Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LTAP01374 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
LTAP01374 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LTAP01374 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.04□□□□□ -0.64
LTAP01374 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.04□□□□□ -0.64
LTAP01374 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LTAP01374 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.04□□□□□ -0.64
LTAP01374 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.04□□□□□ -0.64
LTAP01374 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LTAP01374 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LTAP01374 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.03□□□□□ -0.64
LTAP01374 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.03□□□□□ -0.64
LTAP01374 DNAJB3-201ENST00000446806 729 ntBASIC11.03□□□□□ -0.64
LTAP01374 VDAC1P7-201ENST00000462417 847 ntBASIC11.03□□□□□ -0.64
LTAP01374 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC11.03□□□□□ -0.64
LTAP01374 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.03□□□□□ -0.64
LTAP01374 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 AL844908.2-201ENST00000609461 460 ntBASIC11.03□□□□□ -0.64
LTAP01374 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 AL662799.1-202ENST00000614205 422 ntBASIC11.03□□□□□ -0.64
LTAP01374 BAP1-211ENST00000615113 489 ntBASIC11.03□□□□□ -0.64
LTAP01374 AC024075.2-201ENST00000598112 1473 ntBASIC11.03□□□□□ -0.64
LTAP01374 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.03□□□□□ -0.64
LTAP01374 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.03□□□□□ -0.64
LTAP01374 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LTAP01374 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.02□□□□□ -0.64
LTAP01374 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LTAP01374 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LTAP01374 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LTAP01374 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
LTAP01374 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LTAP01374 PCDHB18P-202ENST00000526308 3197 ntBASIC11.02□□□□□ -0.64
LTAP01374 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LTAP01374 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LTAP01374 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.02□□□□□ -0.64
LTAP01374 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LTAP01374 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LTAP01374 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
LTAP01374 AGAP12P-201ENST00000585227 2359 ntBASIC11.02□□□□□ -0.65
LTAP01374 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.02□□□□□ -0.65
LTAP01374 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms