RNA–Protein interactions for RNA: ENST00000455775.6

FOXP3-204, Transcript of forkhead box P3, humanhuman

TSL 5 BASIC

Gene FOXP3, Length 2,448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3-204ENST00000455775 NISCHQ9Y2I1 1504 aa28.92■■■□□ 2.22
FOXP3-204ENST00000455775 CCDC180Q9P1Z9 1646 aa25.37■■□□□ 1.65
FOXP3-204ENST00000455775 ABCC9O60706 1549 aa24.68■■□□□ 1.54
FOXP3-204ENST00000455775 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
FOXP3-204ENST00000455775 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
FOXP3-204ENST00000455775 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
FOXP3-204ENST00000455775 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
FOXP3-204ENST00000455775 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
FOXP3-204ENST00000455775 NACADO15069 1562 aa23.77■■□□□ 1.4
FOXP3-204ENST00000455775 RB1CC1Q8TDY2 1594 aa23.75■■□□□ 1.39
FOXP3-204ENST00000455775 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
FOXP3-204ENST00000455775 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
FOXP3-204ENST00000455775 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
FOXP3-204ENST00000455775 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
FOXP3-204ENST00000455775 PABPN1Q86U42 306 aaKnown RBP eCLIP23.09■■□□□ 1.29
FOXP3-204ENST00000455775 HRCP23327 699 aa23.07■■□□□ 1.28
FOXP3-204ENST00000455775 BICRAQ9NZM4 1560 aa23.04■■□□□ 1.28
FOXP3-204ENST00000455775 PCGF6Q9BYE7 350 aa22.78■■□□□ 1.24
FOXP3-204ENST00000455775 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
FOXP3-204ENST00000455775 PPARGC1BQ86YN6 1023 aaKnown RBP22.55■■□□□ 1.2
FOXP3-204ENST00000455775 LOC105371045A0A1W2PR82 267 aa22.49■■□□□ 1.19
FOXP3-204ENST00000455775 CECR2Q9BXF3 1484 aa22.43■■□□□ 1.18
FOXP3-204ENST00000455775 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
FOXP3-204ENST00000455775 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
FOXP3-204ENST00000455775 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
FOXP3-204ENST00000455775 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
FOXP3-204ENST00000455775 MROH2BQ7Z745 1585 aa22.27■■□□□ 1.16
FOXP3-204ENST00000455775 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
FOXP3-204ENST00000455775 TRIM26Q12899 539 aaPredicted RBP22.26■■□□□ 1.15
FOXP3-204ENST00000455775 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
FOXP3-204ENST00000455775 PEG3Q9GZU2 1588 aa22.05■■□□□ 1.12
FOXP3-204ENST00000455775 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
FOXP3-204ENST00000455775 WIZO95785 1651 aa22.03■■□□□ 1.12
FOXP3-204ENST00000455775 TRIM41Q8WV44 630 aa22■■□□□ 1.11
FOXP3-204ENST00000455775 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
FOXP3-204ENST00000455775 ZEB1P37275 1124 aaPredicted RBP21.92■■□□□ 1.1
FOXP3-204ENST00000455775 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
FOXP3-204ENST00000455775 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
FOXP3-204ENST00000455775 HMGXB3Q12766 1538 aa21.86■■□□□ 1.09
FOXP3-204ENST00000455775 FAM9AQ8IZU1 332 aaPredicted RBP21.81■■□□□ 1.08
FOXP3-204ENST00000455775 CCDC88BA6NC98 1476 aa21.65■■□□□ 1.06
FOXP3-204ENST00000455775 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
FOXP3-204ENST00000455775 SCAF1Q9H7N4 1312 aaKnown RBP21.5■■□□□ 1.03
FOXP3-204ENST00000455775 PELP1Q8IZL8 1130 aaKnown RBP21.43■■□□□ 1.02
FOXP3-204ENST00000455775 NESP48681 1621 aa21.39■■□□□ 1.02
FOXP3-204ENST00000455775 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
FOXP3-204ENST00000455775 CFTRP13569 1480 aa21.34■■□□□ 1.01
FOXP3-204ENST00000455775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.31■■□□□ 1
FOXP3-204ENST00000455775 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
FOXP3-204ENST00000455775 ABCC8Q09428 1581 aa21.29■■□□□ 1
FOXP3-204ENST00000455775 CCER1Q8TC90 406 aaPredicted RBP21.26■□□□□ 0.99
FOXP3-204ENST00000455775 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
FOXP3-204ENST00000455775 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
FOXP3-204ENST00000455775 EEA1Q15075 1411 aa21.17■□□□□ 0.98
FOXP3-204ENST00000455775 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
FOXP3-204ENST00000455775 ACIN1Q9UKV3 1341 aaKnown RBP21.15■□□□□ 0.98
FOXP3-204ENST00000455775 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
FOXP3-204ENST00000455775 TNIKQ9UKE5 1360 aa21.13■□□□□ 0.97
FOXP3-204ENST00000455775 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
FOXP3-204ENST00000455775 SOGA1O94964 1423 aa21.1■□□□□ 0.97
FOXP3-204ENST00000455775 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
FOXP3-204ENST00000455775 FANCD2Q9BXW9 1451 aa21.09■□□□□ 0.97
FOXP3-204ENST00000455775 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
FOXP3-204ENST00000455775 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
FOXP3-204ENST00000455775 CSRNP3Q8WYN3 585 aa21.04■□□□□ 0.96
FOXP3-204ENST00000455775 THOC2Q8NI27 1593 aaKnown RBP21.03■□□□□ 0.96
FOXP3-204ENST00000455775 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.96
FOXP3-204ENST00000455775 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.95
FOXP3-204ENST00000455775 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
FOXP3-204ENST00000455775 GOLGA3Q08378 1498 aa20.98■□□□□ 0.95
FOXP3-204ENST00000455775 CUX2O14529 1486 aa20.97■□□□□ 0.95
FOXP3-204ENST00000455775 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.94
FOXP3-204ENST00000455775 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
FOXP3-204ENST00000455775 UBTFP17480 764 aaKnown RBP20.91■□□□□ 0.94
FOXP3-204ENST00000455775 GTF3C3Q9Y5Q9 886 aa20.9■□□□□ 0.94
FOXP3-204ENST00000455775 WDR62O43379 1518 aa20.88■□□□□ 0.93
FOXP3-204ENST00000455775 KIF21BO75037 1637 aa20.88■□□□□ 0.93
FOXP3-204ENST00000455775 CUX1P39880 1505 aa20.86■□□□□ 0.93
FOXP3-204ENST00000455775 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
FOXP3-204ENST00000455775 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
FOXP3-204ENST00000455775 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.93
FOXP3-204ENST00000455775 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
FOXP3-204ENST00000455775 BIVM-ERCC5R4GMW8 1640 aa20.82■□□□□ 0.92
FOXP3-204ENST00000455775 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
FOXP3-204ENST00000455775 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
FOXP3-204ENST00000455775 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
FOXP3-204ENST00000455775 CLIP1P30622 1438 aa20.7■□□□□ 0.9
FOXP3-204ENST00000455775 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
FOXP3-204ENST00000455775 VPS8Q8N3P4 1428 aa20.67■□□□□ 0.9
FOXP3-204ENST00000455775 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
FOXP3-204ENST00000455775 RAPGEF2Q9Y4G8 1499 aa20.61■□□□□ 0.89
FOXP3-204ENST00000455775 KIF27Q86VH2 1401 aa20.59■□□□□ 0.89
FOXP3-204ENST00000455775 YTHDC1Q96MU7 727 aaKnown RBP20.58■□□□□ 0.89
FOXP3-204ENST00000455775 MIER1Q8N108 512 aa20.58■□□□□ 0.88
FOXP3-204ENST00000455775 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
FOXP3-204ENST00000455775 ABCA10Q8WWZ4 1543 aa20.56■□□□□ 0.88
FOXP3-204ENST00000455775 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
FOXP3-204ENST00000455775 APLP2Q06481 763 aa20.54■□□□□ 0.88
FOXP3-204ENST00000455775 ERICH3Q5RHP9 1530 aa20.52■□□□□ 0.88
FOXP3-204ENST00000455775 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms