Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 AC026150.2-201ENST00000564693 1156 ntBASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SEC22CQ9BRL7 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AC026992.2-203ENST00000563004 2419 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AC004623.1-201ENST00000624592 2127 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AL021155.1-201ENST00000438808 2637 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AC009474.1-201ENST00000455096 1565 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SPDYE11-202ENST00000450699 704 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AC079140.1-201ENST00000508039 487 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AC079776.4-201ENST00000511039 504 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 KRT8P23-201ENST00000560090 1207 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SPDYE9P-201ENST00000570642 692 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AL121912.1-201ENST00000603683 238 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AL133215.2-201ENST00000609242 977 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SPDYE10P-202ENST00000612005 668 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SPDYE8P-202ENST00000612377 668 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 LINC00628-201ENST00000628516 1289 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 AL158070.2-201ENST00000623713 1621 ntBASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.32□□□□□ -0.44
SEC22CQ9BRL7 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms