RNA–Protein interactions for RNA: ENST00000488710.3

RN7SL47P-201, Transcript of RNA, 7SL, cytoplasmic 47, pseudogene, humanhuman

BASIC

Gene RN7SL47P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL47P-201ENST00000488710 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
RN7SL47P-201ENST00000488710 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
RN7SL47P-201ENST00000488710 ABCC9O60706 1549 aa27.74■■■□□ 2.03
RN7SL47P-201ENST00000488710 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
RN7SL47P-201ENST00000488710 NACADO15069 1562 aa26.5■■□□□ 1.83
RN7SL47P-201ENST00000488710 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
RN7SL47P-201ENST00000488710 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
RN7SL47P-201ENST00000488710 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
RN7SL47P-201ENST00000488710 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
RN7SL47P-201ENST00000488710 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
RN7SL47P-201ENST00000488710 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
RN7SL47P-201ENST00000488710 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
RN7SL47P-201ENST00000488710 BICRAQ9NZM4 1560 aa25.8■■□□□ 1.72
RN7SL47P-201ENST00000488710 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
RN7SL47P-201ENST00000488710 SCRIBQ14160 1630 aa25.47■■□□□ 1.67
RN7SL47P-201ENST00000488710 EIF4G1Q04637 1599 aaKnown RBP25.13■■□□□ 1.61
RN7SL47P-201ENST00000488710 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
RN7SL47P-201ENST00000488710 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
RN7SL47P-201ENST00000488710 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
RN7SL47P-201ENST00000488710 ATAD2BQ9ULI0 1458 aa24.44■■□□□ 1.5
RN7SL47P-201ENST00000488710 SMARCA4P51532 1647 aa24.4■■□□□ 1.5
RN7SL47P-201ENST00000488710 BAZ1AQ9NRL2 1556 aaPredicted RBP24.36■■□□□ 1.49
RN7SL47P-201ENST00000488710 SMARCA2P51531 1590 aa24.35■■□□□ 1.49
RN7SL47P-201ENST00000488710 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
RN7SL47P-201ENST00000488710 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
RN7SL47P-201ENST00000488710 MROH2BQ7Z745 1585 aa24.19■■□□□ 1.46
RN7SL47P-201ENST00000488710 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
RN7SL47P-201ENST00000488710 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
RN7SL47P-201ENST00000488710 NESP48681 1621 aa23.92■■□□□ 1.42
RN7SL47P-201ENST00000488710 CUX2O14529 1486 aa23.88■■□□□ 1.41
RN7SL47P-201ENST00000488710 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
RN7SL47P-201ENST00000488710 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
RN7SL47P-201ENST00000488710 WIZO95785 1651 aa23.83■■□□□ 1.41
RN7SL47P-201ENST00000488710 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
RN7SL47P-201ENST00000488710 PDS5BQ9NTI5 1447 aa23.74■■□□□ 1.39
RN7SL47P-201ENST00000488710 DNAJC5Q9H3Z4 198 aa23.63■■□□□ 1.37
RN7SL47P-201ENST00000488710 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
RN7SL47P-201ENST00000488710 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
RN7SL47P-201ENST00000488710 CFTRP13569 1480 aa23.56■■□□□ 1.36
RN7SL47P-201ENST00000488710 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
RN7SL47P-201ENST00000488710 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
RN7SL47P-201ENST00000488710 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
RN7SL47P-201ENST00000488710 WDR62O43379 1518 aa23.41■■□□□ 1.34
RN7SL47P-201ENST00000488710 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
RN7SL47P-201ENST00000488710 CCDC88BA6NC98 1476 aa23.38■■□□□ 1.33
RN7SL47P-201ENST00000488710 URB2Q14146 1524 aaKnown RBP23.22■■□□□ 1.31
RN7SL47P-201ENST00000488710 PRDM2Q13029 1718 aa23.14■■□□□ 1.3
RN7SL47P-201ENST00000488710 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
RN7SL47P-201ENST00000488710 TOPBP1Q92547 1522 aa23.02■■□□□ 1.28
RN7SL47P-201ENST00000488710 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
RN7SL47P-201ENST00000488710 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
RN7SL47P-201ENST00000488710 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
RN7SL47P-201ENST00000488710 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
RN7SL47P-201ENST00000488710 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
RN7SL47P-201ENST00000488710 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
RN7SL47P-201ENST00000488710 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
RN7SL47P-201ENST00000488710 SOGA1O94964 1423 aa22.73■■□□□ 1.23
RN7SL47P-201ENST00000488710 AQRO60306 1485 aaKnown RBP eCLIP22.72■■□□□ 1.23
RN7SL47P-201ENST00000488710 CUX1P39880 1505 aa22.71■■□□□ 1.23
RN7SL47P-201ENST00000488710 EIF4G3O43432 1585 aaKnown RBP22.7■■□□□ 1.22
RN7SL47P-201ENST00000488710 RAD54L2Q9Y4B4 1467 aa22.69■■□□□ 1.22
RN7SL47P-201ENST00000488710 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
RN7SL47P-201ENST00000488710 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
RN7SL47P-201ENST00000488710 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
RN7SL47P-201ENST00000488710 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
RN7SL47P-201ENST00000488710 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
RN7SL47P-201ENST00000488710 ABCA10Q8WWZ4 1543 aa22.49■■□□□ 1.19
RN7SL47P-201ENST00000488710 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
RN7SL47P-201ENST00000488710 FBLN2P98095 1184 aa22.47■■□□□ 1.19
RN7SL47P-201ENST00000488710 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
RN7SL47P-201ENST00000488710 SNAPC4Q5SXM2 1469 aa22.46■■□□□ 1.19
RN7SL47P-201ENST00000488710 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
RN7SL47P-201ENST00000488710 ARHGEF11O15085 1522 aa22.42■■□□□ 1.18
RN7SL47P-201ENST00000488710 CHD1O14646 1710 aa22.42■■□□□ 1.18
RN7SL47P-201ENST00000488710 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
RN7SL47P-201ENST00000488710 CHMP7Q8WUX9 453 aaPredicted RBP22.41■■□□□ 1.18
RN7SL47P-201ENST00000488710 RIMBP3CA6NJZ7 1639 aa22.41■■□□□ 1.18
RN7SL47P-201ENST00000488710 RIMBP3BA6NNM3 1639 aa22.41■■□□□ 1.18
RN7SL47P-201ENST00000488710 RIMBP3Q9UFD9 1639 aa22.41■■□□□ 1.18
RN7SL47P-201ENST00000488710 SYNJ2O15056 1496 aa22.39■■□□□ 1.17
RN7SL47P-201ENST00000488710 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
RN7SL47P-201ENST00000488710 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
RN7SL47P-201ENST00000488710 SYNJ1O43426 1573 aa22.35■■□□□ 1.17
RN7SL47P-201ENST00000488710 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
RN7SL47P-201ENST00000488710 PBRM1Q86U86 1689 aa22.27■■□□□ 1.16
RN7SL47P-201ENST00000488710 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
RN7SL47P-201ENST00000488710 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
RN7SL47P-201ENST00000488710 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
RN7SL47P-201ENST00000488710 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
RN7SL47P-201ENST00000488710 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
RN7SL47P-201ENST00000488710 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
RN7SL47P-201ENST00000488710 NUP160Q12769 1436 aa22.15■■□□□ 1.14
RN7SL47P-201ENST00000488710 CEP170Q5SW79 1584 aa22.05■■□□□ 1.12
RN7SL47P-201ENST00000488710 IGF1RP08069 1367 aa22.04■■□□□ 1.12
RN7SL47P-201ENST00000488710 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
RN7SL47P-201ENST00000488710 SHROOM2Q13796 1616 aa21.96■■□□□ 1.11
RN7SL47P-201ENST00000488710 JPH4Q96JJ6 628 aa21.94■■□□□ 1.1
RN7SL47P-201ENST00000488710 ERCC6L2Q5T890 1561 aa21.92■■□□□ 1.1
RN7SL47P-201ENST00000488710 PRG4Q92954 1404 aaPredicted RBP21.88■■□□□ 1.09
RN7SL47P-201ENST00000488710 TRHP20396 242 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms