Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.58■□□□□ 0.08
HOXC8P31273 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.58■□□□□ 0.08
HOXC8P31273 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.57■□□□□ 0.08
HOXC8P31273 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.57■□□□□ 0.08
HOXC8P31273 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HOXC8P31273 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.57■□□□□ 0.08
HOXC8P31273 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HOXC8P31273 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HOXC8P31273 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HOXC8P31273 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.57■□□□□ 0.08
HOXC8P31273 RPL3P2-204ENST00000413027 1203 ntBASIC15.57■□□□□ 0.08
HOXC8P31273 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.57■□□□□ 0.08
HOXC8P31273 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.57■□□□□ 0.08
HOXC8P31273 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.57■□□□□ 0.08
HOXC8P31273 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
HOXC8P31273 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.57■□□□□ 0.08
HOXC8P31273 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.57■□□□□ 0.08
HOXC8P31273 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HOXC8P31273 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.57■□□□□ 0.08
HOXC8P31273 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HOXC8P31273 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HOXC8P31273 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HOXC8P31273 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HOXC8P31273 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HOXC8P31273 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.56■□□□□ 0.08
HOXC8P31273 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HOXC8P31273 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HOXC8P31273 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HOXC8P31273 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HOXC8P31273 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HOXC8P31273 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.56■□□□□ 0.08
HOXC8P31273 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.56■□□□□ 0.08
HOXC8P31273 RN7SL375P-201ENST00000492442 298 ntBASIC15.56■□□□□ 0.08
HOXC8P31273 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.56■□□□□ 0.08
HOXC8P31273 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.56■□□□□ 0.08
HOXC8P31273 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HOXC8P31273 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.56■□□□□ 0.08
HOXC8P31273 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.56■□□□□ 0.08
HOXC8P31273 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.56■□□□□ 0.08
HOXC8P31273 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HOXC8P31273 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.56■□□□□ 0.08
HOXC8P31273 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.56■□□□□ 0.08
HOXC8P31273 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.56■□□□□ 0.08
HOXC8P31273 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.56■□□□□ 0.08
HOXC8P31273 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.56■□□□□ 0.08
HOXC8P31273 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HOXC8P31273 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.56■□□□□ 0.08
HOXC8P31273 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.56■□□□□ 0.08
HOXC8P31273 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
HOXC8P31273 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HOXC8P31273 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
HOXC8P31273 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HOXC8P31273 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HOXC8P31273 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HOXC8P31273 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
HOXC8P31273 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
HOXC8P31273 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.55■□□□□ 0.08
HOXC8P31273 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HOXC8P31273 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HOXC8P31273 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.55■□□□□ 0.08
HOXC8P31273 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HOXC8P31273 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HOXC8P31273 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.55■□□□□ 0.08
HOXC8P31273 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HOXC8P31273 MIR1227-201ENST00000408484 88 ntBASIC15.55■□□□□ 0.08
HOXC8P31273 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.55■□□□□ 0.08
HOXC8P31273 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HOXC8P31273 AL139008.1-201ENST00000437894 228 ntBASIC15.55■□□□□ 0.08
HOXC8P31273 STK24P1-201ENST00000455035 1291 ntBASIC15.55■□□□□ 0.08
HOXC8P31273 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HOXC8P31273 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms