RNA–Protein interactions for RNA: ENST00000408472.1

RN7SKP175-201, Transcript of RNA, 7SK small nuclear pseudogene 175, humanhuman

BASIC

Gene RN7SKP175, Length 289 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP175-201ENST00000408472 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
RN7SKP175-201ENST00000408472 CCDC180Q9P1Z9 1646 aa31.7■■■□□ 2.66
RN7SKP175-201ENST00000408472 ABCC9O60706 1549 aa30.45■■■□□ 2.47
RN7SKP175-201ENST00000408472 ZCCHC6Q5VYS8 1495 aaKnown RBP29.88■■■□□ 2.37
RN7SKP175-201ENST00000408472 DCAF1Q9Y4B6 1507 aa29.62■■■□□ 2.33
RN7SKP175-201ENST00000408472 NACADO15069 1562 aa29.6■■■□□ 2.33
RN7SKP175-201ENST00000408472 MYO15BQ96JP2 1530 aa29.59■■■□□ 2.33
RN7SKP175-201ENST00000408472 RB1CC1Q8TDY2 1594 aa29.55■■■□□ 2.32
RN7SKP175-201ENST00000408472 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
RN7SKP175-201ENST00000408472 UNC13AQ9UPW8 1703 aa29.02■■■□□ 2.24
RN7SKP175-201ENST00000408472 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
RN7SKP175-201ENST00000408472 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
RN7SKP175-201ENST00000408472 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
RN7SKP175-201ENST00000408472 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
RN7SKP175-201ENST00000408472 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
RN7SKP175-201ENST00000408472 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.03
RN7SKP175-201ENST00000408472 SMARCA4P51532 1647 aa27.69■■■□□ 2.02
RN7SKP175-201ENST00000408472 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
RN7SKP175-201ENST00000408472 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
RN7SKP175-201ENST00000408472 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
RN7SKP175-201ENST00000408472 DNAJC5BQ9UF47 199 aa27.5■■□□□ 1.99
RN7SKP175-201ENST00000408472 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
RN7SKP175-201ENST00000408472 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
RN7SKP175-201ENST00000408472 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
RN7SKP175-201ENST00000408472 RSF1Q96T23 1441 aaPredicted RBP27.34■■□□□ 1.97
RN7SKP175-201ENST00000408472 WIZO95785 1651 aa27.31■■□□□ 1.96
RN7SKP175-201ENST00000408472 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
RN7SKP175-201ENST00000408472 HMGXB3Q12766 1538 aa27.25■■□□□ 1.95
RN7SKP175-201ENST00000408472 BAZ1BQ9UIG0 1483 aaKnown RBP27.16■■□□□ 1.94
RN7SKP175-201ENST00000408472 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
RN7SKP175-201ENST00000408472 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
RN7SKP175-201ENST00000408472 CCDC88BA6NC98 1476 aa26.66■■□□□ 1.86
RN7SKP175-201ENST00000408472 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
RN7SKP175-201ENST00000408472 NESP48681 1621 aa26.5■■□□□ 1.83
RN7SKP175-201ENST00000408472 PRDM2Q13029 1718 aa26.47■■□□□ 1.83
RN7SKP175-201ENST00000408472 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
RN7SKP175-201ENST00000408472 CFTRP13569 1480 aa26.44■■□□□ 1.82
RN7SKP175-201ENST00000408472 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
RN7SKP175-201ENST00000408472 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
RN7SKP175-201ENST00000408472 ERCC6Q03468 1493 aa26.19■■□□□ 1.78
RN7SKP175-201ENST00000408472 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
RN7SKP175-201ENST00000408472 CEP164Q9UPV0 1460 aa26.14■■□□□ 1.78
RN7SKP175-201ENST00000408472 THOC2Q8NI27 1593 aaKnown RBP26.1■■□□□ 1.77
RN7SKP175-201ENST00000408472 MRC2Q9UBG0 1479 aa26.02■■□□□ 1.76
RN7SKP175-201ENST00000408472 WDR62O43379 1518 aa25.96■■□□□ 1.75
RN7SKP175-201ENST00000408472 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
RN7SKP175-201ENST00000408472 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
RN7SKP175-201ENST00000408472 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
RN7SKP175-201ENST00000408472 TOPBP1Q92547 1522 aa25.85■■□□□ 1.73
RN7SKP175-201ENST00000408472 CUX1P39880 1505 aa25.83■■□□□ 1.72
RN7SKP175-201ENST00000408472 CUX2O14529 1486 aa25.81■■□□□ 1.72
RN7SKP175-201ENST00000408472 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
RN7SKP175-201ENST00000408472 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
RN7SKP175-201ENST00000408472 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
RN7SKP175-201ENST00000408472 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
RN7SKP175-201ENST00000408472 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
RN7SKP175-201ENST00000408472 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
RN7SKP175-201ENST00000408472 TARBP1Q13395 1621 aaKnown RBP25.59■■□□□ 1.69
RN7SKP175-201ENST00000408472 IFT140Q96RY7 1462 aa25.56■■□□□ 1.68
RN7SKP175-201ENST00000408472 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
RN7SKP175-201ENST00000408472 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
RN7SKP175-201ENST00000408472 SOGA1O94964 1423 aa25.5■■□□□ 1.67
RN7SKP175-201ENST00000408472 ABCA10Q8WWZ4 1543 aa25.43■■□□□ 1.66
RN7SKP175-201ENST00000408472 EIF4G3O43432 1585 aaKnown RBP25.41■■□□□ 1.66
RN7SKP175-201ENST00000408472 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
RN7SKP175-201ENST00000408472 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
RN7SKP175-201ENST00000408472 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
RN7SKP175-201ENST00000408472 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
RN7SKP175-201ENST00000408472 PBRM1Q86U86 1689 aa25.3■■□□□ 1.64
RN7SKP175-201ENST00000408472 AQRO60306 1485 aaKnown RBP eCLIP25.29■■□□□ 1.64
RN7SKP175-201ENST00000408472 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
RN7SKP175-201ENST00000408472 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
RN7SKP175-201ENST00000408472 KIF27Q86VH2 1401 aa25.19■■□□□ 1.62
RN7SKP175-201ENST00000408472 GRIN2BQ13224 1484 aa25.18■■□□□ 1.62
RN7SKP175-201ENST00000408472 ERICH3Q5RHP9 1530 aa25.16■■□□□ 1.62
RN7SKP175-201ENST00000408472 RUSC2Q8N2Y8 1516 aa25.11■■□□□ 1.61
RN7SKP175-201ENST00000408472 SNAPC4Q5SXM2 1469 aa25.1■■□□□ 1.61
RN7SKP175-201ENST00000408472 MAGI1Q96QZ7 1491 aaPredicted RBP25.1■■□□□ 1.61
RN7SKP175-201ENST00000408472 ADAMTS12P58397 1594 aa25.08■■□□□ 1.61
RN7SKP175-201ENST00000408472 CUL7Q14999 1698 aa25.06■■□□□ 1.6
RN7SKP175-201ENST00000408472 CHD1O14646 1710 aa25.05■■□□□ 1.6
RN7SKP175-201ENST00000408472 EEA1Q15075 1411 aa25.01■■□□□ 1.59
RN7SKP175-201ENST00000408472 IGF1RP08069 1367 aa25■■□□□ 1.59
RN7SKP175-201ENST00000408472 SYNJ2O15056 1496 aa24.98■■□□□ 1.59
RN7SKP175-201ENST00000408472 FHAD1B1AJZ9 1412 aa24.96■■□□□ 1.59
RN7SKP175-201ENST00000408472 GRIN2AQ12879 1464 aa24.89■■□□□ 1.57
RN7SKP175-201ENST00000408472 CARMIL1Q5VZK9 1371 aa24.87■■□□□ 1.57
RN7SKP175-201ENST00000408472 PRXQ9BXM0 1461 aa24.84■■□□□ 1.57
RN7SKP175-201ENST00000408472 CHMP7Q8WUX9 453 aaPredicted RBP24.83■■□□□ 1.57
RN7SKP175-201ENST00000408472 CSRNP3Q8WYN3 585 aa24.83■■□□□ 1.57
RN7SKP175-201ENST00000408472 FBLN2P98095 1184 aa24.81■■□□□ 1.56
RN7SKP175-201ENST00000408472 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
RN7SKP175-201ENST00000408472 RAPGEF2Q9Y4G8 1499 aa24.81■■□□□ 1.56
RN7SKP175-201ENST00000408472 KIF21BO75037 1637 aa24.8■■□□□ 1.56
RN7SKP175-201ENST00000408472 CEP170Q5SW79 1584 aa24.78■■□□□ 1.56
RN7SKP175-201ENST00000408472 NUP160Q12769 1436 aa24.76■■□□□ 1.55
RN7SKP175-201ENST00000408472 CLASP1Q7Z460 1538 aa24.74■■□□□ 1.55
RN7SKP175-201ENST00000408472 CTTNBP2Q8WZ74 1663 aa24.7■■□□□ 1.54
RN7SKP175-201ENST00000408472 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
RN7SKP175-201ENST00000408472 GOLGA3Q08378 1498 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms