Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TMEM198B-204ENST00000484016 896 ntBASIC15.97■□□□□ 0.15
CCDC66A2RUB6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 AC067863.1-201ENST00000494933 530 ntBASIC15.97■□□□□ 0.15
CCDC66A2RUB6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
CCDC66A2RUB6 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.96■□□□□ 0.15
CCDC66A2RUB6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.96■□□□□ 0.15
CCDC66A2RUB6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 AC093028.1-201ENST00000622998 982 ntBASIC15.96■□□□□ 0.15
CCDC66A2RUB6 AC134407.3-201ENST00000624035 2139 ntBASIC15.96■□□□□ 0.15
CCDC66A2RUB6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC66A2RUB6 BTBD7P1-201ENST00000447253 1453 ntBASIC15.96■□□□□ 0.14
CCDC66A2RUB6 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC15.96■□□□□ 0.14
CCDC66A2RUB6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC66A2RUB6 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC66A2RUB6 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 AC100757.3-201ENST00000622361 1406 ntBASIC15.95■□□□□ 0.14
CCDC66A2RUB6 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 AL157414.3-201ENST00000624276 1954 ntBASIC15.95■□□□□ 0.14
CCDC66A2RUB6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 MEIS3P1-201ENST00000495167 958 ntBASIC15.95■□□□□ 0.14
CCDC66A2RUB6 AC097493.3-201ENST00000509725 367 ntBASIC15.95■□□□□ 0.14
CCDC66A2RUB6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms