RNA–Protein interactions for RNA: ENST00000519560.5

SLIT3-206, Transcript of slit guidance ligand 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLIT3, Length 9,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-206ENST00000519560 DCAF8L2P0C7V8 631 aa22.78■■□□□ 1.24
SLIT3-206ENST00000519560 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
SLIT3-206ENST00000519560 NISCHQ9Y2I1 1504 aa22.19■■□□□ 1.14
SLIT3-206ENST00000519560 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
SLIT3-206ENST00000519560 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
SLIT3-206ENST00000519560 CCER1Q8TC90 406 aaPredicted RBP21.45■■□□□ 1.02
SLIT3-206ENST00000519560 APLP2Q06481 763 aa21.41■■□□□ 1.02
SLIT3-206ENST00000519560 EHMT2Q96KQ7 1210 aa21.39■■□□□ 1.01
SLIT3-206ENST00000519560 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
SLIT3-206ENST00000519560 MYT1Q01538 1121 aa21.19■□□□□ 0.98
SLIT3-206ENST00000519560 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
SLIT3-206ENST00000519560 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.96
SLIT3-206ENST00000519560 NEFLP07196 543 aa20.87■□□□□ 0.93
SLIT3-206ENST00000519560 TTBK1Q5TCY1 1321 aaPredicted RBP20.82■□□□□ 0.92
SLIT3-206ENST00000519560 ZEB1P37275 1124 aaPredicted RBP20.81■□□□□ 0.92
SLIT3-206ENST00000519560 PCGF6Q9BYE7 350 aa20.81■□□□□ 0.92
SLIT3-206ENST00000519560 DAXXQ9UER7 740 aaPredicted RBP20.55■□□□□ 0.88
SLIT3-206ENST00000519560 YTHDC1Q96MU7 727 aaKnown RBP20.51■□□□□ 0.87
SLIT3-206ENST00000519560 RANGAP1P46060 587 aaPredicted RBP20.41■□□□□ 0.86
SLIT3-206ENST00000519560 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
SLIT3-206ENST00000519560 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
SLIT3-206ENST00000519560 UBTFP17480 764 aaKnown RBP20.14■□□□□ 0.81
SLIT3-206ENST00000519560 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
SLIT3-206ENST00000519560 ZNF316A6NFI3 1004 aaPredicted RBP20.04■□□□□ 0.8
SLIT3-206ENST00000519560 POLR3GLQ9BT43 218 aa19.87■□□□□ 0.77
SLIT3-206ENST00000519560 CLSPNQ9HAW4 1339 aa19.81■□□□□ 0.76
SLIT3-206ENST00000519560 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.75
SLIT3-206ENST00000519560 MYT1LQ9UL68 1186 aa19.71■□□□□ 0.75
SLIT3-206ENST00000519560 HRCP23327 699 aa19.7■□□□□ 0.74
SLIT3-206ENST00000519560 PPARGC1BQ86YN6 1023 aaKnown RBP19.7■□□□□ 0.74
SLIT3-206ENST00000519560 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
SLIT3-206ENST00000519560 ITGAEP38570 1179 aa19.6■□□□□ 0.73
SLIT3-206ENST00000519560 CNGB1Q14028 1251 aaPredicted RBP19.6■□□□□ 0.73
SLIT3-206ENST00000519560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
SLIT3-206ENST00000519560 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
SLIT3-206ENST00000519560 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
SLIT3-206ENST00000519560 ZBTB47Q9UFB7 747 aaPredicted RBP19.41■□□□□ 0.7
SLIT3-206ENST00000519560 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.7
SLIT3-206ENST00000519560 CDK11AQ9UQ88 783 aaPredicted RBP19.31■□□□□ 0.68
SLIT3-206ENST00000519560 BCANQ96GW7 911 aa19.21■□□□□ 0.67
SLIT3-206ENST00000519560 CANXP27824 592 aaKnown RBP19.19■□□□□ 0.66
SLIT3-206ENST00000519560 ANP32AP39687 249 aaKnown RBP19.15■□□□□ 0.66
SLIT3-206ENST00000519560 ANP32BQ92688 251 aaKnown RBP19.15■□□□□ 0.66
SLIT3-206ENST00000519560 GLIPR1L2Q4G1C9 344 aa19.13■□□□□ 0.65
SLIT3-206ENST00000519560 ANP32CO43423 234 aa19.12■□□□□ 0.65
SLIT3-206ENST00000519560 GTF3C3Q9Y5Q9 886 aa19.1■□□□□ 0.65
SLIT3-206ENST00000519560 EIF5BO60841 1220 aaKnown RBP19.07■□□□□ 0.64
SLIT3-206ENST00000519560 FAM50AQ14320 339 aaKnown RBP19.06■□□□□ 0.64
SLIT3-206ENST00000519560 BCL11AQ9H165 835 aa19.05■□□□□ 0.64
SLIT3-206ENST00000519560 SLC24A1O60721 1099 aa19.04■□□□□ 0.64
SLIT3-206ENST00000519560 TRIM52Q96A61 297 aa19.02■□□□□ 0.64
SLIT3-206ENST00000519560 NEFMP07197 916 aa18.99■□□□□ 0.63
SLIT3-206ENST00000519560 LOC105371045A0A1W2PR82 267 aa18.99■□□□□ 0.63
SLIT3-206ENST00000519560 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
SLIT3-206ENST00000519560 ZNF326Q5BKZ1 582 aaKnown RBP18.96■□□□□ 0.63
SLIT3-206ENST00000519560 HSP90AA1P07900 732 aaKnown RBP18.95■□□□□ 0.62
SLIT3-206ENST00000519560 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
SLIT3-206ENST00000519560 UPF2Q9HAU5 1272 aaKnown RBP18.83■□□□□ 0.61
SLIT3-206ENST00000519560 CCDC180Q9P1Z9 1646 aa18.81■□□□□ 0.6
SLIT3-206ENST00000519560 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
SLIT3-206ENST00000519560 ACIN1Q9UKV3 1341 aaKnown RBP18.67■□□□□ 0.58
SLIT3-206ENST00000519560 CDK11BP21127 795 aaKnown RBP18.62■□□□□ 0.57
SLIT3-206ENST00000519560 NBR1Q14596 966 aa18.57■□□□□ 0.56
SLIT3-206ENST00000519560 ARXQ96QS3 562 aa18.55■□□□□ 0.56
SLIT3-206ENST00000519560 FKBP8Q14318 412 aa18.53■□□□□ 0.56
SLIT3-206ENST00000519560 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
SLIT3-206ENST00000519560 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.49■□□□□ 0.55
SLIT3-206ENST00000519560 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
SLIT3-206ENST00000519560 CCDC136Q96JN2 1154 aa18.42■□□□□ 0.54
SLIT3-206ENST00000519560 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
SLIT3-206ENST00000519560 TONSLQ96HA7 1378 aa18.39■□□□□ 0.53
SLIT3-206ENST00000519560 MYH16Q9H6N6 1097 aa18.38■□□□□ 0.53
SLIT3-206ENST00000519560 TRIM44Q96DX7 344 aaPredicted RBP18.38■□□□□ 0.53
SLIT3-206ENST00000519560 FBLN2P98095 1184 aa18.34■□□□□ 0.53
SLIT3-206ENST00000519560 ESF1Q9H501 851 aaKnown RBP18.33■□□□□ 0.52
SLIT3-206ENST00000519560 ANP32EQ9BTT0 268 aa18.33■□□□□ 0.52
SLIT3-206ENST00000519560 BECN1Q14457 450 aa18.32■□□□□ 0.52
SLIT3-206ENST00000519560 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
SLIT3-206ENST00000519560 NCLP19338 710 aaKnown RBP18.31■□□□□ 0.52
SLIT3-206ENST00000519560 GOLGA6L22H0YM25 854 aa18.28■□□□□ 0.52
SLIT3-206ENST00000519560 DDRGK1Q96HY6 314 aa18.27■□□□□ 0.52
SLIT3-206ENST00000519560 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.51
SLIT3-206ENST00000519560 ZNF777Q9ULD5 760 aaPredicted RBP18.26■□□□□ 0.51
SLIT3-206ENST00000519560 WDR43Q15061 677 aaKnown RBP eCLIP18.25■□□□□ 0.51
SLIT3-206ENST00000519560 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
SLIT3-206ENST00000519560 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
SLIT3-206ENST00000519560 PTMAP06454 111 aaKnown RBP18.21■□□□□ 0.51
SLIT3-206ENST00000519560 SALL2Q9Y467 1007 aaPredicted RBP18.21■□□□□ 0.51
SLIT3-206ENST00000519560 ARID3CA6NKF2 412 aa18.21■□□□□ 0.51
SLIT3-206ENST00000519560 DNTTIP2Q5QJE6 756 aaKnown RBP18.18■□□□□ 0.5
SLIT3-206ENST00000519560 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
SLIT3-206ENST00000519560 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
SLIT3-206ENST00000519560 DDX10Q13206 875 aaKnown RBP18.14■□□□□ 0.49
SLIT3-206ENST00000519560 EEA1Q15075 1411 aa18.13■□□□□ 0.49
SLIT3-206ENST00000519560 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
SLIT3-206ENST00000519560 P3H3Q8IVL6 736 aa18.12■□□□□ 0.49
SLIT3-206ENST00000519560 CASC1Q6TDU7 716 aa18.11■□□□□ 0.49
SLIT3-206ENST00000519560 ERICH6BQ5W0A0 696 aa18.11■□□□□ 0.49
SLIT3-206ENST00000519560 MRS2Q9HD23 443 aa18.1■□□□□ 0.49
SLIT3-206ENST00000519560 NAP1L5Q96NT1 182 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms