RNA–Protein interactions for RNA: ENST00000443980.6

NECAP2-202, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2 BASIC

Gene NECAP2, Length 1,929 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-202ENST00000443980 NISCHQ9Y2I1 1504 aa29.58■■■□□ 2.33
NECAP2-202ENST00000443980 CCDC180Q9P1Z9 1646 aa25.75■■□□□ 1.71
NECAP2-202ENST00000443980 ZCCHC6Q5VYS8 1495 aaKnown RBP24.88■■□□□ 1.57
NECAP2-202ENST00000443980 DCAF1Q9Y4B6 1507 aa24.5■■□□□ 1.51
NECAP2-202ENST00000443980 DCAF8L2P0C7V8 631 aa24.36■■□□□ 1.49
NECAP2-202ENST00000443980 ABCC9O60706 1549 aa24.22■■□□□ 1.47
NECAP2-202ENST00000443980 MYO15BQ96JP2 1530 aa24.18■■□□□ 1.46
NECAP2-202ENST00000443980 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
NECAP2-202ENST00000443980 NACADO15069 1562 aa23.97■■□□□ 1.43
NECAP2-202ENST00000443980 RB1CC1Q8TDY2 1594 aa23.73■■□□□ 1.39
NECAP2-202ENST00000443980 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
NECAP2-202ENST00000443980 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
NECAP2-202ENST00000443980 UNC13AQ9UPW8 1703 aa23.17■■□□□ 1.3
NECAP2-202ENST00000443980 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
NECAP2-202ENST00000443980 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
NECAP2-202ENST00000443980 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
NECAP2-202ENST00000443980 CECR2Q9BXF3 1484 aa22.95■■□□□ 1.26
NECAP2-202ENST00000443980 PABPN1Q86U42 306 aaKnown RBP eCLIP22.86■■□□□ 1.25
NECAP2-202ENST00000443980 BAZ1AQ9NRL2 1556 aaPredicted RBP22.85■■□□□ 1.25
NECAP2-202ENST00000443980 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
NECAP2-202ENST00000443980 SMARCA4P51532 1647 aa22.7■■□□□ 1.23
NECAP2-202ENST00000443980 HRCP23327 699 aa22.68■■□□□ 1.22
NECAP2-202ENST00000443980 WIZO95785 1651 aa22.63■■□□□ 1.21
NECAP2-202ENST00000443980 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
NECAP2-202ENST00000443980 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.18
NECAP2-202ENST00000443980 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
NECAP2-202ENST00000443980 SMARCA2P51531 1590 aa22.33■■□□□ 1.16
NECAP2-202ENST00000443980 ATAD2BQ9ULI0 1458 aa22.32■■□□□ 1.16
NECAP2-202ENST00000443980 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
NECAP2-202ENST00000443980 LOC105371045A0A1W2PR82 267 aa22.24■■□□□ 1.15
NECAP2-202ENST00000443980 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
NECAP2-202ENST00000443980 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
NECAP2-202ENST00000443980 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
NECAP2-202ENST00000443980 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
NECAP2-202ENST00000443980 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
NECAP2-202ENST00000443980 PPARGC1BQ86YN6 1023 aaKnown RBP21.97■■□□□ 1.11
NECAP2-202ENST00000443980 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
NECAP2-202ENST00000443980 CC2D2AQ9P2K1 1620 aa21.93■■□□□ 1.1
NECAP2-202ENST00000443980 ZEB1P37275 1124 aaPredicted RBP21.84■■□□□ 1.09
NECAP2-202ENST00000443980 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
NECAP2-202ENST00000443980 CFTRP13569 1480 aa21.66■■□□□ 1.06
NECAP2-202ENST00000443980 WRNQ14191 1432 aaPredicted RBP eCLIP21.65■■□□□ 1.062e-6■■■■□ 22.3
NECAP2-202ENST00000443980 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
NECAP2-202ENST00000443980 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
NECAP2-202ENST00000443980 SYNJ1O43426 1573 aa21.52■■□□□ 1.04
NECAP2-202ENST00000443980 PRDM2Q13029 1718 aa21.5■■□□□ 1.03
NECAP2-202ENST00000443980 TOP2BQ02880 1626 aa21.45■■□□□ 1.02
NECAP2-202ENST00000443980 EEA1Q15075 1411 aa21.43■■□□□ 1.02
NECAP2-202ENST00000443980 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
NECAP2-202ENST00000443980 SOGA1O94964 1423 aa21.38■■□□□ 1.01
NECAP2-202ENST00000443980 CUX1P39880 1505 aa21.35■■□□□ 1.01
NECAP2-202ENST00000443980 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
NECAP2-202ENST00000443980 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
NECAP2-202ENST00000443980 FANCD2Q9BXW9 1451 aa21.32■■□□□ 1
NECAP2-202ENST00000443980 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
NECAP2-202ENST00000443980 NESP48681 1621 aa21.29■■□□□ 1
NECAP2-202ENST00000443980 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
NECAP2-202ENST00000443980 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
NECAP2-202ENST00000443980 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
NECAP2-202ENST00000443980 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
NECAP2-202ENST00000443980 DNMBPQ6XZF7 1577 aa21.15■□□□□ 0.98
NECAP2-202ENST00000443980 GOLGA3Q08378 1498 aa21.11■□□□□ 0.97
NECAP2-202ENST00000443980 FGD5Q6ZNL6 1462 aa21.11■□□□□ 0.97
NECAP2-202ENST00000443980 KIF21BO75037 1637 aa21.1■□□□□ 0.97
NECAP2-202ENST00000443980 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
NECAP2-202ENST00000443980 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
NECAP2-202ENST00000443980 TNIKQ9UKE5 1360 aa21.09■□□□□ 0.97
NECAP2-202ENST00000443980 CCER1Q8TC90 406 aaPredicted RBP21.08■□□□□ 0.97
NECAP2-202ENST00000443980 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
NECAP2-202ENST00000443980 URB2Q14146 1524 aaKnown RBP21.03■□□□□ 0.96
NECAP2-202ENST00000443980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.03■□□□□ 0.96
NECAP2-202ENST00000443980 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
NECAP2-202ENST00000443980 CUX2O14529 1486 aa21■□□□□ 0.95
NECAP2-202ENST00000443980 PELP1Q8IZL8 1130 aaKnown RBP21■□□□□ 0.95
NECAP2-202ENST00000443980 POLA1P09884 1462 aaPredicted RBP20.99■□□□□ 0.95
NECAP2-202ENST00000443980 UBTFP17480 764 aaKnown RBP20.99■□□□□ 0.95
NECAP2-202ENST00000443980 PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
NECAP2-202ENST00000443980 ERICH3Q5RHP9 1530 aa20.96■□□□□ 0.95
NECAP2-202ENST00000443980 RAPGEF2Q9Y4G8 1499 aa20.95■□□□□ 0.94
NECAP2-202ENST00000443980 ABCA10Q8WWZ4 1543 aa20.95■□□□□ 0.94
NECAP2-202ENST00000443980 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
NECAP2-202ENST00000443980 RAD54L2Q9Y4B4 1467 aa20.91■□□□□ 0.94
NECAP2-202ENST00000443980 MRC2Q9UBG0 1479 aa20.9■□□□□ 0.94
NECAP2-202ENST00000443980 IGF1RP08069 1367 aa20.89■□□□□ 0.94
NECAP2-202ENST00000443980 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
NECAP2-202ENST00000443980 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
NECAP2-202ENST00000443980 CARMIL1Q5VZK9 1371 aa20.79■□□□□ 0.92
NECAP2-202ENST00000443980 WDR62O43379 1518 aa20.79■□□□□ 0.92
NECAP2-202ENST00000443980 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
NECAP2-202ENST00000443980 CLIP1P30622 1438 aa20.77■□□□□ 0.91
NECAP2-202ENST00000443980 ACIN1Q9UKV3 1341 aaKnown RBP20.76■□□□□ 0.91
NECAP2-202ENST00000443980 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
NECAP2-202ENST00000443980 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
NECAP2-202ENST00000443980 TTBK1Q5TCY1 1321 aaPredicted RBP20.73■□□□□ 0.91
NECAP2-202ENST00000443980 CUL7Q14999 1698 aa20.72■□□□□ 0.91
NECAP2-202ENST00000443980 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
NECAP2-202ENST00000443980 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
NECAP2-202ENST00000443980 CENPBP07199 599 aaPredicted RBP20.7■□□□□ 0.91
NECAP2-202ENST00000443980 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
NECAP2-202ENST00000443980 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms