RNA–Protein interactions for RNA: ENST00000474626.5

RPS18-232, Transcript of ribosomal protein S18, humanhuman

TSL 3

Gene RPS18, Length 639 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS18-232ENST00000474626 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
RPS18-232ENST00000474626 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
RPS18-232ENST00000474626 ABCC9O60706 1549 aa20.68■□□□□ 0.9
RPS18-232ENST00000474626 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
RPS18-232ENST00000474626 RB1CC1Q8TDY2 1594 aa19.62■□□□□ 0.73
RPS18-232ENST00000474626 DCAF1Q9Y4B6 1507 aa19.58■□□□□ 0.73
RPS18-232ENST00000474626 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
RPS18-232ENST00000474626 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
RPS18-232ENST00000474626 NACADO15069 1562 aa19.44■□□□□ 0.7
RPS18-232ENST00000474626 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
RPS18-232ENST00000474626 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
RPS18-232ENST00000474626 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
RPS18-232ENST00000474626 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
RPS18-232ENST00000474626 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
RPS18-232ENST00000474626 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
RPS18-232ENST00000474626 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.58
RPS18-232ENST00000474626 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
RPS18-232ENST00000474626 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
RPS18-232ENST00000474626 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
RPS18-232ENST00000474626 SMARCA4P51532 1647 aa18.15■□□□□ 0.5
RPS18-232ENST00000474626 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
RPS18-232ENST00000474626 RSF1Q96T23 1441 aaPredicted RBP18.08■□□□□ 0.49
RPS18-232ENST00000474626 DNAJC5Q9H3Z4 198 aa18.08■□□□□ 0.48
RPS18-232ENST00000474626 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
RPS18-232ENST00000474626 SMARCA2P51531 1590 aa18■□□□□ 0.47
RPS18-232ENST00000474626 ATAD2BQ9ULI0 1458 aa17.96■□□□□ 0.47
RPS18-232ENST00000474626 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
RPS18-232ENST00000474626 CUX2O14529 1486 aa17.94■□□□□ 0.46
RPS18-232ENST00000474626 WIZO95785 1651 aa17.9■□□□□ 0.46
RPS18-232ENST00000474626 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
RPS18-232ENST00000474626 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
RPS18-232ENST00000474626 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
RPS18-232ENST00000474626 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
RPS18-232ENST00000474626 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
RPS18-232ENST00000474626 NESP48681 1621 aa17.69■□□□□ 0.42
RPS18-232ENST00000474626 THOC2Q8NI27 1593 aaKnown RBP17.64■□□□□ 0.41
RPS18-232ENST00000474626 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
RPS18-232ENST00000474626 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
RPS18-232ENST00000474626 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
RPS18-232ENST00000474626 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
RPS18-232ENST00000474626 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
RPS18-232ENST00000474626 CFTRP13569 1480 aa17.4■□□□□ 0.38
RPS18-232ENST00000474626 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.37
RPS18-232ENST00000474626 WDR62O43379 1518 aa17.31■□□□□ 0.36
RPS18-232ENST00000474626 PRDM2Q13029 1718 aa17.27■□□□□ 0.36
RPS18-232ENST00000474626 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
RPS18-232ENST00000474626 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
RPS18-232ENST00000474626 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
RPS18-232ENST00000474626 ABCC8Q09428 1581 aa17.09■□□□□ 0.33
RPS18-232ENST00000474626 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.325e-25■□□□□ 8.1
RPS18-232ENST00000474626 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
RPS18-232ENST00000474626 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
RPS18-232ENST00000474626 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
RPS18-232ENST00000474626 TOP2BQ02880 1626 aa16.96■□□□□ 0.31
RPS18-232ENST00000474626 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
RPS18-232ENST00000474626 CUX1P39880 1505 aa16.96■□□□□ 0.3
RPS18-232ENST00000474626 TOPBP1Q92547 1522 aa16.96■□□□□ 0.3
RPS18-232ENST00000474626 BIVM-ERCC5R4GMW8 1640 aa16.95■□□□□ 0.3
RPS18-232ENST00000474626 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
RPS18-232ENST00000474626 RIMBP3CA6NJZ7 1639 aa16.91■□□□□ 0.3
RPS18-232ENST00000474626 RIMBP3BA6NNM3 1639 aa16.91■□□□□ 0.3
RPS18-232ENST00000474626 RIMBP3Q9UFD9 1639 aa16.91■□□□□ 0.3
RPS18-232ENST00000474626 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
RPS18-232ENST00000474626 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
RPS18-232ENST00000474626 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
RPS18-232ENST00000474626 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
RPS18-232ENST00000474626 EIF4G3O43432 1585 aaKnown RBP16.82■□□□□ 0.28
RPS18-232ENST00000474626 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
RPS18-232ENST00000474626 SOGA1O94964 1423 aa16.79■□□□□ 0.28
RPS18-232ENST00000474626 CHD1O14646 1710 aa16.76■□□□□ 0.27
RPS18-232ENST00000474626 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
RPS18-232ENST00000474626 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
RPS18-232ENST00000474626 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
RPS18-232ENST00000474626 EEA1Q15075 1411 aa16.71■□□□□ 0.27
RPS18-232ENST00000474626 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
RPS18-232ENST00000474626 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
RPS18-232ENST00000474626 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.253e-21■■■■■ 65.8
RPS18-232ENST00000474626 ARAP1Q96P48 1450 aa16.62■□□□□ 0.25
RPS18-232ENST00000474626 ABCA5Q8WWZ7 1642 aa16.61■□□□□ 0.25
RPS18-232ENST00000474626 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
RPS18-232ENST00000474626 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
RPS18-232ENST00000474626 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
RPS18-232ENST00000474626 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
RPS18-232ENST00000474626 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
RPS18-232ENST00000474626 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
RPS18-232ENST00000474626 RUSC2Q8N2Y8 1516 aa16.55■□□□□ 0.24
RPS18-232ENST00000474626 IGF1RP08069 1367 aa16.54■□□□□ 0.24
RPS18-232ENST00000474626 FBLN2P98095 1184 aa16.53■□□□□ 0.24
RPS18-232ENST00000474626 CLASP1Q7Z460 1538 aa16.52■□□□□ 0.24
RPS18-232ENST00000474626 SNAPC4Q5SXM2 1469 aa16.52■□□□□ 0.23
RPS18-232ENST00000474626 CUL7Q14999 1698 aa16.5■□□□□ 0.23
RPS18-232ENST00000474626 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
RPS18-232ENST00000474626 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
RPS18-232ENST00000474626 TRHP20396 242 aaPredicted RBP16.49■□□□□ 0.23
RPS18-232ENST00000474626 FAM9AQ8IZU1 332 aaPredicted RBP16.47■□□□□ 0.23
RPS18-232ENST00000474626 CARMIL1Q5VZK9 1371 aa16.46■□□□□ 0.23
RPS18-232ENST00000474626 PRXQ9BXM0 1461 aa16.46■□□□□ 0.23
RPS18-232ENST00000474626 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
RPS18-232ENST00000474626 KIF21BO75037 1637 aa16.43■□□□□ 0.22
RPS18-232ENST00000474626 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms