RNA–Protein interactions for RNA: ENST00000408472.1

RN7SKP175-201, Transcript of RNA, 7SK small nuclear pseudogene 175, humanhuman

BASIC

Gene RN7SKP175, Length 289 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP175-201ENST00000408472 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
RN7SKP175-201ENST00000408472 CCDC180Q9P1Z9 1646 aa31.7■■■□□ 2.66
RN7SKP175-201ENST00000408472 ABCC9O60706 1549 aa30.45■■■□□ 2.47
RN7SKP175-201ENST00000408472 ZCCHC6Q5VYS8 1495 aaKnown RBP29.88■■■□□ 2.37
RN7SKP175-201ENST00000408472 DCAF1Q9Y4B6 1507 aa29.62■■■□□ 2.33
RN7SKP175-201ENST00000408472 NACADO15069 1562 aa29.6■■■□□ 2.33
RN7SKP175-201ENST00000408472 MYO15BQ96JP2 1530 aa29.59■■■□□ 2.33
RN7SKP175-201ENST00000408472 RB1CC1Q8TDY2 1594 aa29.55■■■□□ 2.32
RN7SKP175-201ENST00000408472 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
RN7SKP175-201ENST00000408472 UNC13AQ9UPW8 1703 aa29.02■■■□□ 2.24
RN7SKP175-201ENST00000408472 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
RN7SKP175-201ENST00000408472 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
RN7SKP175-201ENST00000408472 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
RN7SKP175-201ENST00000408472 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
RN7SKP175-201ENST00000408472 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
RN7SKP175-201ENST00000408472 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.03
RN7SKP175-201ENST00000408472 SMARCA4P51532 1647 aa27.69■■■□□ 2.02
RN7SKP175-201ENST00000408472 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
RN7SKP175-201ENST00000408472 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
RN7SKP175-201ENST00000408472 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
RN7SKP175-201ENST00000408472 DNAJC5BQ9UF47 199 aa27.5■■□□□ 1.99
RN7SKP175-201ENST00000408472 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
RN7SKP175-201ENST00000408472 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
RN7SKP175-201ENST00000408472 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
RN7SKP175-201ENST00000408472 RSF1Q96T23 1441 aaPredicted RBP27.34■■□□□ 1.97
RN7SKP175-201ENST00000408472 WIZO95785 1651 aa27.31■■□□□ 1.96
RN7SKP175-201ENST00000408472 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
RN7SKP175-201ENST00000408472 HMGXB3Q12766 1538 aa27.25■■□□□ 1.95
RN7SKP175-201ENST00000408472 BAZ1BQ9UIG0 1483 aaKnown RBP27.16■■□□□ 1.94
RN7SKP175-201ENST00000408472 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
RN7SKP175-201ENST00000408472 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
RN7SKP175-201ENST00000408472 CCDC88BA6NC98 1476 aa26.66■■□□□ 1.86
RN7SKP175-201ENST00000408472 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
RN7SKP175-201ENST00000408472 NESP48681 1621 aa26.5■■□□□ 1.83
RN7SKP175-201ENST00000408472 PRDM2Q13029 1718 aa26.47■■□□□ 1.83
RN7SKP175-201ENST00000408472 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
RN7SKP175-201ENST00000408472 CFTRP13569 1480 aa26.44■■□□□ 1.82
RN7SKP175-201ENST00000408472 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
RN7SKP175-201ENST00000408472 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
RN7SKP175-201ENST00000408472 ERCC6Q03468 1493 aa26.19■■□□□ 1.78
RN7SKP175-201ENST00000408472 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
RN7SKP175-201ENST00000408472 CEP164Q9UPV0 1460 aa26.14■■□□□ 1.78
RN7SKP175-201ENST00000408472 THOC2Q8NI27 1593 aaKnown RBP26.1■■□□□ 1.77
RN7SKP175-201ENST00000408472 MRC2Q9UBG0 1479 aa26.02■■□□□ 1.76
RN7SKP175-201ENST00000408472 WDR62O43379 1518 aa25.96■■□□□ 1.75
RN7SKP175-201ENST00000408472 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
RN7SKP175-201ENST00000408472 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
RN7SKP175-201ENST00000408472 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
RN7SKP175-201ENST00000408472 TOPBP1Q92547 1522 aa25.85■■□□□ 1.73
RN7SKP175-201ENST00000408472 CUX1P39880 1505 aa25.83■■□□□ 1.72
RN7SKP175-201ENST00000408472 CUX2O14529 1486 aa25.81■■□□□ 1.72
RN7SKP175-201ENST00000408472 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
RN7SKP175-201ENST00000408472 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
RN7SKP175-201ENST00000408472 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
RN7SKP175-201ENST00000408472 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
RN7SKP175-201ENST00000408472 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
RN7SKP175-201ENST00000408472 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
RN7SKP175-201ENST00000408472 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
RN7SKP175-201ENST00000408472 IFT140Q96RY7 1462 aa25.56■■□□□ 1.68
RN7SKP175-201ENST00000408472 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
RN7SKP175-201ENST00000408472 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
RN7SKP175-201ENST00000408472 SOGA1O94964 1423 aa25.5■■□□□ 1.67
RN7SKP175-201ENST00000408472 ABCA10Q8WWZ4 1543 aa25.43■■□□□ 1.66
RN7SKP175-201ENST00000408472 EIF4G3O43432 1585 aaKnown RBP25.41■■□□□ 1.66
RN7SKP175-201ENST00000408472 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
RN7SKP175-201ENST00000408472 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
RN7SKP175-201ENST00000408472 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
RN7SKP175-201ENST00000408472 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
RN7SKP175-201ENST00000408472 PBRM1Q86U86 1689 aa25.3■■□□□ 1.64
RN7SKP175-201ENST00000408472 AQRO60306 1485 aaKnown RBP eCLIP25.29■■□□□ 1.64
RN7SKP175-201ENST00000408472 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
RN7SKP175-201ENST00000408472 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
RN7SKP175-201ENST00000408472 KIF27Q86VH2 1401 aa25.19■■□□□ 1.62
RN7SKP175-201ENST00000408472 GRIN2BQ13224 1484 aa25.18■■□□□ 1.62
RN7SKP175-201ENST00000408472 ERICH3Q5RHP9 1530 aa25.16■■□□□ 1.62
RN7SKP175-201ENST00000408472 RUSC2Q8N2Y8 1516 aa25.11■■□□□ 1.61
RN7SKP175-201ENST00000408472 SNAPC4Q5SXM2 1469 aa25.1■■□□□ 1.61
RN7SKP175-201ENST00000408472 MAGI1Q96QZ7 1491 aaPredicted RBP25.1■■□□□ 1.61
RN7SKP175-201ENST00000408472 ADAMTS12P58397 1594 aa25.08■■□□□ 1.61
RN7SKP175-201ENST00000408472 CUL7Q14999 1698 aa25.06■■□□□ 1.6
RN7SKP175-201ENST00000408472 CHD1O14646 1710 aa25.05■■□□□ 1.6
RN7SKP175-201ENST00000408472 EEA1Q15075 1411 aa25.01■■□□□ 1.59
RN7SKP175-201ENST00000408472 IGF1RP08069 1367 aa25■■□□□ 1.59
RN7SKP175-201ENST00000408472 SYNJ2O15056 1496 aa24.98■■□□□ 1.59
RN7SKP175-201ENST00000408472 FHAD1B1AJZ9 1412 aa24.96■■□□□ 1.59
RN7SKP175-201ENST00000408472 GRIN2AQ12879 1464 aa24.89■■□□□ 1.57
RN7SKP175-201ENST00000408472 CARMIL1Q5VZK9 1371 aa24.87■■□□□ 1.57
RN7SKP175-201ENST00000408472 PRXQ9BXM0 1461 aa24.84■■□□□ 1.57
RN7SKP175-201ENST00000408472 CHMP7Q8WUX9 453 aaPredicted RBP24.83■■□□□ 1.57
RN7SKP175-201ENST00000408472 CSRNP3Q8WYN3 585 aa24.83■■□□□ 1.57
RN7SKP175-201ENST00000408472 FBLN2P98095 1184 aa24.81■■□□□ 1.56
RN7SKP175-201ENST00000408472 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
RN7SKP175-201ENST00000408472 RAPGEF2Q9Y4G8 1499 aa24.81■■□□□ 1.56
RN7SKP175-201ENST00000408472 KIF21BO75037 1637 aa24.8■■□□□ 1.56
RN7SKP175-201ENST00000408472 CEP170Q5SW79 1584 aa24.78■■□□□ 1.56
RN7SKP175-201ENST00000408472 NUP160Q12769 1436 aa24.76■■□□□ 1.55
RN7SKP175-201ENST00000408472 CLASP1Q7Z460 1538 aa24.74■■□□□ 1.55
RN7SKP175-201ENST00000408472 CTTNBP2Q8WZ74 1663 aa24.7■■□□□ 1.54
RN7SKP175-201ENST00000408472 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
RN7SKP175-201ENST00000408472 GOLGA3Q08378 1498 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms