RNA–Protein interactions for RNA: ENST00000271877.11

UBAP2L-201, Transcript of ubiquitin associated protein 2 like, humanhuman

TSL 5 BASIC

Gene UBAP2L, Length 3,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2L-201ENST00000271877 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
UBAP2L-201ENST00000271877 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.57
UBAP2L-201ENST00000271877 SHROOM4Q9ULL8 1493 aa18.49■□□□□ 0.55
UBAP2L-201ENST00000271877 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
UBAP2L-201ENST00000271877 CCDC180Q9P1Z9 1646 aa18.35■□□□□ 0.53
UBAP2L-201ENST00000271877 SUPT5HO00267 1087 aaKnown RBP17.95■□□□□ 0.46
UBAP2L-201ENST00000271877 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
UBAP2L-201ENST00000271877 PPARGC1BQ86YN6 1023 aaKnown RBP17.73■□□□□ 0.43
UBAP2L-201ENST00000271877 HRCP23327 699 aa17.66■□□□□ 0.42
UBAP2L-201ENST00000271877 ABCC9O60706 1549 aa17.57■□□□□ 0.4
UBAP2L-201ENST00000271877 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
UBAP2L-201ENST00000271877 LOC105371045A0A1W2PR82 267 aa17.52■□□□□ 0.39
UBAP2L-201ENST00000271877 PCGF6Q9BYE7 350 aa17.41■□□□□ 0.38
UBAP2L-201ENST00000271877 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.37
UBAP2L-201ENST00000271877 NACADO15069 1562 aa17.25■□□□□ 0.35
UBAP2L-201ENST00000271877 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
UBAP2L-201ENST00000271877 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
UBAP2L-201ENST00000271877 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
UBAP2L-201ENST00000271877 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
UBAP2L-201ENST00000271877 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
UBAP2L-201ENST00000271877 WIZO95785 1651 aa17.01■□□□□ 0.31
UBAP2L-201ENST00000271877 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
UBAP2L-201ENST00000271877 UNC13AQ9UPW8 1703 aa16.84■□□□□ 0.29
UBAP2L-201ENST00000271877 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
UBAP2L-201ENST00000271877 TRIM26Q12899 539 aaPredicted RBP16.78■□□□□ 0.28
UBAP2L-201ENST00000271877 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
UBAP2L-201ENST00000271877 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
UBAP2L-201ENST00000271877 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
UBAP2L-201ENST00000271877 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
UBAP2L-201ENST00000271877 FAM9AQ8IZU1 332 aaPredicted RBP16.58■□□□□ 0.24
UBAP2L-201ENST00000271877 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
UBAP2L-201ENST00000271877 SMARCA2P51531 1590 aa16.52■□□□□ 0.24
UBAP2L-201ENST00000271877 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
UBAP2L-201ENST00000271877 SOGA1O94964 1423 aa16.45■□□□□ 0.22
UBAP2L-201ENST00000271877 SMARCA4P51532 1647 aa16.42■□□□□ 0.22
UBAP2L-201ENST00000271877 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
UBAP2L-201ENST00000271877 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
UBAP2L-201ENST00000271877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.36■□□□□ 0.21
UBAP2L-201ENST00000271877 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
UBAP2L-201ENST00000271877 NEUROD1Q13562 356 aa16.34■□□□□ 0.21
UBAP2L-201ENST00000271877 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
UBAP2L-201ENST00000271877 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
UBAP2L-201ENST00000271877 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
UBAP2L-201ENST00000271877 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
UBAP2L-201ENST00000271877 ACIN1Q9UKV3 1341 aaKnown RBP16.06■□□□□ 0.16
UBAP2L-201ENST00000271877 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
UBAP2L-201ENST00000271877 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
UBAP2L-201ENST00000271877 KIF21BO75037 1637 aa16.01■□□□□ 0.15
UBAP2L-201ENST00000271877 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
UBAP2L-201ENST00000271877 RAPGEF2Q9Y4G8 1499 aa15.98■□□□□ 0.15
UBAP2L-201ENST00000271877 GTF3C3Q9Y5Q9 886 aa15.92■□□□□ 0.14
UBAP2L-201ENST00000271877 CC2D2AQ9P2K1 1620 aa15.91■□□□□ 0.14
UBAP2L-201ENST00000271877 CLIP1P30622 1438 aa15.91■□□□□ 0.14
UBAP2L-201ENST00000271877 DIEXFQ68CQ4 756 aaKnown RBP15.88■□□□□ 0.13
UBAP2L-201ENST00000271877 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
UBAP2L-201ENST00000271877 ARAP1Q96P48 1450 aa15.86■□□□□ 0.13
UBAP2L-201ENST00000271877 MIER1Q8N108 512 aa15.85■□□□□ 0.13
UBAP2L-201ENST00000271877 TOP2BQ02880 1626 aa15.84■□□□□ 0.13
UBAP2L-201ENST00000271877 CCER1Q8TC90 406 aaPredicted RBP15.83■□□□□ 0.12
UBAP2L-201ENST00000271877 GOLGA3Q08378 1498 aa15.82■□□□□ 0.12
UBAP2L-201ENST00000271877 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
UBAP2L-201ENST00000271877 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
UBAP2L-201ENST00000271877 ATAD2BQ9ULI0 1458 aa15.8■□□□□ 0.12
UBAP2L-201ENST00000271877 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
UBAP2L-201ENST00000271877 BAZ1BQ9UIG0 1483 aaKnown RBP15.77■□□□□ 0.11
UBAP2L-201ENST00000271877 CUX1P39880 1505 aa15.74■□□□□ 0.11
UBAP2L-201ENST00000271877 VPS8Q8N3P4 1428 aa15.73■□□□□ 0.11
UBAP2L-201ENST00000271877 PRXQ9BXM0 1461 aa15.72■□□□□ 0.11
UBAP2L-201ENST00000271877 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
UBAP2L-201ENST00000271877 MAPKBP1O60336 1514 aa15.72■□□□□ 0.11
UBAP2L-201ENST00000271877 DHX57Q6P158 1386 aaKnown RBP15.7■□□□□ 0.1
UBAP2L-201ENST00000271877 LRRIQ1Q96JM4 1722 aa15.69■□□□□ 0.1
UBAP2L-201ENST00000271877 EEA1Q15075 1411 aa15.68■□□□□ 0.1
UBAP2L-201ENST00000271877 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
UBAP2L-201ENST00000271877 KCNH8Q96L42 1107 aa15.68■□□□□ 0.1
UBAP2L-201ENST00000271877 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
UBAP2L-201ENST00000271877 ZNF316A6NFI3 1004 aaPredicted RBP15.66■□□□□ 0.1
UBAP2L-201ENST00000271877 CUX2O14529 1486 aa15.64■□□□□ 0.09
UBAP2L-201ENST00000271877 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
UBAP2L-201ENST00000271877 ARHGAP35Q9NRY4 1499 aa15.59■□□□□ 0.09
UBAP2L-201ENST00000271877 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
UBAP2L-201ENST00000271877 RRBP1Q9P2E9 1410 aaKnown RBP15.56■□□□□ 0.08
UBAP2L-201ENST00000271877 PRDM2Q13029 1718 aa15.55■□□□□ 0.08
UBAP2L-201ENST00000271877 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
UBAP2L-201ENST00000271877 KDM5BQ9UGL1 1544 aa15.52■□□□□ 0.08
UBAP2L-201ENST00000271877 UBTFP17480 764 aaKnown RBP15.51■□□□□ 0.07
UBAP2L-201ENST00000271877 WDR97A6NE52 1622 aa15.49■□□□□ 0.07
UBAP2L-201ENST00000271877 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
UBAP2L-201ENST00000271877 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
UBAP2L-201ENST00000271877 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
UBAP2L-201ENST00000271877 DENND4BO75064 1496 aaPredicted RBP15.42■□□□□ 0.06
UBAP2L-201ENST00000271877 CFAP43Q8NDM7 1665 aa15.41■□□□□ 0.06
UBAP2L-201ENST00000271877 TIAM1Q13009 1591 aa15.39■□□□□ 0.05
UBAP2L-201ENST00000271877 CFTRP13569 1480 aa15.39■□□□□ 0.05
UBAP2L-201ENST00000271877 RANGAP1P46060 587 aaPredicted RBP15.38■□□□□ 0.05
UBAP2L-201ENST00000271877 SUPT16HQ9Y5B9 1047 aaKnown RBP15.38■□□□□ 0.05
UBAP2L-201ENST00000271877 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
UBAP2L-201ENST00000271877 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
UBAP2L-201ENST00000271877 PCF11O94913 1555 aaKnown RBP15.37■□□□□ 0.05
UBAP2L-201ENST00000271877 PHLDB1Q86UU1 1377 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms