Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC17.48■□□□□ 0.39
NCLP19338 KRT8P22-201ENST00000562317 1415 ntBASIC17.48■□□□□ 0.39
NCLP19338 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.48■□□□□ 0.39
NCLP19338 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NCLP19338 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC17.48■□□□□ 0.39
NCLP19338 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.48■□□□□ 0.39
NCLP19338 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC17.48■□□□□ 0.39
NCLP19338 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.48■□□□□ 0.39
NCLP19338 DFFBP1-201ENST00000433250 979 ntBASIC17.48■□□□□ 0.39
NCLP19338 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.48■□□□□ 0.39
NCLP19338 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.48■□□□□ 0.39
NCLP19338 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NCLP19338 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.48■□□□□ 0.39
NCLP19338 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
NCLP19338 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.48■□□□□ 0.39
NCLP19338 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.48■□□□□ 0.39
NCLP19338 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
NCLP19338 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.48■□□□□ 0.39
NCLP19338 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.48■□□□□ 0.39
NCLP19338 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NCLP19338 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NCLP19338 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NCLP19338 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.48■□□□□ 0.39
NCLP19338 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NCLP19338 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC17.47■□□□□ 0.39
NCLP19338 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
NCLP19338 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.47■□□□□ 0.39
NCLP19338 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.47■□□□□ 0.39
NCLP19338 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NCLP19338 SPDYE19P-201ENST00000338590 713 ntBASIC17.47■□□□□ 0.39
NCLP19338 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 RN7SL692P-201ENST00000464677 288 ntBASIC17.47■□□□□ 0.39
NCLP19338 AC093004.1-201ENST00000508850 424 ntBASIC17.47■□□□□ 0.39
NCLP19338 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.47■□□□□ 0.39
NCLP19338 CR383656.12-201ENST00000549567 513 ntBASIC17.47■□□□□ 0.39
NCLP19338 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
NCLP19338 AC140912.1-201ENST00000577171 1054 ntBASIC17.47■□□□□ 0.39
NCLP19338 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NCLP19338 SRD5A3P1-201ENST00000603021 949 ntBASIC17.47■□□□□ 0.39
NCLP19338 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.47■□□□□ 0.39
NCLP19338 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
NCLP19338 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC17.47■□□□□ 0.39
NCLP19338 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NCLP19338 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NCLP19338 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.47■□□□□ 0.39
NCLP19338 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCLP19338 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC17.46■□□□□ 0.39
NCLP19338 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 INVS-201ENST00000262456 2968 ntTSL 5 BASIC17.46■□□□□ 0.39
NCLP19338 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.46■□□□□ 0.39
NCLP19338 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.46■□□□□ 0.39
NCLP19338 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NCLP19338 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms