RNA–Protein interactions for RNA: ENST00000435721.5

EIPR1-204, Transcript of EARP complex and GARP complex interacting protein 1, humanhuman

TSL 3

Gene EIPR1, Length 672 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIPR1-204ENST00000435721 NISCHQ9Y2I1 1504 aa46.64■■■■■ 5.06
EIPR1-204ENST00000435721 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
EIPR1-204ENST00000435721 ABCC9O60706 1549 aa40.67■■■■■ 4.1
EIPR1-204ENST00000435721 RB1CC1Q8TDY2 1594 aa39.09■■■■□ 3.85
EIPR1-204ENST00000435721 NACADO15069 1562 aa39.03■■■■□ 3.84
EIPR1-204ENST00000435721 ZCCHC6Q5VYS8 1495 aaKnown RBP38.86■■■■□ 3.81
EIPR1-204ENST00000435721 DCAF8L2P0C7V8 631 aa38.83■■■■□ 3.81
EIPR1-204ENST00000435721 MYO15BQ96JP2 1530 aa38.78■■■■□ 3.8
EIPR1-204ENST00000435721 DCAF1Q9Y4B6 1507 aa38.59■■■■□ 3.77
EIPR1-204ENST00000435721 UNC13AQ9UPW8 1703 aa38.34■■■■□ 3.73
EIPR1-204ENST00000435721 BICRAQ9NZM4 1560 aa38.01■■■■□ 3.67
EIPR1-204ENST00000435721 PABPN1Q86U42 306 aaKnown RBP eCLIP37.95■■■■□ 3.67
EIPR1-204ENST00000435721 SCRIBQ14160 1630 aa37.89■■■■□ 3.66
EIPR1-204ENST00000435721 SHROOM4Q9ULL8 1493 aa37.51■■■■□ 3.59
EIPR1-204ENST00000435721 DNAJC5BQ9UF47 199 aa37.42■■■■□ 3.58
EIPR1-204ENST00000435721 EIF4G1Q04637 1599 aaKnown RBP36.95■■■■□ 3.51
EIPR1-204ENST00000435721 CC2D2AQ9P2K1 1620 aa36.83■■■■□ 3.49
EIPR1-204ENST00000435721 CECR2Q9BXF3 1484 aa36.54■■■■□ 3.44
EIPR1-204ENST00000435721 SMARCA4P51532 1647 aa36.24■■■■□ 3.39
EIPR1-204ENST00000435721 BAZ1AQ9NRL2 1556 aaPredicted RBP36.15■■■■□ 3.38
EIPR1-204ENST00000435721 ATAD2BQ9ULI0 1458 aa36.03■■■■□ 3.36
EIPR1-204ENST00000435721 NCAPD3P42695 1498 aa36■■■■□ 3.35
EIPR1-204ENST00000435721 MROH2BQ7Z745 1585 aa35.98■■■■□ 3.35
EIPR1-204ENST00000435721 SMARCA2P51531 1590 aa35.96■■■■□ 3.35
EIPR1-204ENST00000435721 PEG3Q9GZU2 1588 aa35.89■■■■□ 3.34
EIPR1-204ENST00000435721 HMGXB3Q12766 1538 aa35.86■■■■□ 3.33
EIPR1-204ENST00000435721 BAZ1BQ9UIG0 1483 aaKnown RBP35.7■■■■□ 3.31
EIPR1-204ENST00000435721 WIZO95785 1651 aa35.59■■■■□ 3.29
EIPR1-204ENST00000435721 RSF1Q96T23 1441 aaPredicted RBP35.49■■■■□ 3.27
EIPR1-204ENST00000435721 NESP48681 1621 aa35.21■■■■□ 3.23
EIPR1-204ENST00000435721 TOP2AP11388 1531 aaKnown RBP35.18■■■■□ 3.22
EIPR1-204ENST00000435721 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
EIPR1-204ENST00000435721 ERCC6Q03468 1493 aa35.01■■■■□ 3.19
EIPR1-204ENST00000435721 CADPSQ9ULU8 1353 aa34.92■■■■□ 3.18
EIPR1-204ENST00000435721 KIF21AQ7Z4S6 1674 aa34.84■■■■□ 3.17
EIPR1-204ENST00000435721 PDS5BQ9NTI5 1447 aa34.79■■■■□ 3.16
EIPR1-204ENST00000435721 CCDC88BA6NC98 1476 aa34.75■■■■□ 3.15
EIPR1-204ENST00000435721 THOC2Q8NI27 1593 aaKnown RBP34.74■■■■□ 3.15
EIPR1-204ENST00000435721 CFTRP13569 1480 aa34.74■■■■□ 3.15
EIPR1-204ENST00000435721 CUX2O14529 1486 aa34.71■■■■□ 3.15
EIPR1-204ENST00000435721 PRDM2Q13029 1718 aa34.56■■■■□ 3.12
EIPR1-204ENST00000435721 FANCD2Q9BXW9 1451 aa34.55■■■■□ 3.12
EIPR1-204ENST00000435721 CEP164Q9UPV0 1460 aa34.51■■■■□ 3.11
EIPR1-204ENST00000435721 MRC2Q9UBG0 1479 aa34.49■■■■□ 3.11
EIPR1-204ENST00000435721 WDR62O43379 1518 aa34.42■■■■□ 3.1
EIPR1-204ENST00000435721 SUPT5HO00267 1087 aaKnown RBP34.42■■■■□ 3.1
EIPR1-204ENST00000435721 URB2Q14146 1524 aaKnown RBP34.25■■■■□ 3.07
EIPR1-204ENST00000435721 TOPBP1Q92547 1522 aa34.01■■■■□ 3.04
EIPR1-204ENST00000435721 DNMBPQ6XZF7 1577 aa33.98■■■■□ 3.03
EIPR1-204ENST00000435721 ABCC8Q09428 1581 aa33.93■■■■□ 3.02
EIPR1-204ENST00000435721 IFT140Q96RY7 1462 aa33.78■■■■□ 3
EIPR1-204ENST00000435721 CUX1P39880 1505 aa33.75■■■□□ 2.99
EIPR1-204ENST00000435721 POLA1P09884 1462 aaPredicted RBP33.72■■■□□ 2.99
EIPR1-204ENST00000435721 DNAJC5Q9H3Z4 198 aa33.7■■■□□ 2.99
EIPR1-204ENST00000435721 TARBP1Q13395 1621 aaKnown RBP33.7■■■□□ 2.99
EIPR1-204ENST00000435721 ZNF608Q9ULD9 1512 aaPredicted RBP33.69■■■□□ 2.98
EIPR1-204ENST00000435721 FGD5Q6ZNL6 1462 aa33.63■■■□□ 2.97
EIPR1-204ENST00000435721 EIF4G3O43432 1585 aaKnown RBP33.58■■■□□ 2.97
EIPR1-204ENST00000435721 RAD54L2Q9Y4B4 1467 aa33.56■■■□□ 2.96
EIPR1-204ENST00000435721 SOGA1O94964 1423 aa33.52■■■□□ 2.96
EIPR1-204ENST00000435721 BIVM-ERCC5R4GMW8 1640 aa33.46■■■□□ 2.95
EIPR1-204ENST00000435721 SYNJ1O43426 1573 aa33.45■■■□□ 2.95
EIPR1-204ENST00000435721 AQRO60306 1485 aaKnown RBP eCLIP33.44■■■□□ 2.942e-8■■■■■ 31.3
EIPR1-204ENST00000435721 WDR97A6NE52 1622 aa33.44■■■□□ 2.94
EIPR1-204ENST00000435721 WRNQ14191 1432 aaPredicted RBP eCLIP33.44■■■□□ 2.94
EIPR1-204ENST00000435721 TOP2BQ02880 1626 aa33.43■■■□□ 2.94
EIPR1-204ENST00000435721 TDRD9Q8NDG6 1382 aaKnown RBP33.35■■■□□ 2.93
EIPR1-204ENST00000435721 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
EIPR1-204ENST00000435721 ABCA5Q8WWZ7 1642 aa33.22■■■□□ 2.91
EIPR1-204ENST00000435721 CHD1O14646 1710 aa33.19■■■□□ 2.9
EIPR1-204ENST00000435721 PBRM1Q86U86 1689 aa33.18■■■□□ 2.9
EIPR1-204ENST00000435721 OSCARQ8IYS5 282 aa33.17■■■□□ 2.9
EIPR1-204ENST00000435721 GRIN2BQ13224 1484 aa33.16■■■□□ 2.9
EIPR1-204ENST00000435721 SNAPC4Q5SXM2 1469 aa33.16■■■□□ 2.9
EIPR1-204ENST00000435721 GAPVD1Q14C86 1478 aa33.15■■■□□ 2.9
EIPR1-204ENST00000435721 MAGI1Q96QZ7 1491 aaPredicted RBP33.09■■■□□ 2.89
EIPR1-204ENST00000435721 FBLN2P98095 1184 aa32.96■■■□□ 2.87
EIPR1-204ENST00000435721 SYNJ2O15056 1496 aa32.96■■■□□ 2.87
EIPR1-204ENST00000435721 ADAMTS12P58397 1594 aa32.9■■■□□ 2.86
EIPR1-204ENST00000435721 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
EIPR1-204ENST00000435721 CHMP7Q8WUX9 453 aaPredicted RBP32.86■■■□□ 2.85
EIPR1-204ENST00000435721 CLASP1Q7Z460 1538 aa32.82■■■□□ 2.84
EIPR1-204ENST00000435721 RIMBP3CA6NJZ7 1639 aa32.8■■■□□ 2.84
EIPR1-204ENST00000435721 RIMBP3BA6NNM3 1639 aa32.8■■■□□ 2.84
EIPR1-204ENST00000435721 RIMBP3Q9UFD9 1639 aa32.8■■■□□ 2.84
EIPR1-204ENST00000435721 GRIN2AQ12879 1464 aa32.76■■■□□ 2.84
EIPR1-204ENST00000435721 ARHGEF11O15085 1522 aa32.76■■■□□ 2.83
EIPR1-204ENST00000435721 FHAD1B1AJZ9 1412 aa32.76■■■□□ 2.83
EIPR1-204ENST00000435721 KIF27Q86VH2 1401 aa32.72■■■□□ 2.83
EIPR1-204ENST00000435721 CEP170Q5SW79 1584 aa32.65■■■□□ 2.82
EIPR1-204ENST00000435721 NUP160Q12769 1436 aa32.63■■■□□ 2.81
EIPR1-204ENST00000435721 IGF1RP08069 1367 aa32.61■■■□□ 2.81
EIPR1-204ENST00000435721 CUL7Q14999 1698 aa32.59■■■□□ 2.81
EIPR1-204ENST00000435721 TRIM41Q8WV44 630 aa32.53■■■□□ 2.8
EIPR1-204ENST00000435721 ARAP1Q96P48 1450 aa32.5■■■□□ 2.79
EIPR1-204ENST00000435721 RUSC2Q8N2Y8 1516 aa32.48■■■□□ 2.79
EIPR1-204ENST00000435721 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
EIPR1-204ENST00000435721 CARMIL1Q5VZK9 1371 aa32.4■■■□□ 2.78
EIPR1-204ENST00000435721 ERCC6L2Q5T890 1561 aa32.37■■■□□ 2.77
EIPR1-204ENST00000435721 CYB5RLQ6IPT4 315 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms