Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 RN7SKP175-201ENST00000408472 289 ntBASIC14.87□□□□□ -0.03
CCDC78A2IDD5 FAM8A4P-201ENST00000435433 1213 ntBASIC14.87□□□□□ -0.03
CCDC78A2IDD5 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 RNA5SP486-201ENST00000515961 83 ntBASIC14.87□□□□□ -0.03
CCDC78A2IDD5 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 RN7SL832P-201ENST00000607781 1756 ntBASIC14.87□□□□□ -0.03
CCDC78A2IDD5 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCDC78A2IDD5 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 MIR1202-201ENST00000408529 83 ntBASIC14.86□□□□□ -0.03
CCDC78A2IDD5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC78A2IDD5 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC78A2IDD5 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC78A2IDD5 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC78A2IDD5 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC78A2IDD5 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC78A2IDD5 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC78A2IDD5 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC78A2IDD5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC78A2IDD5 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC78A2IDD5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms