RNA–Protein interactions for RNA: ENST00000325980.9

VENTX-201, Transcript of VENT homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VENTX, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VENTX-201ENST00000325980 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
VENTX-201ENST00000325980 SHROOM4Q9ULL8 1493 aa22.1■■□□□ 1.13
VENTX-201ENST00000325980 HRCP23327 699 aa21.92■■□□□ 1.1
VENTX-201ENST00000325980 PPARGC1BQ86YN6 1023 aaKnown RBP21.9■■□□□ 1.1
VENTX-201ENST00000325980 DCAF8L2P0C7V8 631 aa21.88■■□□□ 1.09
VENTX-201ENST00000325980 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.06
VENTX-201ENST00000325980 PCGF6Q9BYE7 350 aa21.67■■□□□ 1.06
VENTX-201ENST00000325980 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
VENTX-201ENST00000325980 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
VENTX-201ENST00000325980 MYO15BQ96JP2 1530 aa21.22■□□□□ 0.99
VENTX-201ENST00000325980 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
VENTX-201ENST00000325980 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
VENTX-201ENST00000325980 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
VENTX-201ENST00000325980 ABCC9O60706 1549 aa21.01■□□□□ 0.95
VENTX-201ENST00000325980 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
VENTX-201ENST00000325980 DCAF1Q9Y4B6 1507 aa20.85■□□□□ 0.93
VENTX-201ENST00000325980 SCRIBQ14160 1630 aa20.58■□□□□ 0.88
VENTX-201ENST00000325980 TRIM26Q12899 539 aaPredicted RBP20.57■□□□□ 0.88
VENTX-201ENST00000325980 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
VENTX-201ENST00000325980 GTF3C3Q9Y5Q9 886 aa20.32■□□□□ 0.84
VENTX-201ENST00000325980 ACIN1Q9UKV3 1341 aaKnown RBP20.3■□□□□ 0.84
VENTX-201ENST00000325980 EHMT2Q96KQ7 1210 aa20.3■□□□□ 0.84
VENTX-201ENST00000325980 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
VENTX-201ENST00000325980 ZEB1P37275 1124 aaPredicted RBP20.26■□□□□ 0.83
VENTX-201ENST00000325980 NACADO15069 1562 aa20.19■□□□□ 0.82
VENTX-201ENST00000325980 MYT1Q01538 1121 aa20.18■□□□□ 0.82
VENTX-201ENST00000325980 PABPN1Q86U42 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
VENTX-201ENST00000325980 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
VENTX-201ENST00000325980 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.81
VENTX-201ENST00000325980 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
VENTX-201ENST00000325980 TRIM41Q8WV44 630 aa20.04■□□□□ 0.8
VENTX-201ENST00000325980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
VENTX-201ENST00000325980 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
VENTX-201ENST00000325980 YTHDC1Q96MU7 727 aaKnown RBP19.95■□□□□ 0.78
VENTX-201ENST00000325980 DIEXFQ68CQ4 756 aaKnown RBP19.92■□□□□ 0.78
VENTX-201ENST00000325980 CENPBP07199 599 aaPredicted RBP19.9■□□□□ 0.78
VENTX-201ENST00000325980 WIZO95785 1651 aa19.87■□□□□ 0.77
VENTX-201ENST00000325980 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
VENTX-201ENST00000325980 TTBK1Q5TCY1 1321 aaPredicted RBP19.78■□□□□ 0.76
VENTX-201ENST00000325980 UNC13AQ9UPW8 1703 aa19.77■□□□□ 0.76
VENTX-201ENST00000325980 BAZ1AQ9NRL2 1556 aaPredicted RBP19.67■□□□□ 0.74
VENTX-201ENST00000325980 BICRAQ9NZM4 1560 aa19.55■□□□□ 0.72
VENTX-201ENST00000325980 SMARCA4P51532 1647 aa19.53■□□□□ 0.72
VENTX-201ENST00000325980 MIER1Q8N108 512 aa19.49■□□□□ 0.71
VENTX-201ENST00000325980 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
VENTX-201ENST00000325980 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
VENTX-201ENST00000325980 BCL11AQ9H165 835 aa19.44■□□□□ 0.7
VENTX-201ENST00000325980 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
VENTX-201ENST00000325980 SMARCA2P51531 1590 aa19.38■□□□□ 0.69
VENTX-201ENST00000325980 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
VENTX-201ENST00000325980 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
VENTX-201ENST00000325980 SOGA1O94964 1423 aa19.24■□□□□ 0.67
VENTX-201ENST00000325980 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
VENTX-201ENST00000325980 ANP32EQ9BTT0 268 aa19.21■□□□□ 0.67
VENTX-201ENST00000325980 SUPT16HQ9Y5B9 1047 aaKnown RBP19.18■□□□□ 0.66
VENTX-201ENST00000325980 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
VENTX-201ENST00000325980 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
VENTX-201ENST00000325980 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
VENTX-201ENST00000325980 ATAD2BQ9ULI0 1458 aa19.12■□□□□ 0.65
VENTX-201ENST00000325980 BAZ1BQ9UIG0 1483 aaKnown RBP19.1■□□□□ 0.65
VENTX-201ENST00000325980 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.64
VENTX-201ENST00000325980 BCANQ96GW7 911 aa19.07■□□□□ 0.64
VENTX-201ENST00000325980 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
VENTX-201ENST00000325980 PEG3Q9GZU2 1588 aa19.04■□□□□ 0.64
VENTX-201ENST00000325980 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
VENTX-201ENST00000325980 RANGAP1P46060 587 aaPredicted RBP19.01■□□□□ 0.63
VENTX-201ENST00000325980 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
VENTX-201ENST00000325980 TNIKQ9UKE5 1360 aa18.95■□□□□ 0.62
VENTX-201ENST00000325980 EEA1Q15075 1411 aa18.93■□□□□ 0.62
VENTX-201ENST00000325980 GOLGA3Q08378 1498 aa18.89■□□□□ 0.61
VENTX-201ENST00000325980 KCNH8Q96L42 1107 aa18.86■□□□□ 0.61
VENTX-201ENST00000325980 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
VENTX-201ENST00000325980 ITGAEP38570 1179 aa18.76■□□□□ 0.59
VENTX-201ENST00000325980 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
VENTX-201ENST00000325980 PRKCSHP14314 528 aaPredicted RBP18.76■□□□□ 0.59
VENTX-201ENST00000325980 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
VENTX-201ENST00000325980 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
VENTX-201ENST00000325980 CLIP1P30622 1438 aa18.73■□□□□ 0.59
VENTX-201ENST00000325980 FKBP8Q14318 412 aa18.73■□□□□ 0.59
VENTX-201ENST00000325980 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
VENTX-201ENST00000325980 RBM19Q9Y4C8 960 aaKnown RBP18.7■□□□□ 0.58
VENTX-201ENST00000325980 APLP2Q06481 763 aa18.68■□□□□ 0.58
VENTX-201ENST00000325980 KIF21BO75037 1637 aa18.67■□□□□ 0.58
VENTX-201ENST00000325980 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
VENTX-201ENST00000325980 HMGXB3Q12766 1538 aa18.64■□□□□ 0.57
VENTX-201ENST00000325980 MSH5O43196 834 aa18.63■□□□□ 0.57
VENTX-201ENST00000325980 CUX1P39880 1505 aa18.59■□□□□ 0.57
VENTX-201ENST00000325980 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
VENTX-201ENST00000325980 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
VENTX-201ENST00000325980 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
VENTX-201ENST00000325980 CFTRP13569 1480 aa18.54■□□□□ 0.56
VENTX-201ENST00000325980 NESP48681 1621 aa18.52■□□□□ 0.55
VENTX-201ENST00000325980 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
VENTX-201ENST00000325980 TRIM52Q96A61 297 aa18.48■□□□□ 0.55
VENTX-201ENST00000325980 PRXQ9BXM0 1461 aa18.47■□□□□ 0.55
VENTX-201ENST00000325980 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
VENTX-201ENST00000325980 KANK4Q5T7N3 995 aaPredicted RBP18.42■□□□□ 0.54
VENTX-201ENST00000325980 IRX6P78412 446 aaPredicted RBP18.42■□□□□ 0.54
VENTX-201ENST00000325980 CUX2O14529 1486 aa18.41■□□□□ 0.54
VENTX-201ENST00000325980 ANO8Q9HCE9 1232 aaPredicted RBP18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms