Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PGBD4Q96DM1 CICP24-201ENST00000605464 2705 ntBASIC15.81■□□□□ 0.12
PGBD4Q96DM1 AC097376.2-205ENST00000610159 5334 ntBASIC15.81■□□□□ 0.12
PGBD4Q96DM1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 AL109837.1-201ENST00000603272 613 ntBASIC15.8■□□□□ 0.12
PGBD4Q96DM1 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 AC018442.1-201ENST00000421439 2061 ntBASIC15.8■□□□□ 0.12
PGBD4Q96DM1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PGBD4Q96DM1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 AC007326.2-201ENST00000624224 7579 ntBASIC15.79■□□□□ 0.12
PGBD4Q96DM1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 AC106881.1-201ENST00000605849 3329 ntBASIC15.79■□□□□ 0.12
PGBD4Q96DM1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 AL627231.1-201ENST00000394467 1125 ntBASIC15.79■□□□□ 0.12
PGBD4Q96DM1 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 RN7SL67P-201ENST00000492147 296 ntBASIC15.79■□□□□ 0.12
PGBD4Q96DM1 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 AC124068.2-201ENST00000569473 1109 ntBASIC15.79■□□□□ 0.12
PGBD4Q96DM1 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 LINC01165-201ENST00000445190 1623 ntBASIC15.79■□□□□ 0.12
PGBD4Q96DM1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PGBD4Q96DM1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms