RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 NISCHQ9Y2I1 1504 aa47.51■■■■■ 5.2
CHEK1-215ENST00000533778 CCDC180Q9P1Z9 1646 aa42.06■■■■■ 4.32
CHEK1-215ENST00000533778 ABCC9O60706 1549 aa41■■■■■ 4.15
CHEK1-215ENST00000533778 DCAF8L2P0C7V8 631 aa39.72■■■■□ 3.95
CHEK1-215ENST00000533778 ZCCHC6Q5VYS8 1495 aaKnown RBP39.6■■■■□ 3.93
CHEK1-215ENST00000533778 NACADO15069 1562 aa39.59■■■■□ 3.93
CHEK1-215ENST00000533778 RB1CC1Q8TDY2 1594 aa39.55■■■■□ 3.92
CHEK1-215ENST00000533778 MYO15BQ96JP2 1530 aa39.45■■■■□ 3.91
CHEK1-215ENST00000533778 DCAF1Q9Y4B6 1507 aa39.35■■■■□ 3.89
CHEK1-215ENST00000533778 UNC13AQ9UPW8 1703 aa38.43■■■■□ 3.74
CHEK1-215ENST00000533778 PABPN1Q86U42 306 aaKnown RBP eCLIP38.41■■■■□ 3.74
CHEK1-215ENST00000533778 SCRIBQ14160 1630 aa38.4■■■■□ 3.74
CHEK1-215ENST00000533778 BICRAQ9NZM4 1560 aa38.25■■■■□ 3.71
CHEK1-215ENST00000533778 SHROOM4Q9ULL8 1493 aa38.03■■■■□ 3.68
CHEK1-215ENST00000533778 DNAJC5BQ9UF47 199 aa37.43■■■■□ 3.58
CHEK1-215ENST00000533778 EIF4G1Q04637 1599 aaKnown RBP37.29■■■■□ 3.56
CHEK1-215ENST00000533778 CC2D2AQ9P2K1 1620 aa37.06■■■■□ 3.52
CHEK1-215ENST00000533778 CECR2Q9BXF3 1484 aa36.95■■■■□ 3.51
CHEK1-215ENST00000533778 BAZ1AQ9NRL2 1556 aaPredicted RBP36.83■■■■□ 3.49
CHEK1-215ENST00000533778 SMARCA4P51532 1647 aa36.75■■■■□ 3.47
CHEK1-215ENST00000533778 MROH2BQ7Z745 1585 aa36.57■■■■□ 3.45
CHEK1-215ENST00000533778 ATAD2BQ9ULI0 1458 aa36.57■■■■□ 3.45
CHEK1-215ENST00000533778 NCAPD3P42695 1498 aa36.56■■■■□ 3.44
CHEK1-215ENST00000533778 SMARCA2P51531 1590 aa36.55■■■■□ 3.44
CHEK1-215ENST00000533778 PEG3Q9GZU2 1588 aa36.42■■■■□ 3.42
CHEK1-215ENST00000533778 HMGXB3Q12766 1538 aa36.34■■■■□ 3.41
CHEK1-215ENST00000533778 RSF1Q96T23 1441 aaPredicted RBP36.3■■■■□ 3.4
CHEK1-215ENST00000533778 BAZ1BQ9UIG0 1483 aaKnown RBP36.3■■■■□ 3.4
CHEK1-215ENST00000533778 WIZO95785 1651 aa36.14■■■■□ 3.38
CHEK1-215ENST00000533778 TOP2AP11388 1531 aaKnown RBP35.84■■■■□ 3.33
CHEK1-215ENST00000533778 SUPT5HO00267 1087 aaKnown RBP35.61■■■■□ 3.29
CHEK1-215ENST00000533778 CADPSQ9ULU8 1353 aa35.52■■■■□ 3.28
CHEK1-215ENST00000533778 NESP48681 1621 aa35.5■■■■□ 3.27
CHEK1-215ENST00000533778 LAMC3Q9Y6N6 1575 aa35.5■■■■□ 3.27
CHEK1-215ENST00000533778 CCDC88BA6NC98 1476 aa35.45■■■■□ 3.27
CHEK1-215ENST00000533778 ERCC6Q03468 1493 aa35.39■■■■□ 3.26
CHEK1-215ENST00000533778 PDS5BQ9NTI5 1447 aa35.35■■■■□ 3.25
CHEK1-215ENST00000533778 CFTRP13569 1480 aa35.32■■■■□ 3.24
CHEK1-215ENST00000533778 FANCD2Q9BXW9 1451 aa35.07■■■■□ 3.2
CHEK1-215ENST00000533778 CEP164Q9UPV0 1460 aa35.01■■■■□ 3.19
CHEK1-215ENST00000533778 KIF21AQ7Z4S6 1674 aa34.99■■■■□ 3.19
CHEK1-215ENST00000533778 CUX2O14529 1486 aa34.92■■■■□ 3.18
CHEK1-215ENST00000533778 MRC2Q9UBG0 1479 aa34.9■■■■□ 3.18
CHEK1-215ENST00000533778 THOC2Q8NI27 1593 aaKnown RBP34.87■■■■□ 3.17
CHEK1-215ENST00000533778 PRDM2Q13029 1718 aa34.87■■■■□ 3.17
CHEK1-215ENST00000533778 WDR62O43379 1518 aa34.74■■■■□ 3.15
CHEK1-215ENST00000533778 URB2Q14146 1524 aaKnown RBP34.65■■■■□ 3.14
CHEK1-215ENST00000533778 ABCC8Q09428 1581 aa34.62■■■■□ 3.13
CHEK1-215ENST00000533778 TOPBP1Q92547 1522 aa34.5■■■■□ 3.11
CHEK1-215ENST00000533778 DNMBPQ6XZF7 1577 aa34.48■■■■□ 3.11
CHEK1-215ENST00000533778 CUX1P39880 1505 aa34.3■■■■□ 3.08
CHEK1-215ENST00000533778 IFT140Q96RY7 1462 aa34.29■■■■□ 3.08
CHEK1-215ENST00000533778 WRNQ14191 1432 aaPredicted RBP eCLIP34.25■■■■□ 3.07
CHEK1-215ENST00000533778 POLA1P09884 1462 aaPredicted RBP34.22■■■■□ 3.07
CHEK1-215ENST00000533778 FGD5Q6ZNL6 1462 aa34.18■■■■□ 3.06
CHEK1-215ENST00000533778 SOGA1O94964 1423 aa34.17■■■■□ 3.06
CHEK1-215ENST00000533778 RAD54L2Q9Y4B4 1467 aa34.07■■■■□ 3.05
CHEK1-215ENST00000533778 TOP2BQ02880 1626 aa34.07■■■■□ 3.04
CHEK1-215ENST00000533778 TARBP1Q13395 1621 aaKnown RBP34.05■■■■□ 3.04
CHEK1-215ENST00000533778 ZNF608Q9ULD9 1512 aaPredicted RBP34.04■■■■□ 3.04
CHEK1-215ENST00000533778 SYNJ1O43426 1573 aa34.03■■■■□ 3.04
CHEK1-215ENST00000533778 BIVM-ERCC5R4GMW8 1640 aa34.02■■■■□ 3.04
CHEK1-215ENST00000533778 TDRD9Q8NDG6 1382 aaKnown RBP33.92■■■■□ 3.02
CHEK1-215ENST00000533778 AQRO60306 1485 aaKnown RBP eCLIP33.92■■■■□ 3.027e-8■■■■■ 30.9
CHEK1-215ENST00000533778 ABCA10Q8WWZ4 1543 aa33.89■■■■□ 3.02
CHEK1-215ENST00000533778 WDR97A6NE52 1622 aa33.88■■■■□ 3.01
CHEK1-215ENST00000533778 EIF4G3O43432 1585 aaKnown RBP33.87■■■■□ 3.01
CHEK1-215ENST00000533778 GAPVD1Q14C86 1478 aa33.75■■■□□ 2.99
CHEK1-215ENST00000533778 GRIN2BQ13224 1484 aa33.72■■■□□ 2.99
CHEK1-215ENST00000533778 TRIM41Q8WV44 630 aa33.68■■■□□ 2.98
CHEK1-215ENST00000533778 ABCA5Q8WWZ7 1642 aa33.64■■■□□ 2.98
CHEK1-215ENST00000533778 DNAJC5Q9H3Z4 198 aa33.63■■■□□ 2.97
CHEK1-215ENST00000533778 OSCARQ8IYS5 282 aa33.61■■■□□ 2.97
CHEK1-215ENST00000533778 SNAPC4Q5SXM2 1469 aa33.6■■■□□ 2.97
CHEK1-215ENST00000533778 MAGI1Q96QZ7 1491 aaPredicted RBP33.6■■■□□ 2.97
CHEK1-215ENST00000533778 KIF27Q86VH2 1401 aa33.55■■■□□ 2.96
CHEK1-215ENST00000533778 FBLN2P98095 1184 aa33.55■■■□□ 2.96
CHEK1-215ENST00000533778 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
CHEK1-215ENST00000533778 PBRM1Q86U86 1689 aa33.5■■■□□ 2.95
CHEK1-215ENST00000533778 ERICH3Q5RHP9 1530 aa33.48■■■□□ 2.95
CHEK1-215ENST00000533778 SYNJ2O15056 1496 aa33.46■■■□□ 2.95
CHEK1-215ENST00000533778 FHAD1B1AJZ9 1412 aa33.39■■■□□ 2.94
CHEK1-215ENST00000533778 IGF1RP08069 1367 aa33.37■■■□□ 2.93
CHEK1-215ENST00000533778 CHIC1Q5VXU3 224 aa33.35■■■□□ 2.93
CHEK1-215ENST00000533778 CHD1O14646 1710 aa33.33■■■□□ 2.93
CHEK1-215ENST00000533778 ADAMTS12P58397 1594 aa33.33■■■□□ 2.93
CHEK1-215ENST00000533778 GRIN2AQ12879 1464 aa33.25■■■□□ 2.91
CHEK1-215ENST00000533778 CARMIL1Q5VZK9 1371 aa33.2■■■□□ 2.9
CHEK1-215ENST00000533778 RUSC2Q8N2Y8 1516 aa33.19■■■□□ 2.9
CHEK1-215ENST00000533778 CUL7Q14999 1698 aa33.18■■■□□ 2.9
CHEK1-215ENST00000533778 NUP160Q12769 1436 aa33.11■■■□□ 2.89
CHEK1-215ENST00000533778 EEA1Q15075 1411 aa33.09■■■□□ 2.89
CHEK1-215ENST00000533778 CLASP1Q7Z460 1538 aa33.07■■■□□ 2.88
CHEK1-215ENST00000533778 CSRNP3Q8WYN3 585 aa33.03■■■□□ 2.88
CHEK1-215ENST00000533778 CEP170Q5SW79 1584 aa33.01■■■□□ 2.88
CHEK1-215ENST00000533778 RAPGEF2Q9Y4G8 1499 aa33■■■□□ 2.87
CHEK1-215ENST00000533778 ARHGEF11O15085 1522 aa32.92■■■□□ 2.86
CHEK1-215ENST00000533778 FAM9AQ8IZU1 332 aaPredicted RBP32.91■■■□□ 2.86
CHEK1-215ENST00000533778 PRXQ9BXM0 1461 aa32.91■■■□□ 2.86
CHEK1-215ENST00000533778 KIAA0586Q9BVV6 1533 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms