RNA–Protein interactions for RNA: ENST00000535358.5

C1orf228-219, Transcript of Uncharacterized protein C1orf228, humanhuman

APPRIS P2 TSL 5 BASIC

Gene C1orf228, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-219ENST00000535358 NISCHQ9Y2I1 1504 aa35.48■■■■□ 3.27
C1orf228-219ENST00000535358 CCDC180Q9P1Z9 1646 aa30.96■■■□□ 2.55
C1orf228-219ENST00000535358 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
C1orf228-219ENST00000535358 ABCC9O60706 1549 aa29.45■■■□□ 2.31
C1orf228-219ENST00000535358 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
C1orf228-219ENST00000535358 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
C1orf228-219ENST00000535358 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
C1orf228-219ENST00000535358 SHROOM4Q9ULL8 1493 aa28.92■■■□□ 2.22
C1orf228-219ENST00000535358 NACADO15069 1562 aa28.86■■■□□ 2.21
C1orf228-219ENST00000535358 RB1CC1Q8TDY2 1594 aa28.64■■■□□ 2.18
C1orf228-219ENST00000535358 SCRIBQ14160 1630 aa28.52■■■□□ 2.16
C1orf228-219ENST00000535358 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.11
C1orf228-219ENST00000535358 BICRAQ9NZM4 1560 aa27.87■■■□□ 2.05
C1orf228-219ENST00000535358 PABPN1Q86U42 306 aaKnown RBP eCLIP27.78■■■□□ 2.04
C1orf228-219ENST00000535358 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
C1orf228-219ENST00000535358 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.02
C1orf228-219ENST00000535358 RSF1Q96T23 1441 aaPredicted RBP27.49■■□□□ 1.99
C1orf228-219ENST00000535358 MROH2BQ7Z745 1585 aa27.45■■□□□ 1.98
C1orf228-219ENST00000535358 BAZ1AQ9NRL2 1556 aaPredicted RBP27.37■■□□□ 1.97
C1orf228-219ENST00000535358 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
C1orf228-219ENST00000535358 WIZO95785 1651 aa27.24■■□□□ 1.95
C1orf228-219ENST00000535358 EIF4G1Q04637 1599 aaKnown RBP27■■□□□ 1.91
C1orf228-219ENST00000535358 PEG3Q9GZU2 1588 aa26.95■■□□□ 1.91
C1orf228-219ENST00000535358 ATAD2BQ9ULI0 1458 aa26.89■■□□□ 1.89
C1orf228-219ENST00000535358 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
C1orf228-219ENST00000535358 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
C1orf228-219ENST00000535358 BAZ1BQ9UIG0 1483 aaKnown RBP26.7■■□□□ 1.86
C1orf228-219ENST00000535358 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
C1orf228-219ENST00000535358 CCDC88BA6NC98 1476 aa26.65■■□□□ 1.86
C1orf228-219ENST00000535358 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
C1orf228-219ENST00000535358 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
C1orf228-219ENST00000535358 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
C1orf228-219ENST00000535358 DNAJC5BQ9UF47 199 aa26.17■■□□□ 1.78
C1orf228-219ENST00000535358 ABCC8Q09428 1581 aa26.08■■□□□ 1.77
C1orf228-219ENST00000535358 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
C1orf228-219ENST00000535358 CFTRP13569 1480 aa26.04■■□□□ 1.76
C1orf228-219ENST00000535358 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
C1orf228-219ENST00000535358 PRDM2Q13029 1718 aa25.94■■□□□ 1.74
C1orf228-219ENST00000535358 NESP48681 1621 aa25.85■■□□□ 1.73
C1orf228-219ENST00000535358 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
C1orf228-219ENST00000535358 SYNJ1O43426 1573 aa25.81■■□□□ 1.72
C1orf228-219ENST00000535358 LAMC3Q9Y6N6 1575 aa25.75■■□□□ 1.71
C1orf228-219ENST00000535358 FANCD2Q9BXW9 1451 aa25.69■■□□□ 1.7
C1orf228-219ENST00000535358 TOP2BQ02880 1626 aa25.68■■□□□ 1.7
C1orf228-219ENST00000535358 CUX1P39880 1505 aa25.67■■□□□ 1.7
C1orf228-219ENST00000535358 BIVM-ERCC5R4GMW8 1640 aa25.66■■□□□ 1.7
C1orf228-219ENST00000535358 FAM9AQ8IZU1 332 aaPredicted RBP25.64■■□□□ 1.69
C1orf228-219ENST00000535358 SOGA1O94964 1423 aa25.55■■□□□ 1.68
C1orf228-219ENST00000535358 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
C1orf228-219ENST00000535358 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
C1orf228-219ENST00000535358 LOC105371045A0A1W2PR82 267 aa25.54■■□□□ 1.68
C1orf228-219ENST00000535358 CEP164Q9UPV0 1460 aa25.51■■□□□ 1.67
C1orf228-219ENST00000535358 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
C1orf228-219ENST00000535358 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
C1orf228-219ENST00000535358 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
C1orf228-219ENST00000535358 TOPBP1Q92547 1522 aa25.41■■□□□ 1.66
C1orf228-219ENST00000535358 FGD5Q6ZNL6 1462 aa25.38■■□□□ 1.65
C1orf228-219ENST00000535358 EEA1Q15075 1411 aa25.35■■□□□ 1.65
C1orf228-219ENST00000535358 EHMT2Q96KQ7 1210 aa25.32■■□□□ 1.64
C1orf228-219ENST00000535358 CSRNP3Q8WYN3 585 aa25.3■■□□□ 1.64
C1orf228-219ENST00000535358 POLA1P09884 1462 aaPredicted RBP25.27■■□□□ 1.64
C1orf228-219ENST00000535358 MRC2Q9UBG0 1479 aa25.24■■□□□ 1.63
C1orf228-219ENST00000535358 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
C1orf228-219ENST00000535358 ERCC6Q03468 1493 aa25.2■■□□□ 1.62
C1orf228-219ENST00000535358 CUX2O14529 1486 aa25.18■■□□□ 1.62
C1orf228-219ENST00000535358 KIF27Q86VH2 1401 aa25.18■■□□□ 1.62
C1orf228-219ENST00000535358 ABCA10Q8WWZ4 1543 aa25.13■■□□□ 1.61
C1orf228-219ENST00000535358 WDR62O43379 1518 aa25.13■■□□□ 1.61
C1orf228-219ENST00000535358 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
C1orf228-219ENST00000535358 WDR97A6NE52 1622 aa25.11■■□□□ 1.61
C1orf228-219ENST00000535358 KIF21BO75037 1637 aa25.1■■□□□ 1.61
C1orf228-219ENST00000535358 TARBP1Q13395 1621 aaKnown RBP25.06■■□□□ 1.6
C1orf228-219ENST00000535358 GOLGA3Q08378 1498 aa25.04■■□□□ 1.6
C1orf228-219ENST00000535358 IGF1RP08069 1367 aa25.03■■□□□ 1.6
C1orf228-219ENST00000535358 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
C1orf228-219ENST00000535358 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
C1orf228-219ENST00000535358 TDRD9Q8NDG6 1382 aaKnown RBP24.98■■□□□ 1.59
C1orf228-219ENST00000535358 UBTFP17480 764 aaKnown RBP24.97■■□□□ 1.59
C1orf228-219ENST00000535358 ABCA5Q8WWZ7 1642 aa24.96■■□□□ 1.59
C1orf228-219ENST00000535358 TNIKQ9UKE5 1360 aa24.95■■□□□ 1.58
C1orf228-219ENST00000535358 ERICH3Q5RHP9 1530 aa24.93■■□□□ 1.58
C1orf228-219ENST00000535358 IFT140Q96RY7 1462 aa24.9■■□□□ 1.58
C1orf228-219ENST00000535358 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
C1orf228-219ENST00000535358 CARMIL1Q5VZK9 1371 aa24.88■■□□□ 1.57
C1orf228-219ENST00000535358 AQRO60306 1485 aaKnown RBP eCLIP24.85■■□□□ 1.57
C1orf228-219ENST00000535358 ZNF608Q9ULD9 1512 aaPredicted RBP24.85■■□□□ 1.57
C1orf228-219ENST00000535358 CEP162Q5TB80 1403 aa24.82■■□□□ 1.56
C1orf228-219ENST00000535358 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
C1orf228-219ENST00000535358 CUL7Q14999 1698 aa24.8■■□□□ 1.56
C1orf228-219ENST00000535358 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
C1orf228-219ENST00000535358 GRIN2BQ13224 1484 aa24.7■■□□□ 1.54
C1orf228-219ENST00000535358 RANGAP1P46060 587 aaPredicted RBP24.66■■□□□ 1.54
C1orf228-219ENST00000535358 CLIP1P30622 1438 aa24.65■■□□□ 1.54
C1orf228-219ENST00000535358 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
C1orf228-219ENST00000535358 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
C1orf228-219ENST00000535358 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.53
C1orf228-219ENST00000535358 CTTNBP2Q8WZ74 1663 aa24.56■■□□□ 1.52
C1orf228-219ENST00000535358 MAGI1Q96QZ7 1491 aaPredicted RBP24.49■■□□□ 1.51
C1orf228-219ENST00000535358 ARHGAP35Q9NRY4 1499 aa24.48■■□□□ 1.51
C1orf228-219ENST00000535358 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms