RNA–Protein interactions for RNA: ENST00000373894.7

SMPDL3B-202, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-202ENST00000373894 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
SMPDL3B-202ENST00000373894 CCDC180Q9P1Z9 1646 aa26.3■■□□□ 1.8
SMPDL3B-202ENST00000373894 ZCCHC6Q5VYS8 1495 aaKnown RBP25.25■■□□□ 1.63
SMPDL3B-202ENST00000373894 ABCC9O60706 1549 aa24.88■■□□□ 1.57
SMPDL3B-202ENST00000373894 DCAF1Q9Y4B6 1507 aa24.84■■□□□ 1.57
SMPDL3B-202ENST00000373894 DCAF8L2P0C7V8 631 aa24.79■■□□□ 1.56
SMPDL3B-202ENST00000373894 MYO15BQ96JP2 1530 aa24.57■■□□□ 1.52
SMPDL3B-202ENST00000373894 NACADO15069 1562 aa24.46■■□□□ 1.51
SMPDL3B-202ENST00000373894 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.5
SMPDL3B-202ENST00000373894 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
SMPDL3B-202ENST00000373894 SCRIBQ14160 1630 aa24.17■■□□□ 1.46
SMPDL3B-202ENST00000373894 UNC13AQ9UPW8 1703 aa23.88■■□□□ 1.41
SMPDL3B-202ENST00000373894 BICRAQ9NZM4 1560 aa23.56■■□□□ 1.36
SMPDL3B-202ENST00000373894 SUPT5HO00267 1087 aaKnown RBP23.45■■□□□ 1.35
SMPDL3B-202ENST00000373894 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.34
SMPDL3B-202ENST00000373894 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
SMPDL3B-202ENST00000373894 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
SMPDL3B-202ENST00000373894 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
SMPDL3B-202ENST00000373894 MROH2BQ7Z745 1585 aa23.22■■□□□ 1.31
SMPDL3B-202ENST00000373894 SMARCA4P51532 1647 aa23.16■■□□□ 1.3
SMPDL3B-202ENST00000373894 WIZO95785 1651 aa23.06■■□□□ 1.28
SMPDL3B-202ENST00000373894 EIF4G1Q04637 1599 aaKnown RBP22.86■■□□□ 1.25
SMPDL3B-202ENST00000373894 PEG3Q9GZU2 1588 aa22.86■■□□□ 1.25
SMPDL3B-202ENST00000373894 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
SMPDL3B-202ENST00000373894 TOP2AP11388 1531 aaKnown RBP22.8■■□□□ 1.24
SMPDL3B-202ENST00000373894 SMARCA2P51531 1590 aa22.75■■□□□ 1.23
SMPDL3B-202ENST00000373894 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
SMPDL3B-202ENST00000373894 BAZ1BQ9UIG0 1483 aaKnown RBP22.63■■□□□ 1.21
SMPDL3B-202ENST00000373894 HMGXB3Q12766 1538 aa22.56■■□□□ 1.2
SMPDL3B-202ENST00000373894 CC2D2AQ9P2K1 1620 aa22.55■■□□□ 1.2
SMPDL3B-202ENST00000373894 NCAPD3P42695 1498 aa22.54■■□□□ 1.2
SMPDL3B-202ENST00000373894 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
SMPDL3B-202ENST00000373894 HRCP23327 699 aa22.45■■□□□ 1.18
SMPDL3B-202ENST00000373894 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.18
SMPDL3B-202ENST00000373894 ABCC8Q09428 1581 aa22.09■■□□□ 1.13
SMPDL3B-202ENST00000373894 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
SMPDL3B-202ENST00000373894 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
SMPDL3B-202ENST00000373894 CFTRP13569 1480 aa22.04■■□□□ 1.12
SMPDL3B-202ENST00000373894 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
SMPDL3B-202ENST00000373894 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
SMPDL3B-202ENST00000373894 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
SMPDL3B-202ENST00000373894 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
SMPDL3B-202ENST00000373894 LAMC3Q9Y6N6 1575 aa21.84■■□□□ 1.09
SMPDL3B-202ENST00000373894 NESP48681 1621 aa21.83■■□□□ 1.09
SMPDL3B-202ENST00000373894 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
SMPDL3B-202ENST00000373894 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.08
SMPDL3B-202ENST00000373894 FANCD2Q9BXW9 1451 aa21.75■■□□□ 1.07
SMPDL3B-202ENST00000373894 CUX1P39880 1505 aa21.72■■□□□ 1.07
SMPDL3B-202ENST00000373894 PCGF6Q9BYE7 350 aa21.69■■□□□ 1.06
SMPDL3B-202ENST00000373894 PPARGC1BQ86YN6 1023 aaKnown RBP21.65■■□□□ 1.06
SMPDL3B-202ENST00000373894 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
SMPDL3B-202ENST00000373894 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
SMPDL3B-202ENST00000373894 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
SMPDL3B-202ENST00000373894 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
SMPDL3B-202ENST00000373894 SOGA1O94964 1423 aa21.61■■□□□ 1.05
SMPDL3B-202ENST00000373894 DNMBPQ6XZF7 1577 aa21.56■■□□□ 1.04
SMPDL3B-202ENST00000373894 EEA1Q15075 1411 aa21.54■■□□□ 1.04
SMPDL3B-202ENST00000373894 RUSC2Q8N2Y8 1516 aa21.54■■□□□ 1.04
SMPDL3B-202ENST00000373894 LOC105371045A0A1W2PR82 267 aa21.53■■□□□ 1.04
SMPDL3B-202ENST00000373894 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
SMPDL3B-202ENST00000373894 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
SMPDL3B-202ENST00000373894 URB2Q14146 1524 aaKnown RBP21.48■■□□□ 1.03
SMPDL3B-202ENST00000373894 POLA1P09884 1462 aaPredicted RBP21.4■■□□□ 1.02
SMPDL3B-202ENST00000373894 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
SMPDL3B-202ENST00000373894 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
SMPDL3B-202ENST00000373894 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
SMPDL3B-202ENST00000373894 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
SMPDL3B-202ENST00000373894 KIF27Q86VH2 1401 aa21.35■■□□□ 1.01
SMPDL3B-202ENST00000373894 CUX2O14529 1486 aa21.33■■□□□ 1.01
SMPDL3B-202ENST00000373894 KIF21BO75037 1637 aa21.32■■□□□ 1
SMPDL3B-202ENST00000373894 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
SMPDL3B-202ENST00000373894 WDR97A6NE52 1622 aa21.3■■□□□ 1
SMPDL3B-202ENST00000373894 WDR62O43379 1518 aa21.3■■□□□ 1
SMPDL3B-202ENST00000373894 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
SMPDL3B-202ENST00000373894 THOC2Q8NI27 1593 aaKnown RBP21.28■■□□□ 1
SMPDL3B-202ENST00000373894 MYT1Q01538 1121 aa21.27■■□□□ 1
SMPDL3B-202ENST00000373894 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
SMPDL3B-202ENST00000373894 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
SMPDL3B-202ENST00000373894 TRIM26Q12899 539 aaPredicted RBP21.22■□□□□ 0.99
SMPDL3B-202ENST00000373894 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
SMPDL3B-202ENST00000373894 PRXQ9BXM0 1461 aa21.19■□□□□ 0.98
SMPDL3B-202ENST00000373894 RAPGEF2Q9Y4G8 1499 aa21.19■□□□□ 0.98
SMPDL3B-202ENST00000373894 ERICH3Q5RHP9 1530 aa21.18■□□□□ 0.98
SMPDL3B-202ENST00000373894 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
SMPDL3B-202ENST00000373894 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
SMPDL3B-202ENST00000373894 TNIKQ9UKE5 1360 aa21.14■□□□□ 0.98
SMPDL3B-202ENST00000373894 IGF1RP08069 1367 aa21.14■□□□□ 0.97
SMPDL3B-202ENST00000373894 UBTFP17480 764 aaKnown RBP21.13■□□□□ 0.97
SMPDL3B-202ENST00000373894 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
SMPDL3B-202ENST00000373894 IFT140Q96RY7 1462 aa21.09■□□□□ 0.97
SMPDL3B-202ENST00000373894 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
SMPDL3B-202ENST00000373894 CUL7Q14999 1698 aa21.08■□□□□ 0.97
SMPDL3B-202ENST00000373894 CEP162Q5TB80 1403 aa21.06■□□□□ 0.96
SMPDL3B-202ENST00000373894 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
SMPDL3B-202ENST00000373894 CARMIL1Q5VZK9 1371 aa21.05■□□□□ 0.96
SMPDL3B-202ENST00000373894 ZNF608Q9ULD9 1512 aaPredicted RBP21■□□□□ 0.95
SMPDL3B-202ENST00000373894 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.95
SMPDL3B-202ENST00000373894 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
SMPDL3B-202ENST00000373894 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
SMPDL3B-202ENST00000373894 CLIP1P30622 1438 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms