Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN1P35523 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN1P35523 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.65■□□□□ 0.26
CLCN1P35523 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLCN1P35523 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.65■□□□□ 0.26
CLCN1P35523 AC004890.2-204ENST00000481968 304 ntBASIC16.65■□□□□ 0.26
CLCN1P35523 IGHV3-42-201ENST00000520410 361 ntBASIC16.65■□□□□ 0.26
CLCN1P35523 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLCN1P35523 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.65■□□□□ 0.26
CLCN1P35523 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN1P35523 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CLCN1P35523 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLCN1P35523 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLCN1P35523 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CLCN1P35523 AGAP12P-201ENST00000585227 2359 ntBASIC16.65■□□□□ 0.26
CLCN1P35523 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN1P35523 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN1P35523 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCN1P35523 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN1P35523 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CLCN1P35523 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CLCN1P35523 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCN1P35523 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCN1P35523 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN1P35523 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN1P35523 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN1P35523 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CLCN1P35523 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN1P35523 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLCN1P35523 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN1P35523 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.64■□□□□ 0.25
CLCN1P35523 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.64■□□□□ 0.25
CLCN1P35523 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN1P35523 AC092183.1-201ENST00000469884 875 ntBASIC16.64■□□□□ 0.25
CLCN1P35523 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCN1P35523 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.64■□□□□ 0.25
CLCN1P35523 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CLCN1P35523 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 ACTG1P22-201ENST00000603793 1099 ntBASIC16.64■□□□□ 0.25
CLCN1P35523 AL390754.1-201ENST00000619088 582 ntBASIC16.64■□□□□ 0.25
CLCN1P35523 AC004840.1-201ENST00000636359 365 ntBASIC16.64■□□□□ 0.25
CLCN1P35523 PAX6-247ENST00000638965 979 ntTSL 5 BASIC16.64■□□□□ 0.25
CLCN1P35523 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.64■□□□□ 0.25
CLCN1P35523 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLCN1P35523 AC018445.4-201ENST00000624066 2291 ntBASIC16.64■□□□□ 0.25
CLCN1P35523 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN1P35523 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLCN1P35523 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLCN1P35523 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLCN1P35523 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN1P35523 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN1P35523 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC16.63■□□□□ 0.25
CLCN1P35523 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLCN1P35523 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.63■□□□□ 0.25
CLCN1P35523 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CLCN1P35523 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLCN1P35523 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN1P35523 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CLCN1P35523 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLCN1P35523 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.63■□□□□ 0.25
CLCN1P35523 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN1P35523 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLCN1P35523 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.63■□□□□ 0.25
CLCN1P35523 AC092337.1-201ENST00000568699 1129 ntBASIC16.63■□□□□ 0.25
CLCN1P35523 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.63■□□□□ 0.25
CLCN1P35523 AC008738.7-201ENST00000609744 511 ntBASIC16.63■□□□□ 0.25
CLCN1P35523 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms