RNA–Protein interactions for RNA: ENST00000541464.5

TMC5-204, Transcript of transmembrane channel like 5, human

TSL 2 BASIC

Gene TMC5, Length 3,581 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC5-204	ENST00000541464	NISCH	Q9Y2I1	1504 aa		23.84	■■□□□ 1.41
TMC5-204	ENST00000541464	HRC	P23327	699 aa		21.99	■■□□□ 1.11
TMC5-204	ENST00000541464	PCGF6	Q9BYE7	350 aa		21.92	■■□□□ 1.1
TMC5-204	ENST00000541464	PPARGC1B	Q86YN6	1023 aa	Known RBP	21.89	■■□□□ 1.09
TMC5-204	ENST00000541464	SUPT5H	O00267	1087 aa	Known RBP	21.87	■■□□□ 1.09
TMC5-204	ENST00000541464	PELP1	Q8IZL8	1130 aa	Known RBP	21.71	■■□□□ 1.07
TMC5-204	ENST00000541464	SHROOM4	Q9ULL8	1493 aa		21.66	■■□□□ 1.06
TMC5-204	ENST00000541464	SCAF1	Q9H7N4	1312 aa	Known RBP	21.01	■□□□□ 0.95
TMC5-204	ENST00000541464	MYT1	Q01538	1121 aa		20.93	■□□□□ 0.94
TMC5-204	ENST00000541464	CHIC1	Q5VXU3	224 aa		20.93	■□□□□ 0.94
TMC5-204	ENST00000541464	LOC105371045	A0A1W2PR82	267 aa		20.86	■□□□□ 0.93
TMC5-204	ENST00000541464	DCAF8L2	P0C7V8	631 aa		20.77	■□□□□ 0.92
TMC5-204	ENST00000541464	TRIM26	Q12899	539 aa	Predicted RBP	20.76	■□□□□ 0.91
TMC5-204	ENST00000541464	MYO15B	Q96JP2	1530 aa		20.74	■□□□□ 0.91
TMC5-204	ENST00000541464	EHMT2	Q96KQ7	1210 aa		20.72	■□□□□ 0.91
TMC5-204	ENST00000541464	ZEB1	P37275	1124 aa	Predicted RBP	20.7	■□□□□ 0.9
TMC5-204	ENST00000541464	GTF3C3	Q9Y5Q9	886 aa		20.57	■□□□□ 0.88
TMC5-204	ENST00000541464	CCDC180	Q9P1Z9	1646 aa		20.54	■□□□□ 0.88
TMC5-204	ENST00000541464	CENPB	P07199	599 aa	Predicted RBP	20.54	■□□□□ 0.88
TMC5-204	ENST00000541464	ACIN1	Q9UKV3	1341 aa	Known RBP	20.48	■□□□□ 0.87
TMC5-204	ENST00000541464	NEUROD1	Q13562	356 aa		20.47	■□□□□ 0.87
TMC5-204	ENST00000541464	FAM9A	Q8IZU1	332 aa	Predicted RBP	20.42	■□□□□ 0.86
TMC5-204	ENST00000541464	YTHDC1	Q96MU7	727 aa	Known RBP	20.42	■□□□□ 0.86
TMC5-204	ENST00000541464	CCER1	Q8TC90	406 aa	Predicted RBP	20.31	■□□□□ 0.84
TMC5-204	ENST00000541464	DCAF1	Q9Y4B6	1507 aa		20.23	■□□□□ 0.83
TMC5-204	ENST00000541464	TTBK1	Q5TCY1	1321 aa	Predicted RBP	20.21	■□□□□ 0.83
TMC5-204	ENST00000541464	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	20.2	■□□□□ 0.82
TMC5-204	ENST00000541464	DIEXF	Q68CQ4	756 aa	Known RBP	20.19	■□□□□ 0.82
TMC5-204	ENST00000541464	ZCCHC6	Q5VYS8	1495 aa	Known RBP	20.12	■□□□□ 0.81
TMC5-204	ENST00000541464	TRIM41	Q8WV44	630 aa		19.96	■□□□□ 0.79
TMC5-204	ENST00000541464	BCL11A	Q9H165	835 aa		19.7	■□□□□ 0.74
TMC5-204	ENST00000541464	ZNF316	A6NFI3	1004 aa	Predicted RBP	19.59	■□□□□ 0.73
TMC5-204	ENST00000541464	MIER1	Q8N108	512 aa		19.56	■□□□□ 0.72
TMC5-204	ENST00000541464	BCAN	Q96GW7	911 aa		19.49	■□□□□ 0.71
TMC5-204	ENST00000541464	ANP32E	Q9BTT0	268 aa		19.48	■□□□□ 0.71
TMC5-204	ENST00000541464	HNRNPUL2	Q1KMD3	747 aa	Known RBP	19.38	■□□□□ 0.69
TMC5-204	ENST00000541464	CSRNP3	Q8WYN3	585 aa		19.36	■□□□□ 0.69
TMC5-204	ENST00000541464	ERICH6	Q7L0X2	663 aa		19.31	■□□□□ 0.68
TMC5-204	ENST00000541464	SUPT16H	Q9Y5B9	1047 aa	Known RBP	19.27	■□□□□ 0.68
TMC5-204	ENST00000541464	TSHZ2	Q9NRE2	1034 aa		19.23	■□□□□ 0.67
TMC5-204	ENST00000541464	ABCC9	O60706	1549 aa		19.21	■□□□□ 0.67
TMC5-204	ENST00000541464	UBTF	P17480	764 aa	Known RBP	19.16	■□□□□ 0.66
TMC5-204	ENST00000541464	RANGAP1	P46060	587 aa	Predicted RBP	19.14	■□□□□ 0.65
TMC5-204	ENST00000541464	NEFL	P07196	543 aa		19.13	■□□□□ 0.65
TMC5-204	ENST00000541464	SCRIB	Q14160	1630 aa		19.1	■□□□□ 0.65
TMC5-204	ENST00000541464	FKBP8	Q14318	412 aa		19.07	■□□□□ 0.64
TMC5-204	ENST00000541464	APLP2	Q06481	763 aa		19.04	■□□□□ 0.64
TMC5-204	ENST00000541464	ITGAE	P38570	1179 aa		19.02	■□□□□ 0.63
TMC5-204	ENST00000541464	NACAD	O15069	1562 aa		18.98	■□□□□ 0.63
TMC5-204	ENST00000541464	CLSPN	Q9HAW4	1339 aa		18.95	■□□□□ 0.62
TMC5-204	ENST00000541464	PRKCSH	P14314	528 aa	Predicted RBP	18.94	■□□□□ 0.62
TMC5-204	ENST00000541464	RBM19	Q9Y4C8	960 aa	Known RBP	18.87	■□□□□ 0.61
TMC5-204	ENST00000541464	TRIM52	Q96A61	297 aa		18.76	■□□□□ 0.59
TMC5-204	ENST00000541464	KCNH8	Q96L42	1107 aa		18.75	■□□□□ 0.59
TMC5-204	ENST00000541464	UNC13A	Q9UPW8	1703 aa		18.75	■□□□□ 0.59
TMC5-204	ENST00000541464	RB1CC1	Q8TDY2	1594 aa		18.74	■□□□□ 0.59
TMC5-204	ENST00000541464	NBR1	Q14596	966 aa		18.7	■□□□□ 0.58
TMC5-204	ENST00000541464	IRX6	P78412	446 aa	Predicted RBP	18.69	■□□□□ 0.58
TMC5-204	ENST00000541464	CDK11A	Q9UQ88	783 aa	Predicted RBP	18.68	■□□□□ 0.58
TMC5-204	ENST00000541464	RSF1	Q96T23	1441 aa	Predicted RBP	18.68	■□□□□ 0.58
TMC5-204	ENST00000541464	DDX10	Q13206	875 aa	Known RBP	18.65	■□□□□ 0.58
TMC5-204	ENST00000541464	CECR2	Q9BXF3	1484 aa		18.65	■□□□□ 0.58
TMC5-204	ENST00000541464	CEP162	Q5TB80	1403 aa		18.62	■□□□□ 0.57
TMC5-204	ENST00000541464	DEK	P35659	375 aa	Known RBP	18.61	■□□□□ 0.57
TMC5-204	ENST00000541464	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.56	■□□□□ 0.56
TMC5-204	ENST00000541464	RTN4	Q9NQC3	1192 aa	Known RBP	18.55	■□□□□ 0.56
TMC5-204	ENST00000541464	MROH2B	Q7Z745	1585 aa		18.54	■□□□□ 0.56
TMC5-204	ENST00000541464	HIRIP3	Q9BW71	556 aa	Predicted RBP	18.54	■□□□□ 0.56
TMC5-204	ENST00000541464	RTL5	Q5HYW3	569 aa	Predicted RBP	18.53	■□□□□ 0.56
TMC5-204	ENST00000541464	MSH5	O43196	834 aa		18.52	■□□□□ 0.56
TMC5-204	ENST00000541464	CCDC136	Q96JN2	1154 aa		18.51	■□□□□ 0.55
TMC5-204	ENST00000541464	WIZ	O95785	1651 aa		18.46	■□□□□ 0.55
TMC5-204	ENST00000541464	ANP32C	O43423	234 aa		18.45	■□□□□ 0.54
TMC5-204	ENST00000541464	BICRA	Q9NZM4	1560 aa		18.44	■□□□□ 0.54
TMC5-204	ENST00000541464	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.41	■□□□□ 0.54
TMC5-204	ENST00000541464	EIF5B	O60841	1220 aa	Known RBP	18.41	■□□□□ 0.54
TMC5-204	ENST00000541464	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.39	■□□□□ 0.53
TMC5-204	ENST00000541464	MYT1L	Q9UL68	1186 aa		18.39	■□□□□ 0.53
TMC5-204	ENST00000541464	CNGB1	Q14028	1251 aa	Predicted RBP	18.35	■□□□□ 0.53
TMC5-204	ENST00000541464	SALL2	Q9Y467	1007 aa	Predicted RBP	18.34	■□□□□ 0.53
TMC5-204	ENST00000541464	TNIK	Q9UKE5	1360 aa		18.32	■□□□□ 0.52
TMC5-204	ENST00000541464	WRN	Q14191	1432 aa	Predicted RBP eCLIP	18.31	■□□□□ 0.52
TMC5-204	ENST00000541464	SOGA1	O94964	1423 aa		18.29	■□□□□ 0.52
TMC5-204	ENST00000541464	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	18.29	■□□□□ 0.52
TMC5-204	ENST00000541464	SMARCA4	P51532	1647 aa		18.28	■□□□□ 0.52
TMC5-204	ENST00000541464	B4GALNT3	Q6L9W6	998 aa		18.25	■□□□□ 0.51
TMC5-204	ENST00000541464	NOP58	Q9Y2X3	529 aa	Known RBP	18.25	■□□□□ 0.51
TMC5-204	ENST00000541464	NPM2	Q86SE8	214 aa	Known RBP	18.25	■□□□□ 0.51
TMC5-204	ENST00000541464	FANCI	Q9NVI1	1328 aa		18.24	■□□□□ 0.51
TMC5-204	ENST00000541464	ATP1B4	Q9UN42	357 aa	Predicted RBP	18.23	■□□□□ 0.51
TMC5-204	ENST00000541464	PABPN1	Q86U42	306 aa	Known RBP eCLIP	18.22	■□□□□ 0.51
TMC5-204	ENST00000541464	ANP32A	P39687	249 aa	Known RBP	18.22	■□□□□ 0.51
TMC5-204	ENST00000541464	CCDC88B	A6NC98	1476 aa		18.2	■□□□□ 0.5
TMC5-204	ENST00000541464	DHX57	Q6P158	1386 aa	Known RBP	18.18	■□□□□ 0.5
TMC5-204	ENST00000541464	CLIP1	P30622	1438 aa		18.18	■□□□□ 0.5
TMC5-204	ENST00000541464	SIN3A	Q96ST3	1273 aa		18.17	■□□□□ 0.5
TMC5-204	ENST00000541464	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.17	■□□□□ 0.5
TMC5-204	ENST00000541464	IL27	Q8NEV9	243 aa		18.17	■□□□□ 0.5
TMC5-204	ENST00000541464	EIF4G1	Q04637	1599 aa	Known RBP	18.15	■□□□□ 0.5
TMC5-204	ENST00000541464	FAM50A	Q14320	339 aa	Known RBP	18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms