RNA–Protein interactions for RNA: ENST00000528131.1

PLEC-214, Transcript of plectin, humanhuman

TSL 3

Gene PLEC, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEC-214ENST00000528131 NISCHQ9Y2I1 1504 aa46.34■■■■■ 5.01
PLEC-214ENST00000528131 CCDC180Q9P1Z9 1646 aa41.47■■■■■ 4.23
PLEC-214ENST00000528131 ABCC9O60706 1549 aa41.13■■■■■ 4.17
PLEC-214ENST00000528131 RB1CC1Q8TDY2 1594 aa39.34■■■■□ 3.89
PLEC-214ENST00000528131 NACADO15069 1562 aa39.17■■■■□ 3.86
PLEC-214ENST00000528131 DCAF8L2P0C7V8 631 aa38.93■■■■□ 3.82
PLEC-214ENST00000528131 MYO15BQ96JP2 1530 aa38.78■■■■□ 3.8
PLEC-214ENST00000528131 ZCCHC6Q5VYS8 1495 aaKnown RBP38.47■■■■□ 3.75
PLEC-214ENST00000528131 DCAF1Q9Y4B6 1507 aa38.36■■■■□ 3.73
PLEC-214ENST00000528131 UNC13AQ9UPW8 1703 aa38.35■■■■□ 3.73
PLEC-214ENST00000528131 PABPN1Q86U42 306 aaKnown RBP eCLIP38.33■■■■□ 3.73
PLEC-214ENST00000528131 DNAJC5BQ9UF47 199 aa38.32■■■■□ 3.72
PLEC-214ENST00000528131 BICRAQ9NZM4 1560 aa38.14■■■■□ 3.7
PLEC-214ENST00000528131 SHROOM4Q9ULL8 1493 aa37.8■■■■□ 3.64
PLEC-214ENST00000528131 SCRIBQ14160 1630 aa37.73■■■■□ 3.63
PLEC-214ENST00000528131 EIF4G1Q04637 1599 aaKnown RBP37.2■■■■□ 3.55
PLEC-214ENST00000528131 CC2D2AQ9P2K1 1620 aa37.18■■■■□ 3.54
PLEC-214ENST00000528131 CECR2Q9BXF3 1484 aa37.07■■■■□ 3.52
PLEC-214ENST00000528131 NCAPD3P42695 1498 aa36.16■■■■□ 3.38
PLEC-214ENST00000528131 SMARCA4P51532 1647 aa36.07■■■■□ 3.36
PLEC-214ENST00000528131 ATAD2BQ9ULI0 1458 aa36.05■■■■□ 3.36
PLEC-214ENST00000528131 SMARCA2P51531 1590 aa36.01■■■■□ 3.35
PLEC-214ENST00000528131 BAZ1AQ9NRL2 1556 aaPredicted RBP35.97■■■■□ 3.35
PLEC-214ENST00000528131 HMGXB3Q12766 1538 aa35.91■■■■□ 3.34
PLEC-214ENST00000528131 PEG3Q9GZU2 1588 aa35.76■■■■□ 3.32
PLEC-214ENST00000528131 BAZ1BQ9UIG0 1483 aaKnown RBP35.72■■■■□ 3.31
PLEC-214ENST00000528131 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
PLEC-214ENST00000528131 ERCC6Q03468 1493 aa35.54■■■■□ 3.28
PLEC-214ENST00000528131 CUX2O14529 1486 aa35.42■■■■□ 3.26
PLEC-214ENST00000528131 NESP48681 1621 aa35.39■■■■□ 3.26
PLEC-214ENST00000528131 LAMC3Q9Y6N6 1575 aa35.28■■■■□ 3.24
PLEC-214ENST00000528131 WIZO95785 1651 aa35.22■■■■□ 3.23
PLEC-214ENST00000528131 PDS5BQ9NTI5 1447 aa35.1■■■■□ 3.21
PLEC-214ENST00000528131 RSF1Q96T23 1441 aaPredicted RBP35.07■■■■□ 3.21
PLEC-214ENST00000528131 DNAJC5Q9H3Z4 198 aa35.07■■■■□ 3.2
PLEC-214ENST00000528131 CADPSQ9ULU8 1353 aa35.07■■■■□ 3.2
PLEC-214ENST00000528131 THOC2Q8NI27 1593 aaKnown RBP35.01■■■■□ 3.2
PLEC-214ENST00000528131 KIF21AQ7Z4S6 1674 aa34.94■■■■□ 3.18
PLEC-214ENST00000528131 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
PLEC-214ENST00000528131 MRC2Q9UBG0 1479 aa34.74■■■■□ 3.15
PLEC-214ENST00000528131 CFTRP13569 1480 aa34.72■■■■□ 3.15
PLEC-214ENST00000528131 CEP164Q9UPV0 1460 aa34.65■■■■□ 3.14
PLEC-214ENST00000528131 WDR62O43379 1518 aa34.64■■■■□ 3.14
PLEC-214ENST00000528131 FANCD2Q9BXW9 1451 aa34.64■■■■□ 3.14
PLEC-214ENST00000528131 CCDC88BA6NC98 1476 aa34.46■■■■□ 3.11
PLEC-214ENST00000528131 PRDM2Q13029 1718 aa34.35■■■■□ 3.09
PLEC-214ENST00000528131 URB2Q14146 1524 aaKnown RBP34.31■■■■□ 3.08
PLEC-214ENST00000528131 ABCC8Q09428 1581 aa34.03■■■■□ 3.04
PLEC-214ENST00000528131 TOPBP1Q92547 1522 aa34.01■■■■□ 3.04
PLEC-214ENST00000528131 IFT140Q96RY7 1462 aa33.98■■■■□ 3.03
PLEC-214ENST00000528131 DNMBPQ6XZF7 1577 aa33.92■■■■□ 3.02
PLEC-214ENST00000528131 OSCARQ8IYS5 282 aa33.85■■■■□ 3.01
PLEC-214ENST00000528131 ZNF608Q9ULD9 1512 aaPredicted RBP33.82■■■■□ 3
PLEC-214ENST00000528131 POLA1P09884 1462 aaPredicted RBP33.68■■■□□ 2.98
PLEC-214ENST00000528131 TARBP1Q13395 1621 aaKnown RBP33.68■■■□□ 2.98
PLEC-214ENST00000528131 SUPT5HO00267 1087 aaKnown RBP33.67■■■□□ 2.98
PLEC-214ENST00000528131 EIF4G3O43432 1585 aaKnown RBP33.65■■■□□ 2.98
PLEC-214ENST00000528131 AQRO60306 1485 aaKnown RBP eCLIP33.56■■■□□ 2.963e-7■■□□□ 13.2
PLEC-214ENST00000528131 TRIM41Q8WV44 630 aa33.56■■■□□ 2.96
PLEC-214ENST00000528131 SOGA1O94964 1423 aa33.54■■■□□ 2.96
PLEC-214ENST00000528131 RAD54L2Q9Y4B4 1467 aa33.51■■■□□ 2.96
PLEC-214ENST00000528131 CUX1P39880 1505 aa33.51■■■□□ 2.95
PLEC-214ENST00000528131 FGD5Q6ZNL6 1462 aa33.5■■■□□ 2.95
PLEC-214ENST00000528131 WDR97A6NE52 1622 aa33.44■■■□□ 2.94
PLEC-214ENST00000528131 TDRD9Q8NDG6 1382 aaKnown RBP33.41■■■□□ 2.94
PLEC-214ENST00000528131 CHD1O14646 1710 aa33.33■■■□□ 2.93
PLEC-214ENST00000528131 RIMBP3CA6NJZ7 1639 aa33.3■■■□□ 2.92
PLEC-214ENST00000528131 RIMBP3BA6NNM3 1639 aa33.3■■■□□ 2.92
PLEC-214ENST00000528131 RIMBP3Q9UFD9 1639 aa33.3■■■□□ 2.92
PLEC-214ENST00000528131 FBLN2P98095 1184 aa33.29■■■□□ 2.92
PLEC-214ENST00000528131 ARHGEF11O15085 1522 aa33.25■■■□□ 2.91
PLEC-214ENST00000528131 GRIN2BQ13224 1484 aa33.25■■■□□ 2.91
PLEC-214ENST00000528131 SNAPC4Q5SXM2 1469 aa33.25■■■□□ 2.91
PLEC-214ENST00000528131 MAGI1Q96QZ7 1491 aaPredicted RBP33.23■■■□□ 2.91
PLEC-214ENST00000528131 ABCA10Q8WWZ4 1543 aa33.18■■■□□ 2.9
PLEC-214ENST00000528131 GAPVD1Q14C86 1478 aa33.15■■■□□ 2.9
PLEC-214ENST00000528131 CHMP7Q8WUX9 453 aaPredicted RBP33.14■■■□□ 2.9
PLEC-214ENST00000528131 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.897e-7■■■■■ 41.8
PLEC-214ENST00000528131 SYNJ2O15056 1496 aa33.09■■■□□ 2.89
PLEC-214ENST00000528131 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
PLEC-214ENST00000528131 ABCA5Q8WWZ7 1642 aa33.06■■■□□ 2.88
PLEC-214ENST00000528131 BIVM-ERCC5R4GMW8 1640 aa33.06■■■□□ 2.88
PLEC-214ENST00000528131 PBRM1Q86U86 1689 aa33.05■■■□□ 2.88
PLEC-214ENST00000528131 SYNJ1O43426 1573 aa33.04■■■□□ 2.88
PLEC-214ENST00000528131 CLASP1Q7Z460 1538 aa33.01■■■□□ 2.87
PLEC-214ENST00000528131 CYB5RLQ6IPT4 315 aa32.99■■■□□ 2.87
PLEC-214ENST00000528131 ARAP1Q96P48 1450 aa32.94■■■□□ 2.86
PLEC-214ENST00000528131 GRIN2AQ12879 1464 aa32.8■■■□□ 2.84
PLEC-214ENST00000528131 ADAMTS12P58397 1594 aa32.79■■■□□ 2.84
PLEC-214ENST00000528131 ERICH3Q5RHP9 1530 aa32.77■■■□□ 2.84
PLEC-214ENST00000528131 FHAD1B1AJZ9 1412 aa32.77■■■□□ 2.84
PLEC-214ENST00000528131 NUP160Q12769 1436 aa32.69■■■□□ 2.82
PLEC-214ENST00000528131 CEP170Q5SW79 1584 aa32.62■■■□□ 2.81
PLEC-214ENST00000528131 TRHP20396 242 aaPredicted RBP32.52■■■□□ 2.8
PLEC-214ENST00000528131 SHROOM2Q13796 1616 aa32.49■■■□□ 2.79
PLEC-214ENST00000528131 KIF27Q86VH2 1401 aa32.47■■■□□ 2.79
PLEC-214ENST00000528131 ERCC6L2Q5T890 1561 aa32.45■■■□□ 2.78
PLEC-214ENST00000528131 IGF1RP08069 1367 aa32.41■■■□□ 2.78
PLEC-214ENST00000528131 JPH4Q96JJ6 628 aa32.36■■■□□ 2.77
PLEC-214ENST00000528131 CUL7Q14999 1698 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms