Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
USH2AO75445 AC092115.1-201ENST00000566277 1402 ntBASIC6.28□□□□□ -1.4
USH2AO75445 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USH2AO75445 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USH2AO75445 AC096677.3-201ENST00000413162 387 ntBASIC6.28□□□□□ -1.4
USH2AO75445 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC6.28□□□□□ -1.4
USH2AO75445 NME6-211ENST00000447314 621 ntTSL 3 BASIC6.28□□□□□ -1.4
USH2AO75445 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC6.28□□□□□ -1.4
USH2AO75445 RN7SL47P-201ENST00000488710 299 ntBASIC6.28□□□□□ -1.4
USH2AO75445 SRPK2P-201ENST00000523408 1100 ntBASIC6.28□□□□□ -1.4
USH2AO75445 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
USH2AO75445 TLE2-205ENST00000586422 389 ntTSL 5 BASIC6.28□□□□□ -1.4
USH2AO75445 AL049840.2-201ENST00000602722 535 ntBASIC6.28□□□□□ -1.4
USH2AO75445 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC6.28□□□□□ -1.4
USH2AO75445 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USH2AO75445 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
USH2AO75445 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
USH2AO75445 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
USH2AO75445 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
USH2AO75445 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USH2AO75445 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
USH2AO75445 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
USH2AO75445 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
USH2AO75445 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 RBMX2P5-201ENST00000424312 969 ntBASIC6.27□□□□□ -1.41
USH2AO75445 GAS5-209ENST00000430245 723 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 AC253536.1-201ENST00000437021 315 ntBASIC6.27□□□□□ -1.41
USH2AO75445 SRP9P1-201ENST00000445874 261 ntBASIC6.27□□□□□ -1.41
USH2AO75445 IGHV7-56-201ENST00000518372 351 ntBASIC6.27□□□□□ -1.41
USH2AO75445 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC6.27□□□□□ -1.41
USH2AO75445 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 AC002350.2-201ENST00000623894 1828 ntBASIC6.27□□□□□ -1.41
USH2AO75445 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 KHSRPP1-201ENST00000427983 1768 ntBASIC6.27□□□□□ -1.41
USH2AO75445 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
USH2AO75445 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 AC024909.3-201ENST00000611513 2257 ntBASIC6.27□□□□□ -1.41
USH2AO75445 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
USH2AO75445 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 HDGF-202ENST00000368206 960 ntTSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 RBP4-203ENST00000371469 814 ntTSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 MIR766-201ENST00000390223 111 ntBASIC6.27□□□□□ -1.41
USH2AO75445 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 ST13P19-201ENST00000442505 1124 ntBASIC6.27□□□□□ -1.41
USH2AO75445 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 RN7SL684P-201ENST00000465665 294 ntBASIC6.27□□□□□ -1.41
USH2AO75445 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC6.27□□□□□ -1.41
USH2AO75445 SNORD3B-1-201ENST00000577988 758 ntBASIC6.27□□□□□ -1.41
USH2AO75445 AL078624.1-201ENST00000604004 547 ntBASIC6.27□□□□□ -1.41
USH2AO75445 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
USH2AO75445 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 ALOX12P1-201ENST00000579299 1229 ntBASIC6.27□□□□□ -1.41
USH2AO75445 AC112702.1-201ENST00000623712 366 ntBASIC6.27□□□□□ -1.41
USH2AO75445 MVK-217ENST00000639206 367 ntTSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms