Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 MEP1AP4-201ENST00000423244 1087 ntBASIC14.17□□□□□ -0.14
LINGO3P0C6S8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 AC093004.1-201ENST00000508850 424 ntBASIC14.17□□□□□ -0.14
LINGO3P0C6S8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.17□□□□□ -0.14
LINGO3P0C6S8 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 DMBT1P1-203ENST00000636837 4628 ntBASIC14.17□□□□□ -0.14
LINGO3P0C6S8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINGO3P0C6S8 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.16□□□□□ -0.14
LINGO3P0C6S8 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 CLK3P2-201ENST00000427566 1453 ntBASIC14.16□□□□□ -0.14
LINGO3P0C6S8 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LINGO3P0C6S8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINGO3P0C6S8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms