RNA–Protein interactions for RNA: ENST00000303562.8

FOS-201, Transcript of Fos proto-oncogene, AP-1 transcription factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOS, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOS-201ENST00000303562 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
FOS-201ENST00000303562 CCDC180Q9P1Z9 1646 aa30.33■■■□□ 2.45
FOS-201ENST00000303562 ABCC9O60706 1549 aa29.33■■■□□ 2.29
FOS-201ENST00000303562 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
FOS-201ENST00000303562 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
FOS-201ENST00000303562 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
FOS-201ENST00000303562 NACADO15069 1562 aa28.41■■■□□ 2.14
FOS-201ENST00000303562 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
FOS-201ENST00000303562 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
FOS-201ENST00000303562 SHROOM4Q9ULL8 1493 aa27.97■■■□□ 2.07
FOS-201ENST00000303562 SCRIBQ14160 1630 aa27.93■■■□□ 2.06
FOS-201ENST00000303562 UNC13AQ9UPW8 1703 aa27.76■■■□□ 2.04
FOS-201ENST00000303562 PABPN1Q86U42 306 aaKnown RBP eCLIP27.62■■■□□ 2.01
FOS-201ENST00000303562 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
FOS-201ENST00000303562 CECR2Q9BXF3 1484 aa27.01■■□□□ 1.91
FOS-201ENST00000303562 MROH2BQ7Z745 1585 aa26.76■■□□□ 1.87
FOS-201ENST00000303562 EIF4G1Q04637 1599 aaKnown RBP26.73■■□□□ 1.87
FOS-201ENST00000303562 BAZ1AQ9NRL2 1556 aaPredicted RBP26.72■■□□□ 1.87
FOS-201ENST00000303562 SMARCA4P51532 1647 aa26.7■■□□□ 1.86
FOS-201ENST00000303562 RSF1Q96T23 1441 aaPredicted RBP26.67■■□□□ 1.86
FOS-201ENST00000303562 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
FOS-201ENST00000303562 WIZO95785 1651 aa26.5■■□□□ 1.83
FOS-201ENST00000303562 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
FOS-201ENST00000303562 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
FOS-201ENST00000303562 ATAD2BQ9ULI0 1458 aa26.43■■□□□ 1.82
FOS-201ENST00000303562 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
FOS-201ENST00000303562 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
FOS-201ENST00000303562 NCAPD3P42695 1498 aa26.27■■□□□ 1.8
FOS-201ENST00000303562 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
FOS-201ENST00000303562 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
FOS-201ENST00000303562 HMGXB3Q12766 1538 aa26.14■■□□□ 1.77
FOS-201ENST00000303562 CCDC88BA6NC98 1476 aa25.93■■□□□ 1.74
FOS-201ENST00000303562 NESP48681 1621 aa25.6■■□□□ 1.69
FOS-201ENST00000303562 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
FOS-201ENST00000303562 CFTRP13569 1480 aa25.54■■□□□ 1.68
FOS-201ENST00000303562 LAMC3Q9Y6N6 1575 aa25.42■■□□□ 1.66
FOS-201ENST00000303562 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
FOS-201ENST00000303562 FANCD2Q9BXW9 1451 aa25.29■■□□□ 1.64
FOS-201ENST00000303562 PDS5BQ9NTI5 1447 aa25.27■■□□□ 1.64
FOS-201ENST00000303562 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
FOS-201ENST00000303562 KIF21AQ7Z4S6 1674 aa25.22■■□□□ 1.63
FOS-201ENST00000303562 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
FOS-201ENST00000303562 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
FOS-201ENST00000303562 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
FOS-201ENST00000303562 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
FOS-201ENST00000303562 CUX1P39880 1505 aa25.03■■□□□ 1.6
FOS-201ENST00000303562 URB2Q14146 1524 aaKnown RBP25.03■■□□□ 1.6
FOS-201ENST00000303562 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
FOS-201ENST00000303562 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
FOS-201ENST00000303562 MRC2Q9UBG0 1479 aa24.98■■□□□ 1.59
FOS-201ENST00000303562 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
FOS-201ENST00000303562 THOC2Q8NI27 1593 aaKnown RBP24.93■■□□□ 1.58
FOS-201ENST00000303562 DNMBPQ6XZF7 1577 aa24.92■■□□□ 1.58
FOS-201ENST00000303562 TOP2BQ02880 1626 aa24.92■■□□□ 1.58
FOS-201ENST00000303562 BIVM-ERCC5R4GMW8 1640 aa24.88■■□□□ 1.57
FOS-201ENST00000303562 WDR62O43379 1518 aa24.86■■□□□ 1.57
FOS-201ENST00000303562 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
FOS-201ENST00000303562 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
FOS-201ENST00000303562 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
FOS-201ENST00000303562 CUX2O14529 1486 aa24.73■■□□□ 1.55
FOS-201ENST00000303562 SOGA1O94964 1423 aa24.72■■□□□ 1.55
FOS-201ENST00000303562 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
FOS-201ENST00000303562 FAM9AQ8IZU1 332 aaPredicted RBP24.63■■□□□ 1.53
FOS-201ENST00000303562 TARBP1Q13395 1621 aaKnown RBP24.62■■□□□ 1.53
FOS-201ENST00000303562 TDRD9Q8NDG6 1382 aaKnown RBP24.59■■□□□ 1.53
FOS-201ENST00000303562 IFT140Q96RY7 1462 aa24.58■■□□□ 1.53
FOS-201ENST00000303562 ABCA10Q8WWZ4 1543 aa24.57■■□□□ 1.52
FOS-201ENST00000303562 ZNF608Q9ULD9 1512 aaPredicted RBP24.56■■□□□ 1.52
FOS-201ENST00000303562 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
FOS-201ENST00000303562 AQRO60306 1485 aaKnown RBP eCLIP24.52■■□□□ 1.521e-6■■■■□ 26.1
FOS-201ENST00000303562 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
FOS-201ENST00000303562 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
FOS-201ENST00000303562 ABCA5Q8WWZ7 1642 aa24.41■■□□□ 1.5
FOS-201ENST00000303562 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
FOS-201ENST00000303562 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.5
FOS-201ENST00000303562 IGF1RP08069 1367 aa24.38■■□□□ 1.49
FOS-201ENST00000303562 EHMT2Q96KQ7 1210 aa24.37■■□□□ 1.49
FOS-201ENST00000303562 EEA1Q15075 1411 aa24.35■■□□□ 1.49
FOS-201ENST00000303562 GRIN2BQ13224 1484 aa24.3■■□□□ 1.48
FOS-201ENST00000303562 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
FOS-201ENST00000303562 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
FOS-201ENST00000303562 ERICH3Q5RHP9 1530 aa24.26■■□□□ 1.47
FOS-201ENST00000303562 CARMIL1Q5VZK9 1371 aa24.23■■□□□ 1.47
FOS-201ENST00000303562 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
FOS-201ENST00000303562 PRXQ9BXM0 1461 aa24.2■■□□□ 1.46
FOS-201ENST00000303562 RAPGEF2Q9Y4G8 1499 aa24.17■■□□□ 1.46
FOS-201ENST00000303562 FBLN2P98095 1184 aa24.15■■□□□ 1.46
FOS-201ENST00000303562 ADAMTS12P58397 1594 aa24.13■■□□□ 1.45
FOS-201ENST00000303562 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
FOS-201ENST00000303562 FHAD1B1AJZ9 1412 aa24.13■■□□□ 1.45
FOS-201ENST00000303562 CUL7Q14999 1698 aa24.13■■□□□ 1.45
FOS-201ENST00000303562 CHMP7Q8WUX9 453 aaPredicted RBP24.09■■□□□ 1.45
FOS-201ENST00000303562 KIF21BO75037 1637 aa24.09■■□□□ 1.45
FOS-201ENST00000303562 SYNJ2O15056 1496 aa24.06■■□□□ 1.44
FOS-201ENST00000303562 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
FOS-201ENST00000303562 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
FOS-201ENST00000303562 GRIN2AQ12879 1464 aa24.01■■□□□ 1.43
FOS-201ENST00000303562 CHD1O14646 1710 aa23.98■■□□□ 1.43
FOS-201ENST00000303562 RANGAP1P46060 587 aaPredicted RBP23.92■■□□□ 1.42
FOS-201ENST00000303562 CEP170Q5SW79 1584 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms