RNA–Protein interactions for RNA: ENST00000614349.4

SDHD-214, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDHD, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-214ENST00000614349 NISCHQ9Y2I1 1504 aa31.28■■■□□ 2.6
SDHD-214ENST00000614349 ABCC9O60706 1549 aa27.97■■■□□ 2.07
SDHD-214ENST00000614349 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
SDHD-214ENST00000614349 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
SDHD-214ENST00000614349 NACADO15069 1562 aa26.41■■□□□ 1.82
SDHD-214ENST00000614349 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
SDHD-214ENST00000614349 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
SDHD-214ENST00000614349 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
SDHD-214ENST00000614349 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
SDHD-214ENST00000614349 MYO15BQ96JP2 1530 aa26.05■■□□□ 1.76
SDHD-214ENST00000614349 BICRAQ9NZM4 1560 aa25.93■■□□□ 1.74
SDHD-214ENST00000614349 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
SDHD-214ENST00000614349 DCAF1Q9Y4B6 1507 aa25.77■■□□□ 1.72
SDHD-214ENST00000614349 SCRIBQ14160 1630 aa25.56■■□□□ 1.68
SDHD-214ENST00000614349 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
SDHD-214ENST00000614349 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
SDHD-214ENST00000614349 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
SDHD-214ENST00000614349 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
SDHD-214ENST00000614349 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
SDHD-214ENST00000614349 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
SDHD-214ENST00000614349 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
SDHD-214ENST00000614349 SMARCA2P51531 1590 aa24.24■■□□□ 1.47
SDHD-214ENST00000614349 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.47
SDHD-214ENST00000614349 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
SDHD-214ENST00000614349 MROH2BQ7Z745 1585 aa24.16■■□□□ 1.46
SDHD-214ENST00000614349 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
SDHD-214ENST00000614349 NESP48681 1621 aa24.11■■□□□ 1.45
SDHD-214ENST00000614349 BAZ1BQ9UIG0 1483 aaKnown RBP24.1■■□□□ 1.45
SDHD-214ENST00000614349 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
SDHD-214ENST00000614349 CUX2O14529 1486 aa23.96■■□□□ 1.43
SDHD-214ENST00000614349 DNAJC5Q9H3Z4 198 aa23.96■■□□□ 1.43
SDHD-214ENST00000614349 WIZO95785 1651 aa23.88■■□□□ 1.41
SDHD-214ENST00000614349 LAMC3Q9Y6N6 1575 aa23.81■■□□□ 1.4
SDHD-214ENST00000614349 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
SDHD-214ENST00000614349 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
SDHD-214ENST00000614349 CADPSQ9ULU8 1353 aa23.68■■□□□ 1.38
SDHD-214ENST00000614349 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
SDHD-214ENST00000614349 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
SDHD-214ENST00000614349 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
SDHD-214ENST00000614349 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
SDHD-214ENST00000614349 WDR62O43379 1518 aa23.44■■□□□ 1.34
SDHD-214ENST00000614349 CFTRP13569 1480 aa23.43■■□□□ 1.34
SDHD-214ENST00000614349 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
SDHD-214ENST00000614349 CEP164Q9UPV0 1460 aa23.39■■□□□ 1.34
SDHD-214ENST00000614349 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
SDHD-214ENST00000614349 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
SDHD-214ENST00000614349 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
SDHD-214ENST00000614349 TOPBP1Q92547 1522 aa23■■□□□ 1.27
SDHD-214ENST00000614349 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
SDHD-214ENST00000614349 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
SDHD-214ENST00000614349 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
SDHD-214ENST00000614349 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
SDHD-214ENST00000614349 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
SDHD-214ENST00000614349 ABCC8Q09428 1581 aa22.84■■□□□ 1.25
SDHD-214ENST00000614349 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
SDHD-214ENST00000614349 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
SDHD-214ENST00000614349 AQRO60306 1485 aaKnown RBP eCLIP22.79■■□□□ 1.247e-7■■□□□ 14.1
SDHD-214ENST00000614349 POLA1P09884 1462 aaPredicted RBP22.77■■□□□ 1.24
SDHD-214ENST00000614349 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
SDHD-214ENST00000614349 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
SDHD-214ENST00000614349 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
SDHD-214ENST00000614349 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
SDHD-214ENST00000614349 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
SDHD-214ENST00000614349 CUX1P39880 1505 aa22.67■■□□□ 1.22
SDHD-214ENST00000614349 SOGA1O94964 1423 aa22.65■■□□□ 1.22
SDHD-214ENST00000614349 CHD1O14646 1710 aa22.65■■□□□ 1.22
SDHD-214ENST00000614349 TDRD9Q8NDG6 1382 aaKnown RBP22.64■■□□□ 1.22
SDHD-214ENST00000614349 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
SDHD-214ENST00000614349 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
SDHD-214ENST00000614349 FBLN2P98095 1184 aa22.55■■□□□ 1.2
SDHD-214ENST00000614349 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
SDHD-214ENST00000614349 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
SDHD-214ENST00000614349 CYB5RLQ6IPT4 315 aa22.44■■□□□ 1.18
SDHD-214ENST00000614349 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
SDHD-214ENST00000614349 ARAP1Q96P48 1450 aa22.41■■□□□ 1.18
SDHD-214ENST00000614349 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
SDHD-214ENST00000614349 PBRM1Q86U86 1689 aa22.38■■□□□ 1.17
SDHD-214ENST00000614349 CLASP1Q7Z460 1538 aa22.37■■□□□ 1.17
SDHD-214ENST00000614349 GAPVD1Q14C86 1478 aa22.37■■□□□ 1.17
SDHD-214ENST00000614349 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
SDHD-214ENST00000614349 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
SDHD-214ENST00000614349 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
SDHD-214ENST00000614349 SYNJ2O15056 1496 aa22.33■■□□□ 1.16
SDHD-214ENST00000614349 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
SDHD-214ENST00000614349 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
SDHD-214ENST00000614349 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
SDHD-214ENST00000614349 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
SDHD-214ENST00000614349 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
SDHD-214ENST00000614349 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
SDHD-214ENST00000614349 ERCC6L2Q5T890 1561 aa22.13■■□□□ 1.13
SDHD-214ENST00000614349 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
SDHD-214ENST00000614349 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
SDHD-214ENST00000614349 NUP160Q12769 1436 aa22.08■■□□□ 1.13
SDHD-214ENST00000614349 FHAD1B1AJZ9 1412 aa22.07■■□□□ 1.12
SDHD-214ENST00000614349 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
SDHD-214ENST00000614349 SHROOM2Q13796 1616 aa21.99■■□□□ 1.11
SDHD-214ENST00000614349 IGF1RP08069 1367 aa21.88■■□□□ 1.09
SDHD-214ENST00000614349 JPH4Q96JJ6 628 aa21.87■■□□□ 1.09
SDHD-214ENST00000614349 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
SDHD-214ENST00000614349 RUSC2Q8N2Y8 1516 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms