52298 UBAP2L-205ENST00000412596 980 ntTSL 523.21■■□□□ 1.317e-10■■■■□ 23.6
NCBP2P52298 UBAP2L-210ENST00000441890 678 ntTSL 215.69■□□□□ 0.17e-10■■■■□ 23.6
NCBP2P52298 UBAP2L-204ENST00000368504 1120 ntTSL 512.42□□□□□ -0.427e-10■■■■□ 23.6
NCBP2P52298 UBAP2L-207ENST00000428931 3988 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.777e-10■■■■□ 23.6
NCBP2P52298 UBAP2L-201ENST00000271877 3997 ntTSL 5 BASIC9.36□□□□□ -0.917e-10■■■■□ 23.6
NCBP2P52298 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.22□□□□□ -1.097e-10■■■■□ 23.6
NCBP2P52298 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC8.16□□□□□ -1.17e-10■■■■□ 23.6
NCBP2P52298 RPL10A-204ENST00000478340 962 ntTSL 216.53■□□□□ 0.245e-22■■■■□ 23.6
NCBP2P52298 RPL10A-205ENST00000490335 632 ntTSL 214.83□□□□□ -0.045e-22■■■■□ 23.6
NCBP2P52298 RPL10A-203ENST00000467020 1069 ntTSL 313.87□□□□□ -0.195e-22■■■■□ 23.6
NCBP2P52298 RPL10A-202ENST00000464112 1063 ntTSL 1 (best)11.75□□□□□ -0.535e-22■■■■□ 23.6
NCBP2P52298 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.685e-22■■■■□ 23.6
NCBP2P52298 KDM4B-205ENST00000588337 504 ntTSL 524.54■■□□□ 1.528e-7■■■■□ 23.5
NCBP2P52298 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.81■□□□□ 0.928e-9■■■■□ 23.5
NCBP2P52298 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)16.3■□□□□ 0.28e-9■■■■□ 23.5
NCBP2P52298 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.34□□□□□ -1.242e-11■■■■□ 23.5
NCBP2P52298 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.91■□□□□ 0.145e-12■■■■□ 23.5
NCBP2P52298 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.015e-12■■■■□ 23.5
NCBP2P52298 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.472e-16■■■■□ 23.5
NCBP2P52298 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.113e-6■■■■□ 23.5
NCBP2P52298 ACADVL-226ENST00000581562 571 ntTSL 321.05■□□□□ 0.964e-10■■■■□ 23.5
NCBP2P52298 ACADVL-233ENST00000583312 799 ntTSL 320.9■□□□□ 0.944e-10■■■■□ 23.5
Retrieved 100 of 18,329 protein–RNA pairs in 129.8 ms