Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RTTNQ86VV8 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
RTTNQ86VV8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13□□□□□ -0.33
RTTNQ86VV8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13□□□□□ -0.33
RTTNQ86VV8 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RTTNQ86VV8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13□□□□□ -0.33
RTTNQ86VV8 KHSRPP1-201ENST00000427983 1768 ntBASIC13□□□□□ -0.33
RTTNQ86VV8 CICP4-201ENST00000447359 2812 ntBASIC13□□□□□ -0.33
RTTNQ86VV8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13□□□□□ -0.33
RTTNQ86VV8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13□□□□□ -0.33
RTTNQ86VV8 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 C2orf27AP3-201ENST00000434123 579 ntBASIC13□□□□□ -0.33
RTTNQ86VV8 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13□□□□□ -0.33
RTTNQ86VV8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RTTNQ86VV8 AL354718.3-201ENST00000616414 581 ntBASIC13□□□□□ -0.33
RTTNQ86VV8 AC132938.4-201ENST00000623835 848 ntBASIC13□□□□□ -0.33
RTTNQ86VV8 CR382287.1-201ENST00000623954 586 ntBASIC13□□□□□ -0.33
RTTNQ86VV8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RTTNQ86VV8 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13□□□□□ -0.33
RTTNQ86VV8 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13□□□□□ -0.33
RTTNQ86VV8 AL354702.1-201ENST00000442006 1960 ntBASIC13□□□□□ -0.33
RTTNQ86VV8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13□□□□□ -0.33
RTTNQ86VV8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 LINC02486-201ENST00000604157 3000 ntBASIC12.99□□□□□ -0.33
RTTNQ86VV8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 AL928921.2-201ENST00000641325 2442 ntBASIC12.99□□□□□ -0.33
RTTNQ86VV8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 AL136309.1-201ENST00000403917 691 ntBASIC12.99□□□□□ -0.33
RTTNQ86VV8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 AKR7A2P1-201ENST00000460134 915 ntBASIC12.99□□□□□ -0.33
RTTNQ86VV8 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 AC091271.1-201ENST00000611877 1162 ntBASIC12.99□□□□□ -0.33
RTTNQ86VV8 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTTNQ86VV8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
RTTNQ86VV8 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 RN7SKP175-201ENST00000408472 289 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 AC005077.2-201ENST00000449786 690 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 DUX4L45-201ENST00000566406 1057 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 MIR3619-201ENST00000579667 83 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 AP001002.3-201ENST00000623482 206 ntBASIC12.98□□□□□ -0.33
RTTNQ86VV8 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTTNQ86VV8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RTTNQ86VV8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms