RNA–Protein interactions for RNA: ENST00000427978.6

TRPM4-202, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best) BASIC

Gene TRPM4, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-202ENST00000427978 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
TRPM4-202ENST00000427978 SHROOM4Q9ULL8 1493 aa23.65■■□□□ 1.38
TRPM4-202ENST00000427978 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
TRPM4-202ENST00000427978 DCAF8L2P0C7V8 631 aa23.21■■□□□ 1.31
TRPM4-202ENST00000427978 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
TRPM4-202ENST00000427978 ZCCHC6Q5VYS8 1495 aaKnown RBP22.25■■□□□ 1.15
TRPM4-202ENST00000427978 PCGF6Q9BYE7 350 aa22.19■■□□□ 1.14
TRPM4-202ENST00000427978 MYO15BQ96JP2 1530 aa22.07■■□□□ 1.12
TRPM4-202ENST00000427978 LOC105371045A0A1W2PR82 267 aa21.99■■□□□ 1.11
TRPM4-202ENST00000427978 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
TRPM4-202ENST00000427978 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
TRPM4-202ENST00000427978 HRCP23327 699 aa21.89■■□□□ 1.09
TRPM4-202ENST00000427978 PPARGC1BQ86YN6 1023 aaKnown RBP21.83■■□□□ 1.09
TRPM4-202ENST00000427978 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
TRPM4-202ENST00000427978 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
TRPM4-202ENST00000427978 TRIM26Q12899 539 aaPredicted RBP21.34■■□□□ 1.01
TRPM4-202ENST00000427978 SCRIBQ14160 1630 aa21.3■■□□□ 1
TRPM4-202ENST00000427978 DCAF1Q9Y4B6 1507 aa21.22■□□□□ 0.99
TRPM4-202ENST00000427978 TTBK1Q5TCY1 1321 aaPredicted RBP21.17■□□□□ 0.98
TRPM4-202ENST00000427978 ABCC9O60706 1549 aa21.16■□□□□ 0.98
TRPM4-202ENST00000427978 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.97
TRPM4-202ENST00000427978 RB1CC1Q8TDY2 1594 aa20.94■□□□□ 0.94
TRPM4-202ENST00000427978 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.93
TRPM4-202ENST00000427978 ZEB1P37275 1124 aaPredicted RBP20.85■□□□□ 0.93
TRPM4-202ENST00000427978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.82■□□□□ 0.92
TRPM4-202ENST00000427978 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
TRPM4-202ENST00000427978 MROH2BQ7Z745 1585 aa20.7■□□□□ 0.9
TRPM4-202ENST00000427978 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
TRPM4-202ENST00000427978 RANGAP1P46060 587 aaPredicted RBP20.62■□□□□ 0.89
TRPM4-202ENST00000427978 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
TRPM4-202ENST00000427978 WIZO95785 1651 aa20.58■□□□□ 0.88
TRPM4-202ENST00000427978 NACADO15069 1562 aa20.48■□□□□ 0.87
TRPM4-202ENST00000427978 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
TRPM4-202ENST00000427978 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
TRPM4-202ENST00000427978 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
TRPM4-202ENST00000427978 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
TRPM4-202ENST00000427978 DIEXFQ68CQ4 756 aaKnown RBP20.3■□□□□ 0.84
TRPM4-202ENST00000427978 SOGA1O94964 1423 aa20.3■□□□□ 0.84
TRPM4-202ENST00000427978 CSRNP3Q8WYN3 585 aa20.29■□□□□ 0.84
TRPM4-202ENST00000427978 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
TRPM4-202ENST00000427978 BAZ1AQ9NRL2 1556 aaPredicted RBP20.25■□□□□ 0.83
TRPM4-202ENST00000427978 CEP162Q5TB80 1403 aa20.22■□□□□ 0.83
TRPM4-202ENST00000427978 APLP2Q06481 763 aa20.2■□□□□ 0.82
TRPM4-202ENST00000427978 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
TRPM4-202ENST00000427978 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
TRPM4-202ENST00000427978 CENPBP07199 599 aaPredicted RBP20.11■□□□□ 0.81
TRPM4-202ENST00000427978 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
TRPM4-202ENST00000427978 GTF3C3Q9Y5Q9 886 aa20.09■□□□□ 0.81
TRPM4-202ENST00000427978 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
TRPM4-202ENST00000427978 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
TRPM4-202ENST00000427978 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
TRPM4-202ENST00000427978 TNIKQ9UKE5 1360 aa20.02■□□□□ 0.8
TRPM4-202ENST00000427978 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
TRPM4-202ENST00000427978 ZNF316A6NFI3 1004 aaPredicted RBP19.97■□□□□ 0.79
TRPM4-202ENST00000427978 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
TRPM4-202ENST00000427978 ITGAEP38570 1179 aa19.93■□□□□ 0.78
TRPM4-202ENST00000427978 GOLGA3Q08378 1498 aa19.9■□□□□ 0.78
TRPM4-202ENST00000427978 EIF4G1Q04637 1599 aaKnown RBP19.88■□□□□ 0.77
TRPM4-202ENST00000427978 CLIP1P30622 1438 aa19.86■□□□□ 0.77
TRPM4-202ENST00000427978 MIER1Q8N108 512 aa19.84■□□□□ 0.77
TRPM4-202ENST00000427978 EEA1Q15075 1411 aa19.82■□□□□ 0.76
TRPM4-202ENST00000427978 ATP1B4Q9UN42 357 aaPredicted RBP19.75■□□□□ 0.75
TRPM4-202ENST00000427978 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
TRPM4-202ENST00000427978 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
TRPM4-202ENST00000427978 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
TRPM4-202ENST00000427978 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
TRPM4-202ENST00000427978 SYNJ1O43426 1573 aa19.67■□□□□ 0.74
TRPM4-202ENST00000427978 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
TRPM4-202ENST00000427978 ATAD2BQ9ULI0 1458 aa19.63■□□□□ 0.73
TRPM4-202ENST00000427978 VPS8Q8N3P4 1428 aa19.62■□□□□ 0.73
TRPM4-202ENST00000427978 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
TRPM4-202ENST00000427978 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
TRPM4-202ENST00000427978 FAM50AQ14320 339 aaKnown RBP19.48■□□□□ 0.71
TRPM4-202ENST00000427978 KIF21BO75037 1637 aa19.44■□□□□ 0.7
TRPM4-202ENST00000427978 HIRIP3Q9BW71 556 aaPredicted RBP19.37■□□□□ 0.69
TRPM4-202ENST00000427978 DHX57Q6P158 1386 aaKnown RBP19.35■□□□□ 0.69
TRPM4-202ENST00000427978 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
TRPM4-202ENST00000427978 BCANQ96GW7 911 aa19.3■□□□□ 0.68
TRPM4-202ENST00000427978 ARAP1Q96P48 1450 aa19.3■□□□□ 0.68
TRPM4-202ENST00000427978 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
TRPM4-202ENST00000427978 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
TRPM4-202ENST00000427978 KCNH8Q96L42 1107 aa19.27■□□□□ 0.68
TRPM4-202ENST00000427978 CCNB3Q8WWL7 1395 aa19.27■□□□□ 0.67
TRPM4-202ENST00000427978 DDX10Q13206 875 aaKnown RBP19.26■□□□□ 0.67
TRPM4-202ENST00000427978 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
TRPM4-202ENST00000427978 CUX2O14529 1486 aa19.23■□□□□ 0.67
TRPM4-202ENST00000427978 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
TRPM4-202ENST00000427978 CUX1P39880 1505 aa19.2■□□□□ 0.66
TRPM4-202ENST00000427978 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
TRPM4-202ENST00000427978 CLSPNQ9HAW4 1339 aa19.15■□□□□ 0.66
TRPM4-202ENST00000427978 SUPT16HQ9Y5B9 1047 aaKnown RBP19.14■□□□□ 0.65
TRPM4-202ENST00000427978 CARMIL1Q5VZK9 1371 aa19.14■□□□□ 0.65
TRPM4-202ENST00000427978 MYT1Q01538 1121 aa19.13■□□□□ 0.65
TRPM4-202ENST00000427978 ARHGAP35Q9NRY4 1499 aa19.13■□□□□ 0.65
TRPM4-202ENST00000427978 ARID3CA6NKF2 412 aa19.13■□□□□ 0.65
TRPM4-202ENST00000427978 IGF1RP08069 1367 aa19.1■□□□□ 0.65
TRPM4-202ENST00000427978 TRIM52Q96A61 297 aa19.08■□□□□ 0.65
TRPM4-202ENST00000427978 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
TRPM4-202ENST00000427978 NCAPD3P42695 1498 aa19.07■□□□□ 0.64
TRPM4-202ENST00000427978 RRBP1Q9P2E9 1410 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms