Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH13P55290 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH13P55290 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 SPCS2P1-201ENST00000561636 679 ntBASIC14.36□□□□□ -0.11
CDH13P55290 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 TP53TG3HP-202ENST00000569755 579 ntBASIC14.36□□□□□ -0.11
CDH13P55290 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH13P55290 RPSAP52-203ENST00000622976 1023 ntBASIC14.36□□□□□ -0.11
CDH13P55290 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH13P55290 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CDH13P55290 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH13P55290 AC087386.2-201ENST00000623212 4637 ntBASIC14.35□□□□□ -0.11
CDH13P55290 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CDH13P55290 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CDH13P55290 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
CDH13P55290 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDH13P55290 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH13P55290 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH13P55290 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 FTLP10-202ENST00000505798 471 ntBASIC14.35□□□□□ -0.11
CDH13P55290 TDH-203ENST00000531764 1110 ntBASIC14.35□□□□□ -0.11
CDH13P55290 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH13P55290 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH13P55290 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH13P55290 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH13P55290 BX088702.1-201ENST00000610784 235 ntBASIC14.35□□□□□ -0.11
CDH13P55290 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH13P55290 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH13P55290 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH13P55290 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CDH13P55290 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH13P55290 AC111170.3-201ENST00000624282 2464 ntBASIC14.35□□□□□ -0.11
CDH13P55290 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH13P55290 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH13P55290 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDH13P55290 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDH13P55290 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CDH13P55290 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH13P55290 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDH13P55290 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.34□□□□□ -0.11
CDH13P55290 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms